RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 ERC1Q8IUD2 1116 aa8.73□□□□□ -1.01
DDX60-201ENST00000393743 RBM19Q9Y4C8 960 aaKnown RBP8.73□□□□□ -1.01
DDX60-201ENST00000393743 APAF1O14727 1248 aa8.73□□□□□ -1.01
DDX60-201ENST00000393743 TATP17735 454 aaPredicted RBP8.73□□□□□ -1.01
DDX60-201ENST00000393743 RRP1P56182 461 aaKnown RBP8.73□□□□□ -1.01
DDX60-201ENST00000393743 SART3Q15020 963 aaKnown RBP8.73□□□□□ -1.01
DDX60-201ENST00000393743 GNL3LQ9NVN8 582 aaKnown RBP8.72□□□□□ -1.01
DDX60-201ENST00000393743 R3HCC1Q9Y3T6 440 aaKnown RBP8.72□□□□□ -1.01
DDX60-201ENST00000393743 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
DDX60-201ENST00000393743 GPS2Q13227 327 aa8.72□□□□□ -1.01
DDX60-201ENST00000393743 NFXL1Q6ZNB6 911 aa8.72□□□□□ -1.01
DDX60-201ENST00000393743 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
DDX60-201ENST00000393743 PES1O00541 588 aaKnown RBP8.72□□□□□ -1.01
DDX60-201ENST00000393743 PSMA5P28066 241 aa8.72□□□□□ -1.01
DDX60-201ENST00000393743 CREBRFQ8IUR6 639 aa8.72□□□□□ -1.01
DDX60-201ENST00000393743 CCDC7Q96M83 1385 aa8.72□□□□□ -1.01
DDX60-201ENST00000393743 UBTFL1P0CB47 393 aaPredicted RBP8.72□□□□□ -1.01
DDX60-201ENST00000393743 ANO2Q9NQ90 1003 aa8.72□□□□□ -1.01
DDX60-201ENST00000393743 RAD54L2Q9Y4B4 1467 aa8.71□□□□□ -1.01
DDX60-201ENST00000393743 NUCB2P80303 420 aa8.71□□□□□ -1.02
DDX60-201ENST00000393743 KRI1Q8N9T8 703 aaKnown RBP8.71□□□□□ -1.02
DDX60-201ENST00000393743 MCTP1Q6DN14 999 aa8.71□□□□□ -1.02
DDX60-201ENST00000393743 CT47B1P0C2W7 299 aaPredicted RBP8.71□□□□□ -1.02
DDX60-201ENST00000393743 BRD4O60885 1362 aaPredicted RBP8.7□□□□□ -1.02
DDX60-201ENST00000393743 AQRO60306 1485 aaKnown RBP eCLIP8.7□□□□□ -1.02
DDX60-201ENST00000393743 FBXW7Q969H0 707 aa8.7□□□□□ -1.02
DDX60-201ENST00000393743 SPG7Q9UQ90 795 aa8.7□□□□□ -1.02
DDX60-201ENST00000393743 NOL8Q76FK4 1167 aaKnown RBP8.7□□□□□ -1.02
DDX60-201ENST00000393743 CLASRPQ8N2M8 674 aaKnown RBP8.7□□□□□ -1.02
DDX60-201ENST00000393743 ABTB2Q8N961 1025 aa8.7□□□□□ -1.02
DDX60-201ENST00000393743 ANKRD30BQ9BXX2 1392 aa8.7□□□□□ -1.02
DDX60-201ENST00000393743 LRRC9Q6ZRR7 1453 aa8.7□□□□□ -1.02
DDX60-201ENST00000393743 NCOA2Q15596 1464 aa8.7□□□□□ -1.02
DDX60-201ENST00000393743 RAD21O60216 631 aa8.69□□□□□ -1.02
DDX60-201ENST00000393743 RDXP35241 583 aaKnown RBP8.69□□□□□ -1.02
DDX60-201ENST00000393743 PHF23Q9BUL5 403 aaPredicted RBP8.69□□□□□ -1.02
DDX60-201ENST00000393743 DDX49Q9Y6V7 483 aaKnown RBP8.69□□□□□ -1.02
DDX60-201ENST00000393743 ESCO1Q5FWF5 840 aa8.69□□□□□ -1.02
DDX60-201ENST00000393743 WWC2Q6AWC2 1192 aa8.69□□□□□ -1.02
DDX60-201ENST00000393743 CCDC73Q6ZRK6 1079 aa8.69□□□□□ -1.02
DDX60-201ENST00000393743 CNTROBQ8N137 903 aa8.69□□□□□ -1.02
DDX60-201ENST00000393743 CNKSR2Q8WXI2 1034 aa8.68□□□□□ -1.02
DDX60-201ENST00000393743 SMC3Q9UQE7 1217 aa8.68□□□□□ -1.02
DDX60-201ENST00000393743 COG6Q9Y2V7 657 aa8.68□□□□□ -1.02
DDX60-201ENST00000393743 MCM2P49736 904 aa8.68□□□□□ -1.02
DDX60-201ENST00000393743 ATAD2Q6PL18 1390 aa8.68□□□□□ -1.02
DDX60-201ENST00000393743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.68□□□□□ -1.02
DDX60-201ENST00000393743 DAPK1P53355 1430 aa8.68□□□□□ -1.02
DDX60-201ENST00000393743 MAP3K1Q13233 1512 aa8.68□□□□□ -1.02
DDX60-201ENST00000393743 CDR1P51861 262 aa8.68□□□□□ -1.02
DDX60-201ENST00000393743 GZF1Q9H116 711 aaPredicted RBP8.68□□□□□ -1.02
DDX60-201ENST00000393743 PRDM2Q13029 1718 aa8.68□□□□□ -1.02
DDX60-201ENST00000393743 EHBP1L1Q8N3D4 1523 aa8.68□□□□□ -1.02
DDX60-201ENST00000393743 PIP4K2AP48426 406 aaPredicted RBP8.67□□□□□ -1.02
DDX60-201ENST00000393743 PCMTD1Q96MG8 357 aaPredicted RBP8.67□□□□□ -1.02
DDX60-201ENST00000393743 TROQ12816 1431 aaPredicted RBP8.67□□□□□ -1.02
DDX60-201ENST00000393743 DNMBPQ6XZF7 1577 aa8.67□□□□□ -1.02
DDX60-201ENST00000393743 DHX8Q14562 1220 aaKnown RBP8.67□□□□□ -1.02
DDX60-201ENST00000393743 WASHC4Q2M389 1173 aa8.67□□□□□ -1.02
DDX60-201ENST00000393743 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.02
DDX60-201ENST00000393743 ZNF428Q96B54 188 aa8.67□□□□□ -1.02
DDX60-201ENST00000393743 NEUROD6Q96NK8 337 aa8.67□□□□□ -1.02
DDX60-201ENST00000393743 PDCP20941 246 aa8.67□□□□□ -1.02
DDX60-201ENST00000393743 ZSCAN25Q6NSZ9 544 aa8.67□□□□□ -1.02
DDX60-201ENST00000393743 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.67□□□□□ -1.02
DDX60-201ENST00000393743 CDC45O75419 566 aa8.67□□□□□ -1.02
DDX60-201ENST00000393743 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
DDX60-201ENST00000393743 CHMP5Q9NZZ3 219 aa8.67□□□□□ -1.02
DDX60-201ENST00000393743 DEKP35659 375 aaKnown RBP8.66□□□□□ -1.02
DDX60-201ENST00000393743 BICD2Q8TD16 824 aa8.66□□□□□ -1.02
DDX60-201ENST00000393743 NAT10Q9H0A0 1025 aaKnown RBP8.66□□□□□ -1.02
DDX60-201ENST00000393743 KIF7Q2M1P5 1343 aa8.66□□□□□ -1.02
DDX60-201ENST00000393743 CCAR1Q8IX12 1150 aaKnown RBP8.66□□□□□ -1.02
DDX60-201ENST00000393743 KCNH5Q8NCM2 988 aa8.66□□□□□ -1.02
DDX60-201ENST00000393743 GGNBP2Q9H3C7 697 aa8.66□□□□□ -1.02
DDX60-201ENST00000393743 PDIA4P13667 645 aaKnown RBP8.66□□□□□ -1.02
DDX60-201ENST00000393743 CCDC27Q2M243 656 aa8.66□□□□□ -1.02
DDX60-201ENST00000393743 CCDC158Q5M9N0 1113 aa8.66□□□□□ -1.02
DDX60-201ENST00000393743 PPP6R1Q9UPN7 881 aa8.66□□□□□ -1.02
DDX60-201ENST00000393743 PDE4AP27815 886 aa8.65□□□□□ -1.02
DDX60-201ENST00000393743 CCT4P50991 539 aaKnown RBP8.65□□□□□ -1.02
DDX60-201ENST00000393743 AFAP1Q8N556 730 aa8.65□□□□□ -1.02
DDX60-201ENST00000393743 NACAP1Q9BZK3 213 aa8.65□□□□□ -1.02
DDX60-201ENST00000393743 CRBNQ96SW2 442 aa8.65□□□□□ -1.02
DDX60-201ENST00000393743 C9orf84Q5VXU9 1444 aa8.65□□□□□ -1.02
DDX60-201ENST00000393743 CABP2Q9NPB3 220 aa8.65□□□□□ -1.02
DDX60-201ENST00000393743 TXLNAP40222 546 aa8.65□□□□□ -1.03
DDX60-201ENST00000393743 SASS6Q6UVJ0 657 aa8.65□□□□□ -1.03
DDX60-201ENST00000393743 KLHL34Q8N239 644 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 LAMC3Q9Y6N6 1575 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 GCC1Q96CN9 775 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 CABP4P57796 275 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 CCDC173Q0VFZ6 552 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 ODF2Q5BJF6 829 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 DMRT2Q9Y5R5 561 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 BIVM-ERCC5R4GMW8 1640 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 ABCA10Q8WWZ4 1543 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 OLFM4Q6UX06 510 aa8.64□□□□□ -1.03
DDX60-201ENST00000393743 RTEL1-TNFRSF6BF6WH68 1400 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms