RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Zscan21Q07231 555 aa17.91■□□□□ 0.46
Rnf4-204ENSMUST00000182047 Zranb1Q7M760 708 aa17.91■□□□□ 0.46
Rnf4-204ENSMUST00000182047 Ofd1Q80Z25 1017 aa17.91■□□□□ 0.46
Rnf4-204ENSMUST00000182047 Ppp2r1aQ76MZ3 589 aa17.9■□□□□ 0.46
Rnf4-204ENSMUST00000182047 Asxl2Q8BZ32 1370 aa17.9■□□□□ 0.46
Rnf4-204ENSMUST00000182047 Kcnh8P59111 1102 aa17.9■□□□□ 0.46
Rnf4-204ENSMUST00000182047 Kif7B7ZNG0 1348 aa17.9■□□□□ 0.46
Rnf4-204ENSMUST00000182047 Kdm5aQ3UXZ9 1690 aa17.89■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Cep170bQ80U49 1574 aa17.88■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Ift172Q6VH22 1749 aa17.88■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Mink1Q9JM52 1308 aa17.87■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Liat1Q810M6 228 aa17.87■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Adamtsl3G3UXC7 1706 aa17.87■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Tex14Q7M6U3 1450 aa17.86■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Safb2Q80YR5 991 aaKnown RBP17.86■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Utp14aQ640M1 767 aaKnown RBP17.85■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Arhgef28P97433 1693 aa17.84■□□□□ 0.45
Rnf4-204ENSMUST00000182047 CenpjQ569L8 1344 aa17.84■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Rab3gap2Q8BMG7 1366 aa17.84■□□□□ 0.45
Rnf4-204ENSMUST00000182047 MaddQ80U28 1577 aa17.84■□□□□ 0.45
Rnf4-204ENSMUST00000182047 Txndc2Q6P902 515 aa17.83■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Pcdh10E9PXQ7 1057 aa17.82■□□□□ 0.44
Rnf4-204ENSMUST00000182047 InsrP15208 1372 aa17.82■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Esx1O88933 382 aa17.82■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Rad21Q61550 635 aaKnown RBP17.81■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Arid4bA2CG63 1314 aaKnown RBP17.81■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Exosc9Q9JHI7 438 aaKnown RBP17.81■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Psme1P97371 249 aa17.8■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Mak16Q8BGS0 296 aaKnown RBP17.8■□□□□ 0.44
Rnf4-204ENSMUST00000182047 IghaA0A0A6YXW6 389 aa17.79■□□□□ 0.44
Rnf4-204ENSMUST00000182047 PrkcshO08795 521 aa17.79■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Atp2b2Q9R0K7 1198 aa17.79■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Med14A2ABV5 1459 aaKnown RBP17.79■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Zfp444Q3TDV8 331 aaKnown RBP17.77■□□□□ 0.44
Rnf4-204ENSMUST00000182047 Nlrp6Q91WS2 869 aa17.77■□□□□ 0.43
Rnf4-204ENSMUST00000182047 L3mbtl2P59178 703 aa17.76■□□□□ 0.43
Rnf4-204ENSMUST00000182047 Egfem1Q8C088 590 aa17.76■□□□□ 0.43
Rnf4-204ENSMUST00000182047 Zc3h13E9Q784 1729 aaKnown RBP17.76■□□□□ 0.43
Rnf4-204ENSMUST00000182047 Gprasp1Q5U4C1 1347 aa17.74■□□□□ 0.43
Rnf4-204ENSMUST00000182047 Cdk19Q8BWD8 501 aa17.74■□□□□ 0.43
Rnf4-204ENSMUST00000182047 Abca14E9Q8F8 1683 aa17.74■□□□□ 0.43
Rnf4-204ENSMUST00000182047 CrbnQ8C7D2 445 aa17.73■□□□□ 0.43
Rnf4-204ENSMUST00000182047 PplQ9R269 1755 aa17.72■□□□□ 0.43
Rnf4-204ENSMUST00000182047 Gsto1O09131 240 aa17.71■□□□□ 0.43
Rnf4-204ENSMUST00000182047 Chd2E9PZM4 1827 aaKnown RBP17.7■□□□□ 0.42
Rnf4-204ENSMUST00000182047 Eif2ak4Q9QZ05 1648 aa17.7■□□□□ 0.42
Rnf4-204ENSMUST00000182047 P2rx7Q9Z1M0 595 aa17.69■□□□□ 0.42
Rnf4-204ENSMUST00000182047 Dip2aQ8BWT5 1523 aa17.69■□□□□ 0.42
Rnf4-204ENSMUST00000182047 Atf7ipQ7TT18 1306 aa17.68■□□□□ 0.42
Rnf4-204ENSMUST00000182047 Znf316Q6PGE4 1016 aa17.68■□□□□ 0.42
Rnf4-204ENSMUST00000182047 Erbb3Q61526 1339 aa17.68■□□□□ 0.42
Rnf4-204ENSMUST00000182047 Scaf11E9PZM7 1456 aaKnown RBP17.67■□□□□ 0.42
Rnf4-204ENSMUST00000182047 Kiaa1107Q80TK0 1369 aa17.67■□□□□ 0.42
Rnf4-204ENSMUST00000182047 NktrP30415 1453 aa17.66■□□□□ 0.42
Rnf4-204ENSMUST00000182047 Plekhg1F6S200 1446 aa17.66■□□□□ 0.42
Rnf4-204ENSMUST00000182047 MyclP10166 368 aa17.66■□□□□ 0.42
Rnf4-204ENSMUST00000182047 Nrxn1Q9CS84 1514 aa17.65■□□□□ 0.42
Rnf4-204ENSMUST00000182047 HnrnpmQ9D0E1 729 aaKnown RBP17.65■□□□□ 0.42
Rnf4-204ENSMUST00000182047 Nwd1A6H603 1563 aa17.64■□□□□ 0.41
Rnf4-204ENSMUST00000182047 NinlQ6ZQ12 1394 aa17.64■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Cald1E9QA15 768 aaKnown RBP17.64■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Kif16bB1AVY7 1312 aa17.63■□□□□ 0.41
Rnf4-204ENSMUST00000182047 IbtkQ6ZPR6 1352 aaKnown RBP17.62■□□□□ 0.41
Rnf4-204ENSMUST00000182047 4930407I10RikD3Z5T8 1512 aa17.62■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Dip2bQ3UH60 1574 aa17.62■□□□□ 0.41
Rnf4-204ENSMUST00000182047 KdrP35918 1367 aa17.61■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Usp19Q3UJD6 1360 aa17.61■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Dnajc5P60904 198 aa17.61■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Tcerg1Q8CGF7 1100 aaKnown RBP17.61■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Gemin5Q8BX17 1502 aaKnown RBP17.61■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Neurod2Q62414 383 aa17.6■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Golga2Q921M4 999 aa17.6■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Map3k19E9Q3S4 1311 aa17.6■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Kank1E9Q238 1360 aa17.59■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Speer4f1Q9D5Q6 258 aa17.59■□□□□ 0.41
Rnf4-204ENSMUST00000182047 Slit3Q9WVB4 1523 aa17.58■□□□□ 0.4
Rnf4-204ENSMUST00000182047 GsdmaQ9EST1 446 aa17.58■□□□□ 0.4
Rnf4-204ENSMUST00000182047 FanciQ8K368 1330 aa17.58■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Ccdc27Q3V036 639 aa17.58■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Ipo9Q91YE6 1041 aa17.57■□□□□ 0.4
Rnf4-204ENSMUST00000182047 ChgaP26339 463 aaKnown RBP17.57■□□□□ 0.4
Rnf4-204ENSMUST00000182047 NeflP08551 543 aa17.56■□□□□ 0.4
Rnf4-204ENSMUST00000182047 PzpQ61838 1495 aa17.56■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Adgrl1Q80TR1 1466 aa17.56■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Usp32F8VPZ3 1604 aa17.54■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Ecm2Q5FW85 670 aa17.54■□□□□ 0.4
Rnf4-204ENSMUST00000182047 MlecQ6ZQI3 291 aaKnown RBP17.54■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Tsen2Q6P7W5 460 aa17.53■□□□□ 0.4
Rnf4-204ENSMUST00000182047 U2af1Q9D883 239 aaKnown RBP17.53■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Uspl1Q3ULM6 1089 aa17.52■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Cps1Q8C196 1500 aa17.52■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Pik3c2bE9QAN8 1632 aa17.52■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Apaf1O88879 1249 aa17.52■□□□□ 0.4
Rnf4-204ENSMUST00000182047 Upf2A2AT37 1269 aaKnown RBP17.51■□□□□ 0.39
Rnf4-204ENSMUST00000182047 Ccdc30Q8BVF4 654 aa17.51■□□□□ 0.39
Rnf4-204ENSMUST00000182047 B4galnt3Q6L8S8 986 aa17.5■□□□□ 0.39
Rnf4-204ENSMUST00000182047 NgefQ8CHT1 710 aa17.5■□□□□ 0.39
Rnf4-204ENSMUST00000182047 Birc3O08863 600 aa17.49■□□□□ 0.39
Rnf4-204ENSMUST00000182047 Q3UJC8 639 aa17.49■□□□□ 0.39
Rnf4-204ENSMUST00000182047 Gas2l2Q5SSG4 860 aa17.49■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms