RNA–Protein interactions for RNA: ENSMUST00000172332.3

Ccdc71l-201, Transcript of Coiled-coil domain-containing 71-like, mousemouse

APPRIS P1 BASIC

Gene Ccdc71l, Length 4,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71l-201ENSMUST00000172332 Cabp2Q9JLK4 216 aa19.43■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 Becn1O88597 448 aa19.43■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 Utp3Q9JI13 469 aaKnown RBP19.42■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 Cetn4Q8K4K1 168 aa19.41■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 Ubap1lG3UW59 384 aa19.41■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 HdgfP51859 237 aaKnown RBP19.41■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 Neurod6P48986 337 aa19.4■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 Tnnt2P50752 301 aa19.4■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 Sh3bgrQ9WUZ7 214 aa19.4■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 Kif18aQ91WD7 886 aa19.4■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 4933402E13RikQ9D4D2 429 aa19.4■□□□□ 0.7
Ccdc71l-201ENSMUST00000172332 Cdk19Q8BWD8 501 aa19.39■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 FanciQ8K368 1330 aa19.39■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Ush1cQ9ES64 910 aa19.39■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Stk3Q9JI10 497 aa19.39■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Slx4Q6P1D7 1565 aa19.39■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Ccdc141E9Q8Q6 1531 aa19.39■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 FosbP13346 338 aa19.38■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Ggnbp2Q5SV77 696 aa19.38■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Trim30aP15533 496 aa19.37■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 RdxP26043 583 aaKnown RBP19.37■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Babam1Q3UI43 333 aa19.37■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Nap1l3Q794H2 544 aa19.37■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Cyp46a1Q9WVK8 500 aa19.37■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Fyb1O35601 819 aa19.36■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 PalmQ9Z0P4 383 aa19.36■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 AampJ3QN89 436 aa19.36■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Maco1Q7TQE6 664 aaKnown RBP19.36■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 IbspQ61711 324 aa19.36■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 SynmQ70IV5 1561 aa19.35■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Liat1Q810M6 228 aa19.35■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Chmp7Q8R1T1 451 aa19.35■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Gripap1Q8VD04 806 aa19.35■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Ccdc171E9Q1U1 1324 aa19.35■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.34■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Mad1l1Q9WTX8 717 aaKnown RBP19.34■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Rprd2Q6NXI6 1469 aaKnown RBP19.34■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Usp48Q3V0C5 1052 aa19.34■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 TatQ8QZR1 454 aa19.34■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Smc3Q9CW03 1217 aaKnown RBP19.33■□□□□ 0.69
Ccdc71l-201ENSMUST00000172332 Q8C5K5 320 aa19.33■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 KinQ8K339 391 aa19.33■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Disp1Q3TDN0 1521 aa19.33■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Tfip11Q9ERA6 838 aaKnown RBP19.33■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 BccipQ9CWI3 316 aa19.32■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Mphosph10Q810V0 681 aaKnown RBP19.31■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Bicd2Q921C5 820 aa19.31■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Ankrd26Q811D2 1581 aa19.31■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Magi1Q6RHR9 1471 aa19.31■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Sptbn5F6UCX4 1208 aa19.31■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Fkbp4P30416 458 aa19.31■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Gm156Q58A37 223 aa19.3■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Kif4P33174 1231 aa19.3■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Ssh1Q76I79 1042 aa19.3■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Zranb1Q7M760 708 aa19.3■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Pip4k2bQ80XI4 416 aa19.29■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Smc5Q8CG46 1101 aaKnown RBP19.29■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Ttc21bQ0HA38 1315 aa19.29■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Cspp1B2RX88 1205 aa19.29■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Gm10471E9Q1C7 252 aa19.28■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Cdc37l1Q9CZP7 335 aa19.28■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Glipr1l2Q9CQ35 332 aa19.27■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 HnrnpmQ9D0E1 729 aaKnown RBP19.27■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Tpm3-rs7D3Z2H9 248 aa19.27■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Cwc27Q3TKY6 469 aa19.27■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Tomm22Q9CPQ3 142 aa19.27■□□□□ 0.68
Ccdc71l-201ENSMUST00000172332 Gprasp1Q5U4C1 1347 aa19.27■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Gm1043A0A140LJC2 1431 aa19.27■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Jakmip1Q8BVL9 626 aa19.26■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Fam135aQ6NS59 1506 aa19.26■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Polr3aB2RXC6 1390 aa19.26■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 PxdnQ3UQ28 1475 aa19.26■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Zkscan2G3X952 960 aa19.25■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 BcanQ61361 883 aa19.25■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Rab11fip3Q8CHD8 1047 aa19.24■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Ncoa3O09000 1398 aa19.24■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Asxl1P59598 1514 aa19.24■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Smc4Q8CG47 1286 aa19.24■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Gpatch8A2A6A1 1505 aa19.24■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 1700010I14RikQ7TPG0 532 aa19.24■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Wdr78E9PYY5 807 aa19.24■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Map3k13Q1HKZ5 959 aa19.24■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Ddx11Q6AXC6 880 aa19.23■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 HypkQ9CR41 129 aa19.23■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Nphp1Q9QY53 687 aa19.23■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 CarsQ9ER72 831 aaKnown RBP19.23■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Gnai2P08752 355 aaKnown RBP19.22■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Rnf20Q5DTM8 973 aa19.22■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Ythdc2B2RR83 1445 aaKnown RBP19.22■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Aplp1Q03157 653 aa19.21■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Erc2Q6PH08 957 aa19.21■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Tpd52l1O54818 204 aa19.21■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Srgap3Q812A2 1099 aa19.21■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Mcm2P97310 904 aa19.21■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Gsdma3Q5Y4Y6 464 aa19.21■□□□□ 0.67
Ccdc71l-201ENSMUST00000172332 Smarca5Q91ZW3 1051 aaKnown RBP19.21■□□□□ 0.66
Ccdc71l-201ENSMUST00000172332 Q4VA45 678 aa19.2■□□□□ 0.66
Ccdc71l-201ENSMUST00000172332 TmpoQ61033 693 aaKnown RBP19.2■□□□□ 0.66
Ccdc71l-201ENSMUST00000172332 Znf692Q3U381 531 aa19.2■□□□□ 0.66
Ccdc71l-201ENSMUST00000172332 Zkscan1Q8BGS3 561 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms