RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Anp32bQ9EST5 272 aaKnown RBP16.86■□□□□ 0.29
Prpf40a-206ENSMUST00000209364 Kdm5aQ3UXZ9 1690 aa16.85■□□□□ 0.29
Prpf40a-206ENSMUST00000209364 Lrrc7Q80TE7 1490 aa16.85■□□□□ 0.29
Prpf40a-206ENSMUST00000209364 Rtn4Q99P72 1162 aaKnown RBP16.84■□□□□ 0.29
Prpf40a-206ENSMUST00000209364 PalldQ9ET54 1408 aa16.84■□□□□ 0.29
Prpf40a-206ENSMUST00000209364 Slc52a2Q9D8F3 450 aa16.84■□□□□ 0.29
Prpf40a-206ENSMUST00000209364 Prrc2bQ7TPM1 1486 aaKnown RBP16.84■□□□□ 0.29
Prpf40a-206ENSMUST00000209364 Fam184bQ0KK56 942 aa16.83■□□□□ 0.29
Prpf40a-206ENSMUST00000209364 PtprmP28828 1452 aa16.83■□□□□ 0.28
Prpf40a-206ENSMUST00000209364 Itsn1Q9Z0R4 1714 aa16.82■□□□□ 0.28
Prpf40a-206ENSMUST00000209364 Slc4a3P16283 1227 aa16.82■□□□□ 0.28
Prpf40a-206ENSMUST00000209364 Rpgrip1lQ8CG73 1264 aa16.82■□□□□ 0.28
Prpf40a-206ENSMUST00000209364 MaddQ80U28 1577 aa16.8■□□□□ 0.28
Prpf40a-206ENSMUST00000209364 Stag3O70576 1240 aa16.78■□□□□ 0.28
Prpf40a-206ENSMUST00000209364 Tex14Q7M6U3 1450 aa16.78■□□□□ 0.28
Prpf40a-206ENSMUST00000209364 Arhgef28P97433 1693 aa16.77■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Naip7Q9JIB3 1402 aa16.76■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Zscan21Q07231 555 aa16.76■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 IqubQ8CDK3 788 aa16.76■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Gtf2a1Q99PM3 378 aa16.75■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Adamtsl3G3UXC7 1706 aa16.75■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Taok2Q6ZQ29 1240 aa16.75■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Q7TT23 1179 aa16.75■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 P3h3Q8CG70 732 aa16.74■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Tcerg1Q8CGF7 1100 aaKnown RBP16.74■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Zc3h13E9Q784 1729 aaKnown RBP16.74■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Ercc6l2Q9JIM3 1537 aa16.74■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 InsrP15208 1372 aa16.73■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Shq1Q7TMX5 569 aa16.72■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Dnajc5gQ8C632 165 aa16.72■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Gtf3c5Q8R2T8 520 aa16.72■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Atp1b4Q99ME6 356 aa16.72■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Rab3gap2Q8BMG7 1366 aa16.72■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Ppp2r1aQ76MZ3 589 aa16.71■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 Ofd1Q80Z25 1017 aa16.71■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 NgefQ8CHT1 710 aa16.71■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 DmtnQ9WV69 405 aa16.71■□□□□ 0.27
Prpf40a-206ENSMUST00000209364 CenpjQ569L8 1344 aa16.7■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Eif2ak4Q9QZ05 1648 aa16.7■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Med14A2ABV5 1459 aaKnown RBP16.69■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 PplQ9R269 1755 aa16.69■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Kif7B7ZNG0 1348 aa16.69■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 ChgaP26339 463 aaKnown RBP16.68■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Dnttip2Q8R2M2 758 aaKnown RBP16.68■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Stk26Q99JT2 416 aa16.68■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Cep170bQ80U49 1574 aa16.68■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Gprasp1Q5U4C1 1347 aa16.67■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Cnga1P29974 684 aa16.67■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Dcaf11Q91VU6 549 aa16.67■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Znf692Q3U381 531 aa16.66■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Mak16Q8BGS0 296 aaKnown RBP16.66■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 BccipQ9CWI3 316 aa16.66■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Q9D9H8 365 aa16.66■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Chd2E9PZM4 1827 aaKnown RBP16.65■□□□□ 0.26
Prpf40a-206ENSMUST00000209364 Rrp9Q91WM3 475 aaKnown RBP16.64■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Abca14E9Q8F8 1683 aa16.63■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Atf7ipQ7TT18 1306 aa16.63■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 CatipB9EKE5 520 aa16.63■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Dip2aQ8BWT5 1523 aa16.63■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Plekhg1F6S200 1446 aa16.62■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 KdrP35918 1367 aa16.61■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Gemin5Q8BX17 1502 aaKnown RBP16.6■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 AU015836B2RUM3 263 aa16.6■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Utp14aQ640M1 767 aaKnown RBP16.6■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Nrxn1Q9CS84 1514 aa16.59■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Mink1Q9JM52 1308 aa16.59■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Plppr3Q7TPB0 716 aa16.59■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Zfp444Q3TDV8 331 aaKnown RBP16.58■□□□□ 0.25
Prpf40a-206ENSMUST00000209364 Exosc9Q9JHI7 438 aaKnown RBP16.58■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Nwd1A6H603 1563 aa16.57■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Esx1O88933 382 aa16.56■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Prdm10Q3UTQ7 1184 aa16.56■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Safb2Q80YR5 991 aaKnown RBP16.56■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Nlrp6Q91WS2 869 aa16.56■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Txndc2Q6P902 515 aa16.55■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Atp2b2Q9R0K7 1198 aa16.55■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Psme1P97371 249 aa16.55■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 NktrP30415 1453 aa16.55■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 L3mbtl2P59178 703 aa16.55■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Asxl2Q8BZ32 1370 aa16.54■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Kcnh8P59111 1102 aa16.54■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Gsto1O09131 240 aa16.54■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Scaf11E9PZM7 1456 aaKnown RBP16.53■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Dip2bQ3UH60 1574 aa16.53■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Znf316Q6PGE4 1016 aa16.52■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Zranb1Q7M760 708 aa16.52■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Kank1E9Q238 1360 aa16.52■□□□□ 0.24
Prpf40a-206ENSMUST00000209364 Cdk19Q8BWD8 501 aa16.51■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Slit3Q9WVB4 1523 aa16.51■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Scaf1Q5U4C3 1256 aaKnown RBP16.51■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Rad21Q61550 635 aaKnown RBP16.51■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Adgrl1Q80TR1 1466 aa16.51■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Kiaa1107Q80TK0 1369 aa16.49■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 IbtkQ6ZPR6 1352 aaKnown RBP16.49■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Kif16bB1AVY7 1312 aa16.48■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 IghaA0A0A6YXW6 389 aa16.48■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Cald1E9QA15 768 aaKnown RBP16.48■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 FanciQ8K368 1330 aa16.48■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Cps1Q8C196 1500 aa16.47■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 CrbnQ8C7D2 445 aa16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms