RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 GOLGA6AQ9NYA3 693 aa8.07□□□□□ -1.12
LIN7C-201ENST00000278193 WRNQ14191 1432 aaPredicted RBP eCLIP8.07□□□□□ -1.12
LIN7C-201ENST00000278193 S100BP04271 92 aaPredicted RBP8.06□□□□□ -1.12
LIN7C-201ENST00000278193 SSFA2P28290 1259 aa8.06□□□□□ -1.12
LIN7C-201ENST00000278193 DCAF8Q5TAQ9 597 aa8.06□□□□□ -1.12
LIN7C-201ENST00000278193 CCDC189A1A4V9 331 aa8.06□□□□□ -1.12
LIN7C-201ENST00000278193 U2SURPO15042 1029 aaKnown RBP8.06□□□□□ -1.12
LIN7C-201ENST00000278193 ABCC8Q09428 1581 aa8.06□□□□□ -1.12
LIN7C-201ENST00000278193 ONECUT3O60422 494 aaPredicted RBP8.06□□□□□ -1.12
LIN7C-201ENST00000278193 HSCBQ8IWL3 235 aa8.05□□□□□ -1.12
LIN7C-201ENST00000278193 IQSEC3Q9UPP2 1182 aaPredicted RBP8.05□□□□□ -1.12
LIN7C-201ENST00000278193 KIF27Q86VH2 1401 aa8.05□□□□□ -1.12
LIN7C-201ENST00000278193 PPP4R4Q6NUP7 873 aa8.05□□□□□ -1.12
LIN7C-201ENST00000278193 RNF25Q96BH1 459 aaPredicted RBP8.05□□□□□ -1.12
LIN7C-201ENST00000278193 STAG3Q9UJ98 1225 aa8.05□□□□□ -1.12
LIN7C-201ENST00000278193 IGSF5Q9NSI5 407 aa8.05□□□□□ -1.12
LIN7C-201ENST00000278193 GTF2E1P29083 439 aaPredicted RBP8.05□□□□□ -1.12
LIN7C-201ENST00000278193 ABL2P42684 1182 aa8.05□□□□□ -1.12
LIN7C-201ENST00000278193 OSCARQ8IYS5 282 aa8.05□□□□□ -1.12
LIN7C-201ENST00000278193 HSP90AB3PQ58FF7 597 aa8.04□□□□□ -1.12
LIN7C-201ENST00000278193 RPS6KC1Q96S38 1066 aa8.04□□□□□ -1.12
LIN7C-201ENST00000278193 STK11IPQ8N1F8 1099 aa8.04□□□□□ -1.12
LIN7C-201ENST00000278193 FAN1Q9Y2M0 1017 aa8.04□□□□□ -1.12
LIN7C-201ENST00000278193 MROH2BQ7Z745 1585 aa8.04□□□□□ -1.12
LIN7C-201ENST00000278193 VGFO15240 615 aaPredicted RBP8.04□□□□□ -1.12
LIN7C-201ENST00000278193 USP5P45974 858 aa8.04□□□□□ -1.12
LIN7C-201ENST00000278193 SMARCA4P51532 1647 aa8.04□□□□□ -1.12
LIN7C-201ENST00000278193 RPAINQ86UA6 219 aa8.03□□□□□ -1.12
LIN7C-201ENST00000278193 PNISRQ8TF01 805 aaKnown RBP8.03□□□□□ -1.12
LIN7C-201ENST00000278193 NUB1Q9Y5A7 615 aa8.03□□□□□ -1.12
LIN7C-201ENST00000278193 DMRT2Q9Y5R5 561 aa8.03□□□□□ -1.12
LIN7C-201ENST00000278193 NOP9Q86U38 636 aaKnown RBP8.03□□□□□ -1.12
LIN7C-201ENST00000278193 MSL3Q8N5Y2 521 aaKnown RBP8.03□□□□□ -1.12
LIN7C-201ENST00000278193 CTDP1Q9Y5B0 961 aaPredicted RBP8.03□□□□□ -1.12
LIN7C-201ENST00000278193 MRVI1Q9Y6F6 885 aa8.03□□□□□ -1.12
LIN7C-201ENST00000278193 FAM160A1Q05DH4 1040 aa8.03□□□□□ -1.12
LIN7C-201ENST00000278193 C9orf131Q5VYM1 1079 aa8.02□□□□□ -1.12
LIN7C-201ENST00000278193 MPHOSPH6Q99547 160 aaKnown RBP8.02□□□□□ -1.12
LIN7C-201ENST00000278193 ZSWIM4Q9H7M6 989 aa8.02□□□□□ -1.12
LIN7C-201ENST00000278193 CC2D2AQ9P2K1 1620 aa8.02□□□□□ -1.13
LIN7C-201ENST00000278193 TERF1P54274 439 aa8.02□□□□□ -1.13
LIN7C-201ENST00000278193 BRD3Q15059 726 aa8.02□□□□□ -1.13
LIN7C-201ENST00000278193 TAF3Q5VWG9 929 aa8.02□□□□□ -1.13
LIN7C-201ENST00000278193 B4GALNT3Q6L9W6 998 aa8.02□□□□□ -1.13
LIN7C-201ENST00000278193 PAGR1Q9BTK6 254 aa8.02□□□□□ -1.13
LIN7C-201ENST00000278193 GNL3LQ9NVN8 582 aaKnown RBP8.02□□□□□ -1.13
LIN7C-201ENST00000278193 ERBB3P21860 1342 aa8.01□□□□□ -1.13
LIN7C-201ENST00000278193 SETDB1Q15047 1291 aa8.01□□□□□ -1.13
LIN7C-201ENST00000278193 C11orf96Q7Z7L8 435 aa8.01□□□□□ -1.13
LIN7C-201ENST00000278193 DHX38Q92620 1227 aaKnown RBP8.01□□□□□ -1.13
LIN7C-201ENST00000278193 STAC3Q96MF2 364 aa8.01□□□□□ -1.13
LIN7C-201ENST00000278193 JADE2Q9NQC1 790 aa8.01□□□□□ -1.13
LIN7C-201ENST00000278193 SWAP70Q9UH65 585 aa8.01□□□□□ -1.13
LIN7C-201ENST00000278193 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
LIN7C-201ENST00000278193 NBPF9Q3BBW0 867 aa8.01□□□□□ -1.13
LIN7C-201ENST00000278193 MYCBPQ99417 103 aaPredicted RBP8.01□□□□□ -1.13
LIN7C-201ENST00000278193 WDR75Q8IWA0 830 aaKnown RBP8□□□□□ -1.13
LIN7C-201ENST00000278193 SDR16C5Q8N3Y7 309 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 FEZ2Q9UHY8 353 aaPredicted RBP8□□□□□ -1.13
LIN7C-201ENST00000278193 TOP2AP11388 1531 aaKnown RBP8□□□□□ -1.13
LIN7C-201ENST00000278193 SDE2Q6IQ49 451 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 PAIP2Q9BPZ3 127 aaKnown RBP8□□□□□ -1.13
LIN7C-201ENST00000278193 LNPKQ9C0E8 428 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 COG6Q9Y2V7 657 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 ZBTB12Q9Y330 459 aaPredicted RBP8□□□□□ -1.13
LIN7C-201ENST00000278193 GOLGA6L6A8MZA4 724 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 CC2D1AQ6P1N0 951 aaPredicted RBP8□□□□□ -1.13
LIN7C-201ENST00000278193 PDZRN4Q6ZMN7 1036 aaPredicted RBP8□□□□□ -1.13
LIN7C-201ENST00000278193 SOGA1O94964 1423 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 ATP2B1P20020 1258 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 GSE1Q14687 1217 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 CCDC96Q2M329 555 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 FNBP4Q8N3X1 1017 aaPredicted RBP8□□□□□ -1.13
LIN7C-201ENST00000278193 ABCF1Q8NE71 845 aaKnown RBP eCLIP8□□□□□ -1.13
LIN7C-201ENST00000278193 GLMNQ92990 594 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 GPATCH3Q96I76 525 aa8□□□□□ -1.13
LIN7C-201ENST00000278193 APLP1P51693 650 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 OTUD6BQ8N6M0 293 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 FAM13BQ9NYF5 915 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 FANCD2Q9BXW9 1451 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 EEA1Q15075 1411 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 PLIN1O60240 522 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 ZNF513Q8N8E2 541 aaPredicted RBP7.99□□□□□ -1.13
LIN7C-201ENST00000278193 NOP58Q9Y2X3 529 aaKnown RBP7.99□□□□□ -1.13
LIN7C-201ENST00000278193 RHBDL3P58872 404 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 C1orf131Q8NDD1 294 aaKnown RBP7.99□□□□□ -1.13
LIN7C-201ENST00000278193 TSPAN18Q96SJ8 248 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 SFMBT1Q9UHJ3 866 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 DYTNA2CJ06 578 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 GOLGA6L22H0YM25 854 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 PRM3Q9NNZ6 103 aa7.99□□□□□ -1.13
LIN7C-201ENST00000278193 FMNL3Q8IVF7 1028 aa7.98□□□□□ -1.13
LIN7C-201ENST00000278193 ITGAEP38570 1179 aa7.98□□□□□ -1.13
LIN7C-201ENST00000278193 MARSP56192 900 aaKnown RBP7.98□□□□□ -1.13
LIN7C-201ENST00000278193 TLDC2A0PJX2 215 aa7.98□□□□□ -1.13
LIN7C-201ENST00000278193 ARHGEF10LQ9HCE6 1279 aa7.98□□□□□ -1.13
LIN7C-201ENST00000278193 HMGN5P82970 282 aaKnown RBP7.97□□□□□ -1.13
LIN7C-201ENST00000278193 NBPF6Q5VWK0 638 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 CLEC4GQ6UXB4 293 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 NBPF5PQ86XG9 351 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms