RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
SORT1-201ENST00000256637 FAM161AQ3B820 660 aa20.75■□□□□ 0.91
SORT1-201ENST00000256637 SMG6Q86US8 1419 aaKnown RBP20.75■□□□□ 0.91
SORT1-201ENST00000256637 TRDNQ13061 729 aa20.75■□□□□ 0.91
SORT1-201ENST00000256637 SCAPERQ9BY12 1400 aa20.74■□□□□ 0.91
SORT1-201ENST00000256637 KAT6BQ8WYB5 2073 aa20.73■□□□□ 0.91
SORT1-201ENST00000256637 CFAP70Q5T0N1 1121 aa20.72■□□□□ 0.91
SORT1-201ENST00000256637 RRS1Q15050 365 aaKnown RBP20.72■□□□□ 0.91
SORT1-201ENST00000256637 MAP4K4O95819 1239 aaPredicted RBP20.72■□□□□ 0.91
SORT1-201ENST00000256637 BCL11BQ9C0K0 894 aaPredicted RBP20.72■□□□□ 0.91
SORT1-201ENST00000256637 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.72■□□□□ 0.918e-7■■■■■ 98.5
SORT1-201ENST00000256637 CPLX1O14810 134 aa20.71■□□□□ 0.91
SORT1-201ENST00000256637 USP47Q96K76 1375 aa20.71■□□□□ 0.91
SORT1-201ENST00000256637 CCDC34Q96HJ3 373 aa20.71■□□□□ 0.91
SORT1-201ENST00000256637 MTHFSP49914 203 aa20.71■□□□□ 0.91
SORT1-201ENST00000256637 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.91
SORT1-201ENST00000256637 SNAPC4Q5SXM2 1469 aa20.7■□□□□ 0.9
SORT1-201ENST00000256637 TTC39AQ5SRH9 613 aa20.7■□□□□ 0.9
SORT1-201ENST00000256637 USHBP1Q8N6Y0 703 aa20.7■□□□□ 0.9
SORT1-201ENST00000256637 PLEKHO1Q53GL0 409 aaPredicted RBP20.69■□□□□ 0.9
SORT1-201ENST00000256637 NLRP13Q86W25 1043 aa20.69■□□□□ 0.9
SORT1-201ENST00000256637 PIBF1Q8WXW3 757 aa20.69■□□□□ 0.9
SORT1-201ENST00000256637 GBP4Q96PP9 640 aa20.68■□□□□ 0.9
SORT1-201ENST00000256637 WASHC2AQ641Q2 1341 aa20.68■□□□□ 0.9
SORT1-201ENST00000256637 PAF1Q8N7H5 531 aa20.68■□□□□ 0.9
SORT1-201ENST00000256637 MPHOSPH10O00566 681 aaKnown RBP20.67■□□□□ 0.9
SORT1-201ENST00000256637 MYBBP1AQ9BQG0 1328 aaKnown RBP20.67■□□□□ 0.9
SORT1-201ENST00000256637 UBAP1LF5GYI3 381 aa20.67■□□□□ 0.9
SORT1-201ENST00000256637 LRRFIP1Q32MZ4 808 aaKnown RBP20.67■□□□□ 0.9
SORT1-201ENST00000256637 CRBNQ96SW2 442 aa20.67■□□□□ 0.9
SORT1-201ENST00000256637 ZKSCAN2Q63HK3 967 aa20.67■□□□□ 0.9
SORT1-201ENST00000256637 PTCD1O75127 700 aaKnown RBP20.67■□□□□ 0.9
SORT1-201ENST00000256637 ST18O60284 1047 aa20.66■□□□□ 0.9
SORT1-201ENST00000256637 R3HCC1Q9Y3T6 440 aaKnown RBP20.66■□□□□ 0.9
SORT1-201ENST00000256637 CABP1Q9NZU7 370 aa20.66■□□□□ 0.9
SORT1-201ENST00000256637 MPRIPQ6WCQ1 1025 aa20.66■□□□□ 0.9
SORT1-201ENST00000256637 C1orf115Q9H7X2 142 aa20.66■□□□□ 0.9
SORT1-201ENST00000256637 CCAR2Q8N163 923 aaKnown RBP20.65■□□□□ 0.9
SORT1-201ENST00000256637 MIA2Q96PC5 1412 aa20.65■□□□□ 0.9
SORT1-201ENST00000256637 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
SORT1-201ENST00000256637 TPM2P07951 284 aa20.65■□□□□ 0.9
SORT1-201ENST00000256637 ZFYVE27Q5T4F4 411 aa20.63■□□□□ 0.89
SORT1-201ENST00000256637 ATP2B1P20020 1258 aa20.63■□□□□ 0.89
SORT1-201ENST00000256637 C8orf37Q96NL8 207 aa20.63■□□□□ 0.89
SORT1-201ENST00000256637 UBTFL1P0CB47 393 aaPredicted RBP20.63■□□□□ 0.89
SORT1-201ENST00000256637 WWC2Q6AWC2 1192 aa20.63■□□□□ 0.89
SORT1-201ENST00000256637 WDR70Q9NW82 654 aa20.62■□□□□ 0.89
SORT1-201ENST00000256637 ZPR1O75312 459 aa20.62■□□□□ 0.89
SORT1-201ENST00000256637 WDR78Q5VTH9 848 aa20.62■□□□□ 0.89
SORT1-201ENST00000256637 SULT6B1Q6IMI4 303 aa20.61■□□□□ 0.89
SORT1-201ENST00000256637 SPG7Q9UQ90 795 aa20.61■□□□□ 0.89
SORT1-201ENST00000256637 WAPLQ7Z5K2 1190 aa20.61■□□□□ 0.89
SORT1-201ENST00000256637 SLC4A8Q2Y0W8 1093 aa20.61■□□□□ 0.89
SORT1-201ENST00000256637 ZNF530Q6P9A1 599 aaPredicted RBP20.61■□□□□ 0.89
SORT1-201ENST00000256637 MIS18AQ9NYP9 233 aa20.61■□□□□ 0.89
SORT1-201ENST00000256637 SYNJ2O15056 1496 aa20.6■□□□□ 0.89
SORT1-201ENST00000256637 TSR1Q2NL82 804 aaKnown RBP20.6■□□□□ 0.89
SORT1-201ENST00000256637 TPM3P06753 285 aa20.59■□□□□ 0.89
SORT1-201ENST00000256637 ACSBG1Q96GR2 724 aa20.59■□□□□ 0.89
SORT1-201ENST00000256637 MPHOSPH8Q99549 860 aa20.59■□□□□ 0.89
SORT1-201ENST00000256637 POGZQ7Z3K3 1410 aa20.59■□□□□ 0.89
SORT1-201ENST00000256637 VSIG10Q8N0Z9 540 aa20.59■□□□□ 0.89
SORT1-201ENST00000256637 SPDYE4A6NLX3 237 aa20.59■□□□□ 0.89
SORT1-201ENST00000256637 BTBD11A6QL63 1104 aa20.58■□□□□ 0.89
SORT1-201ENST00000256637 CSPP1Q1MSJ5 1256 aa20.58■□□□□ 0.89
SORT1-201ENST00000256637 SYAP1Q96A49 352 aaPredicted RBP20.58■□□□□ 0.89
SORT1-201ENST00000256637 GRIN2BQ13224 1484 aa20.58■□□□□ 0.89
SORT1-201ENST00000256637 RALYLQ86SE5 291 aaKnown RBP20.58■□□□□ 0.89
SORT1-201ENST00000256637 RUFY2Q8WXA3 655 aa20.57■□□□□ 0.88
SORT1-201ENST00000256637 PATL2C9JE40 543 aaKnown RBP20.57■□□□□ 0.88
SORT1-201ENST00000256637 PPM1FP49593 454 aaPredicted RBP20.57■□□□□ 0.88
SORT1-201ENST00000256637 TBC1D2BQ9UPU7 963 aa20.57■□□□□ 0.88
SORT1-201ENST00000256637 KIF3AQ9Y496 699 aa20.57■□□□□ 0.88
SORT1-201ENST00000256637 CCER2I3L3R5 266 aa20.56■□□□□ 0.88
SORT1-201ENST00000256637 PRKAR2BP31323 418 aa20.56■□□□□ 0.88
SORT1-201ENST00000256637 CPLX2Q6PUV4 134 aaKnown RBP20.56■□□□□ 0.88
SORT1-201ENST00000256637 RUNDC1Q96C34 613 aa20.56■□□□□ 0.88
SORT1-201ENST00000256637 ANKIB1Q9P2G1 1089 aa20.56■□□□□ 0.88
SORT1-201ENST00000256637 NAP1L1P55209 391 aaKnown RBP20.55■□□□□ 0.88
SORT1-201ENST00000256637 FSD1Q9BTV5 496 aa20.55■□□□□ 0.88
SORT1-201ENST00000256637 CLEC11AQ9Y240 323 aa20.55■□□□□ 0.88
SORT1-201ENST00000256637 E9PSI1 815 aa20.55■□□□□ 0.88
SORT1-201ENST00000256637 MATR3P43243 847 aaKnown RBP eCLIP20.55■□□□□ 0.888e-7■■■■□ 20.3
SORT1-201ENST00000256637 ZNF622Q969S3 477 aaKnown RBP eCLIP20.55■□□□□ 0.88
SORT1-201ENST00000256637 FKBP4Q02790 459 aaKnown RBP eCLIP20.55■□□□□ 0.88
SORT1-201ENST00000256637 VPS37CA5D8V6 355 aaPredicted RBP20.55■□□□□ 0.88
SORT1-201ENST00000256637 LNPKQ9C0E8 428 aa20.55■□□□□ 0.88
SORT1-201ENST00000256637 EPS15P42566 896 aa20.54■□□□□ 0.88
SORT1-201ENST00000256637 C16orf71Q8IYS4 520 aaPredicted RBP20.54■□□□□ 0.88
SORT1-201ENST00000256637 PLCD3Q8N3E9 789 aa20.54■□□□□ 0.88
SORT1-201ENST00000256637 FOXO3O43524 673 aa20.54■□□□□ 0.88
SORT1-201ENST00000256637 EXOC6Q8TAG9 804 aa20.53■□□□□ 0.88
SORT1-201ENST00000256637 ZKSCAN1P17029 563 aaPredicted RBP20.53■□□□□ 0.88
SORT1-201ENST00000256637 ZHX3Q9H4I2 956 aa20.53■□□□□ 0.88
SORT1-201ENST00000256637 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.88
SORT1-201ENST00000256637 CT47A1Q5JQC4 288 aaPredicted RBP20.52■□□□□ 0.88
SORT1-201ENST00000256637 PANK1Q8TE04 598 aa20.52■□□□□ 0.88
SORT1-201ENST00000256637 ODF2Q5BJF6 829 aa20.52■□□□□ 0.87
SORT1-201ENST00000256637 SLC12A5Q9H2X9 1139 aa20.52■□□□□ 0.87
SORT1-201ENST00000256637 RTEL1-TNFRSF6BF6WH68 1400 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms