RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 U2AF2P26368 475 aaKnown RBP eCLIP9.4□□□□□ -0.93e-8■■■■□ 25.1
UFL1-201ENST00000369278 CDCA8Q53HL2 280 aa9.4□□□□□ -0.9
UFL1-201ENST00000369278 NECTIN2Q92692 538 aa9.4□□□□□ -0.9
UFL1-201ENST00000369278 ABCA5Q8WWZ7 1642 aa9.4□□□□□ -0.91
UFL1-201ENST00000369278 FSD2A1L4K1 749 aa9.4□□□□□ -0.91
UFL1-201ENST00000369278 PHF14O94880 888 aa9.4□□□□□ -0.91
UFL1-201ENST00000369278 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.91
UFL1-201ENST00000369278 KDM6BO15054 1643 aa9.4□□□□□ -0.91
UFL1-201ENST00000369278 NUCB2P80303 420 aa9.39□□□□□ -0.91
UFL1-201ENST00000369278 HMGN5P82970 282 aaKnown RBP9.39□□□□□ -0.91
UFL1-201ENST00000369278 STAG3Q9UJ98 1225 aa9.39□□□□□ -0.91
UFL1-201ENST00000369278 NAIPQ13075 1403 aa9.39□□□□□ -0.91
UFL1-201ENST00000369278 K7ELQ4 463 aaPredicted RBP9.39□□□□□ -0.91
UFL1-201ENST00000369278 DDX54Q8TDD1 881 aaKnown RBP9.39□□□□□ -0.91
UFL1-201ENST00000369278 GOLGA6L19H0YKK7 550 aa9.39□□□□□ -0.91
UFL1-201ENST00000369278 SRPK2P78362 688 aaKnown RBP9.39□□□□□ -0.91
UFL1-201ENST00000369278 CEBPZQ03701 1054 aaKnown RBP9.39□□□□□ -0.91
UFL1-201ENST00000369278 FILIP1Q7Z7B0 1213 aa9.39□□□□□ -0.91
UFL1-201ENST00000369278 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
UFL1-201ENST00000369278 MYOM3Q5VTT5 1437 aa9.39□□□□□ -0.91
UFL1-201ENST00000369278 OFD1O75665 1012 aa9.39□□□□□ -0.91
UFL1-201ENST00000369278 TTLL5Q6EMB2 1281 aa9.39□□□□□ -0.91
UFL1-201ENST00000369278 POLR1AO95602 1720 aaPredicted RBP9.38□□□□□ -0.91
UFL1-201ENST00000369278 PCF11O94913 1555 aaKnown RBP9.38□□□□□ -0.91
UFL1-201ENST00000369278 TRMT1Q9NXH9 659 aaKnown RBP9.38□□□□□ -0.91
UFL1-201ENST00000369278 SRRTQ9BXP5 876 aaKnown RBP9.38□□□□□ -0.91
UFL1-201ENST00000369278 HFM1A2PYH4 1435 aa9.38□□□□□ -0.91
UFL1-201ENST00000369278 CAMK4Q16566 473 aa9.38□□□□□ -0.91
UFL1-201ENST00000369278 BICD2Q8TD16 824 aa9.38□□□□□ -0.91
UFL1-201ENST00000369278 ANTXR1Q9H6X2 564 aa9.38□□□□□ -0.91
UFL1-201ENST00000369278 CCDC112Q8NEF3 446 aa9.37□□□□□ -0.91
UFL1-201ENST00000369278 UPF3BQ9BZI7 483 aaKnown RBP9.37□□□□□ -0.91
UFL1-201ENST00000369278 KIF16BQ96L93 1317 aa9.37□□□□□ -0.91
UFL1-201ENST00000369278 TCP11L2Q8N4U5 519 aa9.37□□□□□ -0.91
UFL1-201ENST00000369278 TBC1D32Q96NH3 1257 aa9.37□□□□□ -0.91
UFL1-201ENST00000369278 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
UFL1-201ENST00000369278 KDM4AO75164 1064 aa9.37□□□□□ -0.91
UFL1-201ENST00000369278 C14orf37Q86TY3 774 aa9.37□□□□□ -0.91
UFL1-201ENST00000369278 PCDHB15Q9Y5E8 787 aa9.37□□□□□ -0.91
UFL1-201ENST00000369278 LRPPRCP42704 1394 aaKnown RBP9.37□□□□□ -0.91
UFL1-201ENST00000369278 CFAP43Q8NDM7 1665 aa9.37□□□□□ -0.91
UFL1-201ENST00000369278 BAG4O95429 457 aaKnown RBP9.36□□□□□ -0.91
UFL1-201ENST00000369278 RIPK4P57078 832 aa9.36□□□□□ -0.91
UFL1-201ENST00000369278 EXOSC9Q06265 439 aaKnown RBP9.36□□□□□ -0.91
UFL1-201ENST00000369278 DYNC1I1O14576 645 aa9.36□□□□□ -0.91
UFL1-201ENST00000369278 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
UFL1-201ENST00000369278 TRAK1Q9UPV9 953 aa9.36□□□□□ -0.91
UFL1-201ENST00000369278 BRD4O60885 1362 aaPredicted RBP9.36□□□□□ -0.91
UFL1-201ENST00000369278 HCLS1P14317 486 aaPredicted RBP9.36□□□□□ -0.91
UFL1-201ENST00000369278 ZSCAN23Q3MJ62 389 aa9.36□□□□□ -0.91
UFL1-201ENST00000369278 TEX35Q5T0J7 233 aa9.35□□□□□ -0.91
UFL1-201ENST00000369278 FERMT3Q86UX7 667 aa9.35□□□□□ -0.91
UFL1-201ENST00000369278 STK11IPQ8N1F8 1099 aa9.35□□□□□ -0.91
UFL1-201ENST00000369278 MNS1Q8NEH6 495 aa9.35□□□□□ -0.91
UFL1-201ENST00000369278 HNRNPMP52272 730 aaKnown RBP eCLIP9.35□□□□□ -0.91
UFL1-201ENST00000369278 TAF7LQ5H9L4 462 aa9.35□□□□□ -0.91
UFL1-201ENST00000369278 CCDC94Q9BW85 323 aaPredicted RBP9.35□□□□□ -0.91
UFL1-201ENST00000369278 RBSNQ9H1K0 784 aa9.35□□□□□ -0.91
UFL1-201ENST00000369278 DDX19BQ9UMR2 479 aa9.34□□□□□ -0.91
UFL1-201ENST00000369278 GOLGA6L1Q8N7Z2 621 aa9.34□□□□□ -0.91
UFL1-201ENST00000369278 HSP90AB3PQ58FF7 597 aa9.34□□□□□ -0.91
UFL1-201ENST00000369278 DUSP27Q5VZP5 1158 aa9.34□□□□□ -0.91
UFL1-201ENST00000369278 FGD6Q6ZV73 1430 aa9.33□□□□□ -0.92
UFL1-201ENST00000369278 PLEKHD1A6NEE1 506 aa9.33□□□□□ -0.92
UFL1-201ENST00000369278 MAP4K4O95819 1239 aaPredicted RBP9.33□□□□□ -0.92
UFL1-201ENST00000369278 NLRP1Q9C000 1473 aa9.33□□□□□ -0.92
UFL1-201ENST00000369278 BIVM-ERCC5R4GMW8 1640 aa9.33□□□□□ -0.92
UFL1-201ENST00000369278 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
UFL1-201ENST00000369278 NOB1Q9ULX3 412 aaKnown RBP9.33□□□□□ -0.92
UFL1-201ENST00000369278 ZKSCAN5Q9Y2L8 839 aa9.33□□□□□ -0.92
UFL1-201ENST00000369278 ADCY5O95622 1261 aa9.33□□□□□ -0.92
UFL1-201ENST00000369278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.33□□□□□ -0.92
UFL1-201ENST00000369278 GTF2E1P29083 439 aaPredicted RBP9.32□□□□□ -0.92
UFL1-201ENST00000369278 NOLC1Q14978 699 aaKnown RBP eCLIP9.32□□□□□ -0.92
UFL1-201ENST00000369278 CKAP2LQ8IYA6 745 aa9.32□□□□□ -0.92
UFL1-201ENST00000369278 SMAP1Q8IYB5 467 aaPredicted RBP9.32□□□□□ -0.92
UFL1-201ENST00000369278 NOC3LQ8WTT2 800 aaKnown RBP9.32□□□□□ -0.92
UFL1-201ENST00000369278 PPFIA3O75145 1194 aa9.32□□□□□ -0.92
UFL1-201ENST00000369278 SYTL4Q96C24 671 aaPredicted RBP9.32□□□□□ -0.92
UFL1-201ENST00000369278 SPINK5Q9NQ38 1064 aaPredicted RBP9.32□□□□□ -0.92
UFL1-201ENST00000369278 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.32□□□□□ -0.92
UFL1-201ENST00000369278 HMOX1P09601 288 aa9.32□□□□□ -0.92
UFL1-201ENST00000369278 IRX3P78415 501 aaPredicted RBP9.32□□□□□ -0.92
UFL1-201ENST00000369278 CDC45O75419 566 aa9.31□□□□□ -0.92
UFL1-201ENST00000369278 C10orf67Q8IYJ2 551 aa9.31□□□□□ -0.92
UFL1-201ENST00000369278 SMC3Q9UQE7 1217 aa9.31□□□□□ -0.92
UFL1-201ENST00000369278 VIRMAQ69YN4 1812 aaKnown RBP9.31□□□□□ -0.92
UFL1-201ENST00000369278 SMARCA5O60264 1052 aaPredicted RBP9.31□□□□□ -0.92
UFL1-201ENST00000369278 SLFN5Q08AF3 891 aa9.31□□□□□ -0.92
UFL1-201ENST00000369278 GPS2Q13227 327 aa9.31□□□□□ -0.92
UFL1-201ENST00000369278 TSHZ3Q63HK5 1081 aa9.31□□□□□ -0.92
UFL1-201ENST00000369278 NUTM2FA1L443 756 aa9.31□□□□□ -0.92
UFL1-201ENST00000369278 ZGPATQ8N5A5 531 aaKnown RBP9.31□□□□□ -0.92
UFL1-201ENST00000369278 ISY1Q9ULR0 285 aaKnown RBP9.31□□□□□ -0.92
UFL1-201ENST00000369278 PES1O00541 588 aaKnown RBP9.3□□□□□ -0.92
UFL1-201ENST00000369278 RLBP1P12271 317 aa9.3□□□□□ -0.92
UFL1-201ENST00000369278 SF3A1Q15459 793 aaKnown RBP9.3□□□□□ -0.92
UFL1-201ENST00000369278 TEX14Q8IWB6 1497 aa9.3□□□□□ -0.92
UFL1-201ENST00000369278 GIMAP6Q6P9H5 292 aa9.3□□□□□ -0.92
UFL1-201ENST00000369278 GTF3C6Q969F1 213 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms