RNA–Protein interactions for RNA: ENSMUST00000179869.2

Hmgcs1-201, Transcript of Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgcs1, Length 3,245 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1-201ENSMUST00000179869 Gli2Q0VGT2 1544 aa11.7□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Ppp1r3fQ9JIG4 799 aa11.69□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Nos1Q9Z0J4 1429 aa11.69□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Zmym4A2A791 1549 aaKnown RBP11.69□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Kank1E9Q238 1360 aa11.69□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Nectin2P32507 530 aa11.69□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Pibf1E9Q6K3 756 aa11.69□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Arid4bA2CG63 1314 aaKnown RBP11.68□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Abca9Q8K449 1623 aa11.68□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Psme1P97371 249 aa11.68□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Cdk19Q8BWD8 501 aa11.67□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Mcm10Q0VBD2 885 aa11.67□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Tmco5bQ80X59 307 aa11.67□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Znf518aB2RRF6 1478 aaKnown RBP11.66□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 MyclP10166 368 aa11.66□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Cfap65Q3V0B4 1847 aa11.66□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Kiaa1107Q80TK0 1369 aa11.66□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Robo2Q7TPD3 1470 aa11.66□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 CenpjQ569L8 1344 aa11.66□□□□□ -0.54
Hmgcs1-201ENSMUST00000179869 Spryd3E9Q9B3 442 aa11.64□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 U2surpQ6NV83 1029 aaKnown RBP11.64□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Ppip5k1A2ARP1 1436 aa11.64□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Cald1E9QA15 768 aaKnown RBP11.64□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Gtf3c3Q3TMP1 882 aa11.64□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 EspnQ9ET47 871 aa11.64□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Hsp90ab1P11499 724 aaKnown RBP11.63□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Eif2s2Q99L45 331 aaKnown RBP11.63□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Usp19Q3UJD6 1360 aa11.63□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Irx3P81067 507 aa11.63□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Dusp27Q148W8 1138 aa11.63□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Dnai1Q8C0M8 701 aa11.63□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Plcd4Q8K3R3 807 aa11.63□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Tex14Q7M6U3 1450 aa11.63□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Mapk8ip3Q9ESN9 1337 aa11.63□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 AnkarA2RT91 1465 aa11.62□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Ak9G3UYQ4 1894 aa11.62□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Plch2A2AP18 1501 aa11.62□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Gsto1O09131 240 aa11.62□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Prrc2bQ7TPM1 1486 aaKnown RBP11.61□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Clasp1Q80TV8 1535 aaKnown RBP11.61□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 HnrnpmQ9D0E1 729 aaKnown RBP11.61□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 NinlQ6ZQ12 1394 aa11.61□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Uspl1Q3ULM6 1089 aa11.6□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Pdcd11Q6NS46 1862 aaKnown RBP11.6□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Pnmal2G3X9N3 661 aa11.6□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 NudcO35685 332 aaKnown RBP11.6□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Lrrc7Q80TE7 1490 aa11.6□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Ccdc60Q8C4J0 545 aa11.6□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Plekhh1Q80TI1 1356 aa11.6□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 AdgbG3UZ78 1657 aa11.6□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Prex1Q69ZK0 1650 aa11.59□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Aplp1Q03157 653 aa11.59□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Slc12a5Q91V14 1138 aa11.59□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 PalmQ9Z0P4 383 aa11.59□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Sbno1Q689Z5 1390 aa11.59□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Stard8Q8K031 1019 aa11.59□□□□□ -0.55
Hmgcs1-201ENSMUST00000179869 Hecw1Q8K4P8 1604 aa11.58□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Klhdc4Q921I2 584 aa11.58□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Ak7Q9D2H2 614 aa11.58□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Nphp4P59240 1425 aa11.57□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 KarsQ99MN1 595 aaKnown RBP11.57□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Rlbp1Q9Z275 317 aa11.57□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Dip2cE9PWR4 1557 aa11.56□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Myo5cE9Q1F5 1742 aa11.56□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Skint5A7XUY5 1461 aa11.56□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Ttc37F8VPK0 1563 aa11.56□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 MpripP97434 1024 aa11.56□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Cabp2Q9JLK4 216 aa11.56□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Nkx1-2P42580 305 aa11.55□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Iqgap3F8VQ29 1632 aa11.55□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 IghaA0A0A6YXW6 389 aa11.55□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Ralbp1Q62172 648 aa11.55□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 IbtkQ6ZPR6 1352 aaKnown RBP11.55□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Cep170bQ80U49 1574 aa11.54□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 PalldQ9ET54 1408 aa11.54□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Ppm1gQ61074 542 aa11.54□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Mbd3Q9Z2D8 285 aaKnown RBP11.54□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Uggt2E9Q4X2 1504 aa11.53□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Duxf3A0A0N4SV92 674 aa11.53□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Rbm25B2RY56 838 aaKnown RBP11.53□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Tnnt1O88346 262 aa11.53□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Scaf11E9PZM7 1456 aaKnown RBP11.53□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Fndc1E9Q043 1732 aa11.52□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Slc52a2Q9D8F3 450 aa11.52□□□□□ -0.56
Hmgcs1-201ENSMUST00000179869 Rims1Q99NE5 1463 aa11.52□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Ipo8Q7TMY7 1010 aa11.52□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Cc2d1aQ8K1A6 943 aa11.52□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Snap23O09044 210 aa11.51□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Adgrb3Q80ZF8 1522 aa11.51□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Ccdc9Q8VC31 543 aaKnown RBP11.5□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Q4VA45 678 aa11.5□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Neurl4Q5NCX5 1563 aa11.5□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Abca17E9PX95 1733 aa11.5□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Kdm2bQ6P1G2 1309 aa11.5□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Efcab6Q6P1E8 1516 aa11.5□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Tubgcp6G5E8P0 1769 aa11.49□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Trim58Q5NCC9 485 aa11.49□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Ccar1Q8CH18 1146 aaKnown RBP11.49□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 AglF8VPN4 1532 aa11.49□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Maco1Q7TQE6 664 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms