RNA–Protein interactions for RNA: ENST00000261523.9

RORA-201, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best) BASIC

Gene RORA, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-201ENST00000261523 NCOA3Q9Y6Q9 1424 aa9.4□□□□□ -0.9
RORA-201ENST00000261523 CHGAP10645 457 aaKnown RBP9.4□□□□□ -0.9
RORA-201ENST00000261523 SLC26A8Q96RN1 970 aa9.4□□□□□ -0.9
RORA-201ENST00000261523 POLR3GLQ9BT43 218 aa9.4□□□□□ -0.9
RORA-201ENST00000261523 TMEM94Q12767 1356 aa9.4□□□□□ -0.9
RORA-201ENST00000261523 CNGB1Q14028 1251 aaPredicted RBP9.39□□□□□ -0.91
RORA-201ENST00000261523 SETBP1Q9Y6X0 1596 aa9.39□□□□□ -0.91
RORA-201ENST00000261523 ROCK2O75116 1388 aaKnown RBP9.39□□□□□ -0.91
RORA-201ENST00000261523 CLTCL1P53675 1640 aa9.39□□□□□ -0.91
RORA-201ENST00000261523 FAM135BQ49AJ0 1406 aa9.38□□□□□ -0.91
RORA-201ENST00000261523 MSH6P52701 1360 aa9.38□□□□□ -0.91
RORA-201ENST00000261523 HSPA1LP34931 641 aa9.38□□□□□ -0.91
RORA-201ENST00000261523 PROSER2Q86WR7 435 aaPredicted RBP9.38□□□□□ -0.91
RORA-201ENST00000261523 ADAMTS13Q76LX8 1427 aa9.37□□□□□ -0.91
RORA-201ENST00000261523 LRPPRCP42704 1394 aaKnown RBP9.37□□□□□ -0.91
RORA-201ENST00000261523 CARD11Q9BXL7 1154 aa9.37□□□□□ -0.91
RORA-201ENST00000261523 MED1Q15648 1581 aaPredicted RBP9.36□□□□□ -0.91
RORA-201ENST00000261523 SENP3-EIF4A1A0A087X0R7 540 aa9.35□□□□□ -0.91
RORA-201ENST00000261523 NEXMIFQ5QGS0 1516 aa9.35□□□□□ -0.91
RORA-201ENST00000261523 NRXN3Q9Y4C0 1643 aa9.35□□□□□ -0.91
RORA-201ENST00000261523 ST20-MTHFSA0A0A6YYL1 179 aa9.35□□□□□ -0.91
RORA-201ENST00000261523 TMC1Q8TDI8 760 aa9.35□□□□□ -0.91
RORA-201ENST00000261523 XRN1Q8IZH2 1706 aaKnown RBP9.35□□□□□ -0.91
RORA-201ENST00000261523 ROBO1Q9Y6N7 1651 aa9.35□□□□□ -0.91
RORA-201ENST00000261523 BRD4O60885 1362 aaPredicted RBP9.34□□□□□ -0.91
RORA-201ENST00000261523 DCCP43146 1447 aa9.34□□□□□ -0.91
RORA-201ENST00000261523 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
RORA-201ENST00000261523 TRPM1Q7Z4N2 1603 aa9.34□□□□□ -0.92
RORA-201ENST00000261523 DCAF8L1A6NGE4 600 aa9.33□□□□□ -0.92
RORA-201ENST00000261523 CCDC136Q96JN2 1154 aa9.33□□□□□ -0.92
RORA-201ENST00000261523 KDM2AQ9Y2K7 1162 aa9.33□□□□□ -0.92
RORA-201ENST00000261523 KTN1Q86UP2 1357 aaKnown RBP9.33□□□□□ -0.92
RORA-201ENST00000261523 MYBBP1AQ9BQG0 1328 aaKnown RBP9.33□□□□□ -0.92
RORA-201ENST00000261523 VGFO15240 615 aaPredicted RBP9.32□□□□□ -0.92
RORA-201ENST00000261523 PAK3O75914 559 aaPredicted RBP9.32□□□□□ -0.92
RORA-201ENST00000261523 RALBP1Q15311 655 aa9.32□□□□□ -0.92
RORA-201ENST00000261523 CADPS2Q86UW7 1296 aa9.32□□□□□ -0.92
RORA-201ENST00000261523 DCAF11Q8TEB1 546 aa9.32□□□□□ -0.92
RORA-201ENST00000261523 PPLO60437 1756 aa9.32□□□□□ -0.92
RORA-201ENST00000261523 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.32□□□□□ -0.92
RORA-201ENST00000261523 CCDC144AA2RUR9 1427 aa9.32□□□□□ -0.92
RORA-201ENST00000261523 C19orf44Q9H6X5 657 aa9.32□□□□□ -0.92
RORA-201ENST00000261523 NOP58Q9Y2X3 529 aaKnown RBP9.32□□□□□ -0.92
RORA-201ENST00000261523 NUTM2DQ5VT03 806 aaPredicted RBP9.31□□□□□ -0.92
RORA-201ENST00000261523 C14orf37Q86TY3 774 aa9.31□□□□□ -0.92
RORA-201ENST00000261523 SLAIN2Q9P270 581 aa9.31□□□□□ -0.92
RORA-201ENST00000261523 AMOTL2Q9Y2J4 779 aa9.31□□□□□ -0.92
RORA-201ENST00000261523 PRAG1Q86YV5 1406 aa9.31□□□□□ -0.92
RORA-201ENST00000261523 PHLPP1O60346 1717 aa9.3□□□□□ -0.92
RORA-201ENST00000261523 PARD3Q8TEW0 1356 aa9.3□□□□□ -0.92
RORA-201ENST00000261523 ATF3P18847 181 aa9.3□□□□□ -0.92
RORA-201ENST00000261523 SETD1AO15047 1707 aaKnown RBP9.3□□□□□ -0.92
RORA-201ENST00000261523 PTCH1Q13635 1447 aa9.29□□□□□ -0.92
RORA-201ENST00000261523 PTPRUQ92729 1446 aa9.29□□□□□ -0.92
RORA-201ENST00000261523 SOCS7O14512 581 aa9.29□□□□□ -0.92
RORA-201ENST00000261523 EIF5BO60841 1220 aaKnown RBP9.29□□□□□ -0.92
RORA-201ENST00000261523 RRP1P56182 461 aaKnown RBP9.29□□□□□ -0.92
RORA-201ENST00000261523 LAMC1P11047 1609 aa9.29□□□□□ -0.92
RORA-201ENST00000261523 AHDC1Q5TGY3 1603 aaPredicted RBP9.28□□□□□ -0.92
RORA-201ENST00000261523 IFT172Q9UG01 1749 aa9.28□□□□□ -0.92
RORA-201ENST00000261523 GPRASP1Q5JY77 1395 aa9.28□□□□□ -0.92
RORA-201ENST00000261523 PER1O15534 1290 aaPredicted RBP9.28□□□□□ -0.92
RORA-201ENST00000261523 ILDR2Q71H61 639 aa9.28□□□□□ -0.92
RORA-201ENST00000261523 EXOC6Q8TAG9 804 aa9.28□□□□□ -0.92
RORA-201ENST00000261523 RBM33Q96EV2 1170 aaKnown RBP9.28□□□□□ -0.92
RORA-201ENST00000261523 ADGRL3Q9HAR2 1447 aa9.28□□□□□ -0.92
RORA-201ENST00000261523 METP08581 1390 aa9.27□□□□□ -0.93
RORA-201ENST00000261523 NBPF1Q3BBV0 1214 aa9.27□□□□□ -0.93
RORA-201ENST00000261523 NLRP13Q86W25 1043 aa9.27□□□□□ -0.93
RORA-201ENST00000261523 IPO9Q96P70 1041 aaKnown RBP9.27□□□□□ -0.93
RORA-201ENST00000261523 COL16A1Q07092 1604 aaPredicted RBP9.27□□□□□ -0.93
RORA-201ENST00000261523 JCADQ9P266 1359 aa9.27□□□□□ -0.93
RORA-201ENST00000261523 DEKP35659 375 aaKnown RBP9.26□□□□□ -0.93
RORA-201ENST00000261523 RCAN3Q9UKA8 241 aa9.26□□□□□ -0.93
RORA-201ENST00000261523 NALCNQ8IZF0 1738 aa9.26□□□□□ -0.93
RORA-201ENST00000261523 SHPRHQ149N8 1683 aa9.25□□□□□ -0.93
RORA-201ENST00000261523 ANP32AP39687 249 aaKnown RBP9.25□□□□□ -0.93
RORA-201ENST00000261523 PDE3BQ13370 1112 aa9.25□□□□□ -0.93
RORA-201ENST00000261523 TESK2Q96S53 571 aa9.24□□□□□ -0.93
RORA-201ENST00000261523 ASXL1Q8IXJ9 1541 aa9.24□□□□□ -0.93
RORA-201ENST00000261523 NHSL1Q5SYE7 1610 aa9.24□□□□□ -0.93
RORA-201ENST00000261523 SALL2Q9Y467 1007 aaPredicted RBP9.24□□□□□ -0.93
RORA-201ENST00000261523 KNDC1Q76NI1 1749 aa9.24□□□□□ -0.93
RORA-201ENST00000261523 INSRP06213 1382 aa9.24□□□□□ -0.93
RORA-201ENST00000261523 BLMP54132 1417 aaPredicted RBP9.24□□□□□ -0.93
RORA-201ENST00000261523 MST1RQ04912 1400 aa9.24□□□□□ -0.93
RORA-201ENST00000261523 NBR1Q14596 966 aa9.23□□□□□ -0.93
RORA-201ENST00000261523 RGL3Q3MIN7 710 aa9.23□□□□□ -0.93
RORA-201ENST00000261523 CDCA7LQ96GN5 454 aa9.23□□□□□ -0.93
RORA-201ENST00000261523 SPATA31A6Q5VVP1 1343 aa9.23□□□□□ -0.93
RORA-201ENST00000261523 MYOM2P54296 1465 aa9.23□□□□□ -0.93
RORA-201ENST00000261523 TECPR2O15040 1411 aa9.22□□□□□ -0.93
RORA-201ENST00000261523 PIK3C2GO75747 1445 aa9.22□□□□□ -0.93
RORA-201ENST00000261523 CDC42BPGQ6DT37 1551 aa9.22□□□□□ -0.93
RORA-201ENST00000261523 TCERG1O14776 1098 aaKnown RBP9.22□□□□□ -0.93
RORA-201ENST00000261523 BRINP3Q76B58 766 aa9.22□□□□□ -0.93
RORA-201ENST00000261523 ZBTB47Q9UFB7 747 aaPredicted RBP9.22□□□□□ -0.93
RORA-201ENST00000261523 ROBO2Q9HCK4 1378 aa9.21□□□□□ -0.93
RORA-201ENST00000261523 NRXN1Q9ULB1 1477 aa9.21□□□□□ -0.94
RORA-201ENST00000261523 CC2D1BQ5T0F9 858 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms