RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RALYLQ86SE5 291 aaKnown RBP18.26■□□□□ 0.51
UBE3B-202ENST00000342494 ANKRD20A12PQ8NF67 263 aa18.25■□□□□ 0.51
UBE3B-202ENST00000342494 UBTFL1P0CB47 393 aaPredicted RBP18.25■□□□□ 0.51
UBE3B-202ENST00000342494 ZBED9Q6R2W3 1325 aa18.25■□□□□ 0.51
UBE3B-202ENST00000342494 ANKRD50Q9ULJ7 1429 aa18.25■□□□□ 0.51
UBE3B-202ENST00000342494 THEMISQ8N1K5 641 aaPredicted RBP18.24■□□□□ 0.51
UBE3B-202ENST00000342494 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
UBE3B-202ENST00000342494 SAFBQ15424 915 aaKnown RBP eCLIP18.24■□□□□ 0.51
UBE3B-202ENST00000342494 HOOK1Q9UJC3 728 aaKnown RBP18.23■□□□□ 0.51
UBE3B-202ENST00000342494 ARHGAP5Q13017 1502 aa18.23■□□□□ 0.51
UBE3B-202ENST00000342494 IPO7O95373 1038 aaKnown RBP18.23■□□□□ 0.51
UBE3B-202ENST00000342494 GAS2L2Q8NHY3 880 aa18.23■□□□□ 0.51
UBE3B-202ENST00000342494 PDE4AP27815 886 aa18.23■□□□□ 0.51
UBE3B-202ENST00000342494 KIF6Q6ZMV9 814 aa18.23■□□□□ 0.51
UBE3B-202ENST00000342494 PPP1R1BQ9UD71 204 aaPredicted RBP18.23■□□□□ 0.51
UBE3B-202ENST00000342494 PRDM2Q13029 1718 aa18.22■□□□□ 0.51
UBE3B-202ENST00000342494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.22■□□□□ 0.51
UBE3B-202ENST00000342494 NUTM2BA6NNL0 878 aaPredicted RBP18.22■□□□□ 0.51
UBE3B-202ENST00000342494 NUTM2EB1AL46 878 aaPredicted RBP18.22■□□□□ 0.51
UBE3B-202ENST00000342494 NUTM2AQ8IVF1 878 aaPredicted RBP18.22■□□□□ 0.51
UBE3B-202ENST00000342494 BICD2Q8TD16 824 aa18.22■□□□□ 0.51
UBE3B-202ENST00000342494 FGD6Q6ZV73 1430 aa18.21■□□□□ 0.51
UBE3B-202ENST00000342494 INTS3Q68E01 1043 aaKnown RBP18.21■□□□□ 0.51
UBE3B-202ENST00000342494 CCAR2Q8N163 923 aaKnown RBP18.21■□□□□ 0.51
UBE3B-202ENST00000342494 IKQ13123 557 aaPredicted RBP18.21■□□□□ 0.51
UBE3B-202ENST00000342494 TATP17735 454 aaPredicted RBP18.2■□□□□ 0.5
UBE3B-202ENST00000342494 SKOR2Q2VWA4 1001 aaPredicted RBP18.2■□□□□ 0.5
UBE3B-202ENST00000342494 VPS37CA5D8V6 355 aaPredicted RBP18.2■□□□□ 0.5
UBE3B-202ENST00000342494 CUX1P39880 1505 aa18.2■□□□□ 0.5
UBE3B-202ENST00000342494 CFAP70Q5T0N1 1121 aa18.2■□□□□ 0.5
UBE3B-202ENST00000342494 MTMR7Q9Y216 660 aa18.19■□□□□ 0.5
UBE3B-202ENST00000342494 SMG6Q86US8 1419 aaKnown RBP18.19■□□□□ 0.5
UBE3B-202ENST00000342494 CCDC30Q5VVM6 783 aa18.19■□□□□ 0.5
UBE3B-202ENST00000342494 TBC1D2BQ9UPU7 963 aa18.19■□□□□ 0.5
UBE3B-202ENST00000342494 MTHFSP49914 203 aa18.18■□□□□ 0.5
UBE3B-202ENST00000342494 SMC3Q9UQE7 1217 aa18.18■□□□□ 0.5
UBE3B-202ENST00000342494 LNPKQ9C0E8 428 aa18.18■□□□□ 0.5
UBE3B-202ENST00000342494 PRAM1Q96QH2 718 aa18.18■□□□□ 0.5
UBE3B-202ENST00000342494 CCDC70Q6NSX1 233 aa18.18■□□□□ 0.5
UBE3B-202ENST00000342494 R3HCC1Q9Y3T6 440 aaKnown RBP18.18■□□□□ 0.5
UBE3B-202ENST00000342494 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
UBE3B-202ENST00000342494 FOSBP53539 338 aa18.17■□□□□ 0.5
UBE3B-202ENST00000342494 RRBP1Q9P2E9 1410 aaKnown RBP18.17■□□□□ 0.5
UBE3B-202ENST00000342494 FYCO1Q9BQS8 1478 aa18.17■□□□□ 0.5
UBE3B-202ENST00000342494 TOM1L2Q6ZVM7 507 aa18.17■□□□□ 0.5
UBE3B-202ENST00000342494 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
UBE3B-202ENST00000342494 BRMS1Q9HCU9 246 aa18.16■□□□□ 0.5
UBE3B-202ENST00000342494 SYNJ2O15056 1496 aa18.16■□□□□ 0.5
UBE3B-202ENST00000342494 CCAR1Q8IX12 1150 aaKnown RBP18.15■□□□□ 0.5
UBE3B-202ENST00000342494 CLASRPQ8N2M8 674 aaKnown RBP18.15■□□□□ 0.5
UBE3B-202ENST00000342494 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
UBE3B-202ENST00000342494 FSD1Q9BTV5 496 aa18.15■□□□□ 0.5
UBE3B-202ENST00000342494 GNAI3P08754 354 aa18.15■□□□□ 0.5
UBE3B-202ENST00000342494 XBP1P17861 261 aa18.14■□□□□ 0.49
UBE3B-202ENST00000342494 KIF7Q2M1P5 1343 aa18.14■□□□□ 0.49
UBE3B-202ENST00000342494 DDX54Q8TDD1 881 aaKnown RBP18.14■□□□□ 0.49
UBE3B-202ENST00000342494 ANKLE2Q86XL3 938 aa18.13■□□□□ 0.49
UBE3B-202ENST00000342494 PRKAR2BP31323 418 aa18.13■□□□□ 0.49
UBE3B-202ENST00000342494 SART3Q15020 963 aaKnown RBP18.13■□□□□ 0.49
UBE3B-202ENST00000342494 SURF6O75683 361 aaKnown RBP18.13■□□□□ 0.49
UBE3B-202ENST00000342494 NINLQ9Y2I6 1382 aa18.13■□□□□ 0.49
UBE3B-202ENST00000342494 CABP4P57796 275 aa18.12■□□□□ 0.49
UBE3B-202ENST00000342494 CCDC73Q6ZRK6 1079 aa18.12■□□□□ 0.49
UBE3B-202ENST00000342494 CNTROBQ8N137 903 aa18.12■□□□□ 0.49
UBE3B-202ENST00000342494 DNAJC2Q99543 621 aaKnown RBP18.12■□□□□ 0.49
UBE3B-202ENST00000342494 CNNM1Q9NRU3 951 aa18.12■□□□□ 0.49
UBE3B-202ENST00000342494 CCDC7Q96M83 1385 aa18.11■□□□□ 0.49
UBE3B-202ENST00000342494 PIP4K2BP78356 416 aa18.11■□□□□ 0.49
UBE3B-202ENST00000342494 TSHZ2Q9NRE2 1034 aa18.11■□□□□ 0.49
UBE3B-202ENST00000342494 SLC3A2P08195 630 aaKnown RBP18.1■□□□□ 0.49
UBE3B-202ENST00000342494 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
UBE3B-202ENST00000342494 PANK1Q8TE04 598 aa18.1■□□□□ 0.49
UBE3B-202ENST00000342494 GNL3LQ9NVN8 582 aaKnown RBP18.1■□□□□ 0.49
UBE3B-202ENST00000342494 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
UBE3B-202ENST00000342494 PSMA5P28066 241 aa18.09■□□□□ 0.49
UBE3B-202ENST00000342494 CT47A1Q5JQC4 288 aaPredicted RBP18.09■□□□□ 0.49
UBE3B-202ENST00000342494 ZNF692Q9BU19 519 aaPredicted RBP18.09■□□□□ 0.49
UBE3B-202ENST00000342494 TNNT3P45378 269 aaPredicted RBP18.09■□□□□ 0.49
UBE3B-202ENST00000342494 SPG7Q9UQ90 795 aa18.09■□□□□ 0.49
UBE3B-202ENST00000342494 NCOA2Q15596 1464 aa18.08■□□□□ 0.49
UBE3B-202ENST00000342494 SASS6Q6UVJ0 657 aa18.08■□□□□ 0.49
UBE3B-202ENST00000342494 CDK19Q9BWU1 502 aa18.08■□□□□ 0.49
UBE3B-202ENST00000342494 AAMPQ13685 434 aa18.08■□□□□ 0.48
UBE3B-202ENST00000342494 ZNF530Q6P9A1 599 aaPredicted RBP18.07■□□□□ 0.48
UBE3B-202ENST00000342494 SLC26A8Q96RN1 970 aa18.07■□□□□ 0.48
UBE3B-202ENST00000342494 SLC52A1Q9NWF4 448 aa18.07■□□□□ 0.48
UBE3B-202ENST00000342494 CDC45O75419 566 aa18.07■□□□□ 0.48
UBE3B-202ENST00000342494 ADAMTS8Q9UP79 889 aa18.07■□□□□ 0.48
UBE3B-202ENST00000342494 SCAPERQ9BY12 1400 aa18.07■□□□□ 0.48
UBE3B-202ENST00000342494 ZNF592Q92610 1267 aa18.07■□□□□ 0.48
UBE3B-202ENST00000342494 HDGFL1Q5TGJ6 251 aa18.07■□□□□ 0.48
UBE3B-202ENST00000342494 ODF2Q5BJF6 829 aa18.06■□□□□ 0.48
UBE3B-202ENST00000342494 KDM4AO75164 1064 aa18.06■□□□□ 0.48
UBE3B-202ENST00000342494 TWISTNBQ3B726 338 aaPredicted RBP18.06■□□□□ 0.48
UBE3B-202ENST00000342494 CCDC158Q5M9N0 1113 aa18.06■□□□□ 0.48
UBE3B-202ENST00000342494 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
UBE3B-202ENST00000342494 CABP1Q9NZU7 370 aa18.06■□□□□ 0.48
UBE3B-202ENST00000342494 CNTLNQ9NXG0 1405 aa18.06■□□□□ 0.48
UBE3B-202ENST00000342494 POGZQ7Z3K3 1410 aa18.06■□□□□ 0.48
UBE3B-202ENST00000342494 NUCB2P80303 420 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms