RNA–Protein interactions for RNA: ENST00000391858.8

SPRTN-204, Transcript of SprT-like N-terminal domain, humanhuman

TSL 1 (best) BASIC

Gene SPRTN, Length 3,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRTN-204ENST00000391858 TCP11L2Q8N4U5 519 aa14.28□□□□□ -0.12
SPRTN-204ENST00000391858 CHMP4BQ9H444 224 aaKnown RBP14.28□□□□□ -0.12
SPRTN-204ENST00000391858 TSR2Q969E8 191 aaKnown RBP14.28□□□□□ -0.12
SPRTN-204ENST00000391858 DMTNQ08495 405 aa14.27□□□□□ -0.12
SPRTN-204ENST00000391858 PPP4R3BQ5MIZ7 849 aa14.27□□□□□ -0.13
SPRTN-204ENST00000391858 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.27□□□□□ -0.13
SPRTN-204ENST00000391858 PRG4Q92954 1404 aaPredicted RBP14.26□□□□□ -0.13
SPRTN-204ENST00000391858 NESP48681 1621 aa14.26□□□□□ -0.13
SPRTN-204ENST00000391858 TERF1P54274 439 aa14.26□□□□□ -0.13
SPRTN-204ENST00000391858 ABCA10Q8WWZ4 1543 aa14.26□□□□□ -0.13
SPRTN-204ENST00000391858 ANKRD45Q5TZF3 282 aa14.26□□□□□ -0.13
SPRTN-204ENST00000391858 C17orf53Q8N3J3 647 aaPredicted RBP14.26□□□□□ -0.13
SPRTN-204ENST00000391858 PKP1Q13835 747 aa14.26□□□□□ -0.13
SPRTN-204ENST00000391858 COL17A1Q9UMD9 1497 aaPredicted RBP14.25□□□□□ -0.13
SPRTN-204ENST00000391858 ZNF500O60304 480 aaPredicted RBP14.25□□□□□ -0.13
SPRTN-204ENST00000391858 ZSCAN20P17040 1043 aaPredicted RBP14.25□□□□□ -0.13
SPRTN-204ENST00000391858 INSRP06213 1382 aa14.25□□□□□ -0.13
SPRTN-204ENST00000391858 PRAG1Q86YV5 1406 aa14.24□□□□□ -0.13
SPRTN-204ENST00000391858 CCDC39Q9UFE4 941 aa14.24□□□□□ -0.13
SPRTN-204ENST00000391858 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
SPRTN-204ENST00000391858 PLCD3Q8N3E9 789 aa14.24□□□□□ -0.13
SPRTN-204ENST00000391858 SNX21Q969T3 373 aa14.24□□□□□ -0.13
SPRTN-204ENST00000391858 MAGI2Q86UL8 1455 aa14.24□□□□□ -0.13
SPRTN-204ENST00000391858 DNMT1P26358 1616 aaKnown RBP14.23□□□□□ -0.13
SPRTN-204ENST00000391858 DDIT3P35638 169 aa14.23□□□□□ -0.13
SPRTN-204ENST00000391858 KIAA2012Q0VF49 1180 aa14.23□□□□□ -0.13
SPRTN-204ENST00000391858 CGNQ9P2M7 1197 aaKnown RBP14.23□□□□□ -0.13
SPRTN-204ENST00000391858 C1orf115Q9H7X2 142 aa14.23□□□□□ -0.13
SPRTN-204ENST00000391858 SAMD9Q5K651 1589 aa14.22□□□□□ -0.13
SPRTN-204ENST00000391858 ZNF771Q7L3S4 317 aaPredicted RBP14.22□□□□□ -0.13
SPRTN-204ENST00000391858 RTEL1-TNFRSF6BF6WH68 1400 aa14.22□□□□□ -0.13
SPRTN-204ENST00000391858 NINLQ9Y2I6 1382 aa14.22□□□□□ -0.13
SPRTN-204ENST00000391858 CDK11BP21127 795 aaKnown RBP14.22□□□□□ -0.13
SPRTN-204ENST00000391858 ZBTB22O15209 634 aa14.22□□□□□ -0.13
SPRTN-204ENST00000391858 CDCA8Q53HL2 280 aa14.22□□□□□ -0.13
SPRTN-204ENST00000391858 RBM25P49756 843 aaKnown RBP14.21□□□□□ -0.13
SPRTN-204ENST00000391858 E9PCH4 1651 aa14.21□□□□□ -0.13
SPRTN-204ENST00000391858 MORC1Q86VD1 984 aa14.21□□□□□ -0.13
SPRTN-204ENST00000391858 NAP1L2Q9ULW6 460 aaPredicted RBP14.21□□□□□ -0.13
SPRTN-204ENST00000391858 GTF2E1P29083 439 aaPredicted RBP14.21□□□□□ -0.14
SPRTN-204ENST00000391858 ATP2B3Q16720 1220 aa14.21□□□□□ -0.14
SPRTN-204ENST00000391858 NOL8Q76FK4 1167 aaKnown RBP14.21□□□□□ -0.14
SPRTN-204ENST00000391858 GAPVD1Q14C86 1478 aa14.2□□□□□ -0.14
SPRTN-204ENST00000391858 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
SPRTN-204ENST00000391858 U2AF1L5P0DN76 240 aaPredicted RBP14.2□□□□□ -0.14
SPRTN-204ENST00000391858 TRIM27P14373 513 aa14.2□□□□□ -0.14
SPRTN-204ENST00000391858 FBLN2P98095 1184 aa14.2□□□□□ -0.14
SPRTN-204ENST00000391858 U2AF1Q01081 240 aaKnown RBP eCLIP14.2□□□□□ -0.14
SPRTN-204ENST00000391858 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.2□□□□□ -0.14
SPRTN-204ENST00000391858 CUL7Q14999 1698 aa14.2□□□□□ -0.14
SPRTN-204ENST00000391858 ZNF445P59923 1031 aa14.19□□□□□ -0.14
SPRTN-204ENST00000391858 EXOSC9Q06265 439 aaKnown RBP14.19□□□□□ -0.14
SPRTN-204ENST00000391858 HS1BP3Q53T59 392 aa14.19□□□□□ -0.14
SPRTN-204ENST00000391858 TMEM57Q8N5G2 664 aa14.19□□□□□ -0.14
SPRTN-204ENST00000391858 LMBRD1Q9NUN5 540 aa14.19□□□□□ -0.14
SPRTN-204ENST00000391858 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
SPRTN-204ENST00000391858 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
SPRTN-204ENST00000391858 ARHGEF12Q9NZN5 1544 aa14.19□□□□□ -0.14
SPRTN-204ENST00000391858 NOB1Q9ULX3 412 aaKnown RBP14.19□□□□□ -0.14
SPRTN-204ENST00000391858 VIRMAQ69YN4 1812 aaKnown RBP14.18□□□□□ -0.14
SPRTN-204ENST00000391858 KIF16BQ96L93 1317 aa14.18□□□□□ -0.14
SPRTN-204ENST00000391858 APBB1O00213 710 aa14.18□□□□□ -0.14
SPRTN-204ENST00000391858 TBC1D9Q6ZT07 1266 aa14.18□□□□□ -0.14
SPRTN-204ENST00000391858 RUNDC1Q96C34 613 aa14.18□□□□□ -0.14
SPRTN-204ENST00000391858 DDX19BQ9UMR2 479 aa14.18□□□□□ -0.14
SPRTN-204ENST00000391858 TTC12Q9H892 705 aaPredicted RBP14.18□□□□□ -0.14
SPRTN-204ENST00000391858 CHD1LQ86WJ1 897 aa14.18□□□□□ -0.14
SPRTN-204ENST00000391858 NSFL1CQ9UNZ2 370 aaKnown RBP14.18□□□□□ -0.14
SPRTN-204ENST00000391858 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
SPRTN-204ENST00000391858 CC2D2AQ9P2K1 1620 aa14.17□□□□□ -0.14
SPRTN-204ENST00000391858 UTP14CQ5TAP6 766 aaKnown RBP14.17□□□□□ -0.14
SPRTN-204ENST00000391858 ZGPATQ8N5A5 531 aaKnown RBP14.17□□□□□ -0.14
SPRTN-204ENST00000391858 GPT2Q8TD30 523 aa14.17□□□□□ -0.14
SPRTN-204ENST00000391858 KIF2CQ99661 725 aa14.17□□□□□ -0.14
SPRTN-204ENST00000391858 TMEM63CQ9P1W3 806 aa14.17□□□□□ -0.14
SPRTN-204ENST00000391858 U2SURPO15042 1029 aaKnown RBP14.17□□□□□ -0.14
SPRTN-204ENST00000391858 NUCB2P80303 420 aa14.17□□□□□ -0.14
SPRTN-204ENST00000391858 U2AF2P26368 475 aaKnown RBP eCLIP14.16□□□□□ -0.14
SPRTN-204ENST00000391858 SSH1Q8WYL5 1049 aa14.16□□□□□ -0.14
SPRTN-204ENST00000391858 KIF3AQ9Y496 699 aa14.16□□□□□ -0.14
SPRTN-204ENST00000391858 PDCL2Q8N4E4 241 aa14.16□□□□□ -0.14
SPRTN-204ENST00000391858 MYRIPQ8NFW9 859 aa14.16□□□□□ -0.14
SPRTN-204ENST00000391858 PDLIM2Q96JY6 352 aa14.16□□□□□ -0.14
SPRTN-204ENST00000391858 ZNF710Q8N1W2 664 aa14.16□□□□□ -0.14
SPRTN-204ENST00000391858 AK9Q5TCS8 1911 aa14.15□□□□□ -0.14
SPRTN-204ENST00000391858 C9orf84Q5VXU9 1444 aa14.15□□□□□ -0.14
SPRTN-204ENST00000391858 LRSAM1Q6UWE0 723 aa14.14□□□□□ -0.15
SPRTN-204ENST00000391858 NCOA3Q9Y6Q9 1424 aa14.14□□□□□ -0.15
SPRTN-204ENST00000391858 PLEKHD1A6NEE1 506 aa14.14□□□□□ -0.15
SPRTN-204ENST00000391858 ATF7IPQ6VMQ6 1270 aa14.14□□□□□ -0.15
SPRTN-204ENST00000391858 GDPD2Q9HCC8 539 aa14.14□□□□□ -0.15
SPRTN-204ENST00000391858 USP25Q9UHP3 1055 aa14.14□□□□□ -0.15
SPRTN-204ENST00000391858 GTPBP4Q9BZE4 634 aaKnown RBP14.13□□□□□ -0.15
SPRTN-204ENST00000391858 HDAC1Q13547 482 aaPredicted RBP14.13□□□□□ -0.15
SPRTN-204ENST00000391858 NOLC1Q14978 699 aaKnown RBP eCLIP14.13□□□□□ -0.15
SPRTN-204ENST00000391858 MCM5P33992 734 aa14.13□□□□□ -0.15
SPRTN-204ENST00000391858 AEBP2Q6ZN18 517 aaPredicted RBP14.13□□□□□ -0.15
SPRTN-204ENST00000391858 CARD14Q9BXL6 1004 aa14.13□□□□□ -0.15
SPRTN-204ENST00000391858 MTHFSP49914 203 aa14.12□□□□□ -0.15
SPRTN-204ENST00000391858 NUCB1Q02818 461 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms