RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ZBTB7CA1YPR0 619 aa19.17■□□□□ 0.66
LMNA-201ENST00000347559 ITPRIPQ8IWB1 547 aa19.17■□□□□ 0.66
LMNA-201ENST00000347559 DZIP1LQ8IYY4 767 aaKnown RBP19.17■□□□□ 0.66
LMNA-201ENST00000347559 NGEFQ8N5V2 710 aa19.16■□□□□ 0.66
LMNA-201ENST00000347559 CIZ1Q9ULV3 898 aaPredicted RBP19.16■□□□□ 0.66
LMNA-201ENST00000347559 CD2BP2O95400 341 aaKnown RBP19.16■□□□□ 0.66
LMNA-201ENST00000347559 ZKSCAN2Q63HK3 967 aa19.15■□□□□ 0.66
LMNA-201ENST00000347559 RBM42Q9BTD8 480 aaKnown RBP19.15■□□□□ 0.66
LMNA-201ENST00000347559 LNPKQ9C0E8 428 aa19.15■□□□□ 0.66
LMNA-201ENST00000347559 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.65
LMNA-201ENST00000347559 SNX21Q969T3 373 aa19.14■□□□□ 0.65
LMNA-201ENST00000347559 ZHX1Q9UKY1 873 aaPredicted RBP19.14■□□□□ 0.65
LMNA-201ENST00000347559 MAP7D2Q96T17 732 aa19.13■□□□□ 0.65
LMNA-201ENST00000347559 SHANK2Q9UPX8 1470 aa19.13■□□□□ 0.65
LMNA-201ENST00000347559 PTMSP20962 102 aa19.13■□□□□ 0.65
LMNA-201ENST00000347559 CAVIN1Q6NZI2 390 aaKnown RBP19.13■□□□□ 0.65
LMNA-201ENST00000347559 NCOA3Q9Y6Q9 1424 aa19.13■□□□□ 0.65
LMNA-201ENST00000347559 RBM25P49756 843 aaKnown RBP19.12■□□□□ 0.65
LMNA-201ENST00000347559 RUNDC1Q96C34 613 aa19.12■□□□□ 0.65
LMNA-201ENST00000347559 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
LMNA-201ENST00000347559 ADAMTS12P58397 1594 aa19.12■□□□□ 0.65
LMNA-201ENST00000347559 ABCC10Q5T3U5 1492 aa19.12■□□□□ 0.65
LMNA-201ENST00000347559 CARD14Q9BXL6 1004 aa19.11■□□□□ 0.65
LMNA-201ENST00000347559 CDC42BPAQ5VT25 1732 aa19.11■□□□□ 0.65
LMNA-201ENST00000347559 MCTP1Q6DN14 999 aa19.11■□□□□ 0.65
LMNA-201ENST00000347559 CCDC141Q6ZP82 1450 aa19.1■□□□□ 0.65
LMNA-201ENST00000347559 TSR2Q969E8 191 aaKnown RBP19.1■□□□□ 0.65
LMNA-201ENST00000347559 GAS2L2Q8NHY3 880 aa19.1■□□□□ 0.65
LMNA-201ENST00000347559 PBRM1Q86U86 1689 aa19.1■□□□□ 0.65
LMNA-201ENST00000347559 K7ELQ4 463 aaPredicted RBP19.09■□□□□ 0.65
LMNA-201ENST00000347559 BAG4O95429 457 aaKnown RBP19.09■□□□□ 0.65
LMNA-201ENST00000347559 KLHL40Q2TBA0 621 aa19.09■□□□□ 0.65
LMNA-201ENST00000347559 LAMC1P11047 1609 aa19.09■□□□□ 0.65
LMNA-201ENST00000347559 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
LMNA-201ENST00000347559 EIF2AK4Q9P2K8 1649 aaKnown RBP19.08■□□□□ 0.65
LMNA-201ENST00000347559 FBLN2P98095 1184 aa19.08■□□□□ 0.65
LMNA-201ENST00000347559 MORC1Q86VD1 984 aa19.08■□□□□ 0.65
LMNA-201ENST00000347559 TERF1P54274 439 aa19.08■□□□□ 0.64
LMNA-201ENST00000347559 NUP160Q12769 1436 aa19.07■□□□□ 0.64
LMNA-201ENST00000347559 RBSNQ9H1K0 784 aa19.07■□□□□ 0.64
LMNA-201ENST00000347559 TRIM27P14373 513 aa19.07■□□□□ 0.64
LMNA-201ENST00000347559 NOL7Q9UMY1 257 aaKnown RBP19.07■□□□□ 0.64
LMNA-201ENST00000347559 WDR63Q8IWG1 891 aa19.06■□□□□ 0.64
LMNA-201ENST00000347559 PLXNC1O60486 1568 aa19.06■□□□□ 0.64
LMNA-201ENST00000347559 NPC1L1Q9UHC9 1359 aa19.06■□□□□ 0.64
LMNA-201ENST00000347559 HDAC1Q13547 482 aaPredicted RBP19.06■□□□□ 0.64
LMNA-201ENST00000347559 KIF2CQ99661 725 aa19.05■□□□□ 0.64
LMNA-201ENST00000347559 ZSCAN23Q3MJ62 389 aa19.05■□□□□ 0.64
LMNA-201ENST00000347559 DDX19BQ9UMR2 479 aa19.05■□□□□ 0.64
LMNA-201ENST00000347559 SYNMO15061 1565 aa19.05■□□□□ 0.64
LMNA-201ENST00000347559 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.05■□□□□ 0.64
LMNA-201ENST00000347559 MYO5CQ9NQX4 1742 aa19.04■□□□□ 0.64
LMNA-201ENST00000347559 PRIM1P49642 420 aaKnown RBP19.03■□□□□ 0.64
LMNA-201ENST00000347559 SMAP1Q8IYB5 467 aaPredicted RBP19.03■□□□□ 0.64
LMNA-201ENST00000347559 ZNF500O60304 480 aaPredicted RBP19.03■□□□□ 0.64
LMNA-201ENST00000347559 EXOSC9Q06265 439 aaKnown RBP19.03■□□□□ 0.64
LMNA-201ENST00000347559 RBM27Q9P2N5 1060 aaKnown RBP19.03■□□□□ 0.64
LMNA-201ENST00000347559 TMEM57Q8N5G2 664 aa19.03■□□□□ 0.64
LMNA-201ENST00000347559 ANKRD45Q5TZF3 282 aa19.02■□□□□ 0.63
LMNA-201ENST00000347559 MAGI1Q96QZ7 1491 aaPredicted RBP19.01■□□□□ 0.63
LMNA-201ENST00000347559 DYNC1I1O14576 645 aa19.01■□□□□ 0.63
LMNA-201ENST00000347559 U2AF1L5P0DN76 240 aaPredicted RBP19.01■□□□□ 0.63
LMNA-201ENST00000347559 U2AF1Q01081 240 aaKnown RBP eCLIP19.01■□□□□ 0.63
LMNA-201ENST00000347559 SSH1Q8WYL5 1049 aa19.01■□□□□ 0.63
LMNA-201ENST00000347559 NOB1Q9ULX3 412 aaKnown RBP19.01■□□□□ 0.63
LMNA-201ENST00000347559 ZKSCAN5Q9Y2L8 839 aa19.01■□□□□ 0.63
LMNA-201ENST00000347559 SYNJ2O15056 1496 aa19.01■□□□□ 0.63
LMNA-201ENST00000347559 SCAF11Q99590 1463 aaKnown RBP19.01■□□□□ 0.63
LMNA-201ENST00000347559 DNTTIP2Q5QJE6 756 aaKnown RBP19■□□□□ 0.63
LMNA-201ENST00000347559 CHD1LQ86WJ1 897 aa19■□□□□ 0.63
LMNA-201ENST00000347559 POLR3AO14802 1390 aaPredicted RBP19■□□□□ 0.63
LMNA-201ENST00000347559 ZNF445P59923 1031 aa19■□□□□ 0.63
LMNA-201ENST00000347559 ATF7IPQ6VMQ6 1270 aa19■□□□□ 0.63
LMNA-201ENST00000347559 PRPF40AO75400 957 aaKnown RBP19■□□□□ 0.63
LMNA-201ENST00000347559 MTHFSP49914 203 aa19■□□□□ 0.63
LMNA-201ENST00000347559 RNF214Q8ND24 703 aa19■□□□□ 0.63
LMNA-201ENST00000347559 JARID2Q92833 1246 aaPredicted RBP19■□□□□ 0.63
LMNA-201ENST00000347559 NUCB1Q02818 461 aa18.99■□□□□ 0.63
LMNA-201ENST00000347559 CSPP1Q1MSJ5 1256 aa18.99■□□□□ 0.63
LMNA-201ENST00000347559 HS1BP3Q53T59 392 aa18.99■□□□□ 0.63
LMNA-201ENST00000347559 PTMAP06454 111 aaKnown RBP18.99■□□□□ 0.63
LMNA-201ENST00000347559 MPNDQ8N594 471 aa18.99■□□□□ 0.63
LMNA-201ENST00000347559 PKP1Q13835 747 aa18.98■□□□□ 0.63
LMNA-201ENST00000347559 TBC1D9Q6ZT07 1266 aa18.98■□□□□ 0.63
LMNA-201ENST00000347559 MTERF4Q7Z6M4 381 aaKnown RBP18.98■□□□□ 0.63
LMNA-201ENST00000347559 AK9Q5TCS8 1911 aa18.98■□□□□ 0.63
LMNA-201ENST00000347559 TSC1Q92574 1164 aa18.98■□□□□ 0.63
LMNA-201ENST00000347559 SASS6Q6UVJ0 657 aa18.98■□□□□ 0.63
LMNA-201ENST00000347559 FOXD4L5Q5VV16 416 aaPredicted RBP18.97■□□□□ 0.63
LMNA-201ENST00000347559 FOXD4L4Q8WXT5 416 aaPredicted RBP18.97■□□□□ 0.63
LMNA-201ENST00000347559 CHAMP1Q96JM3 812 aa18.97■□□□□ 0.63
LMNA-201ENST00000347559 PHF23Q9BUL5 403 aaPredicted RBP18.97■□□□□ 0.63
LMNA-201ENST00000347559 IBTKQ9P2D0 1353 aaPredicted RBP18.97■□□□□ 0.63
LMNA-201ENST00000347559 CFAP70Q5T0N1 1121 aa18.96■□□□□ 0.63
LMNA-201ENST00000347559 LMBRD1Q9NUN5 540 aa18.96■□□□□ 0.63
LMNA-201ENST00000347559 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
LMNA-201ENST00000347559 BMP2KLQ5H9B9 411 aa18.96■□□□□ 0.63
LMNA-201ENST00000347559 PDLIM2Q96JY6 352 aa18.96■□□□□ 0.63
LMNA-201ENST00000347559 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
LMNA-201ENST00000347559 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms