RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Ms4a1P19437 291 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ccdc30Q8BVF4 654 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Eif3aP23116 1344 aaKnown RBP7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Mtus2Q3UHD3 1353 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Hoxa7P02830 229 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 1700010I14RikQ7TPG0 532 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Rcan3Q9JKK0 239 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 MecomP14404 1042 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ccdc18Q640L5 1455 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Gabpb2P81069 414 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ecm2Q5FW85 670 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Fmnl2A2APV2 1086 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ccdc73Q8CDM4 1066 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 KinQ8K339 391 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Inpp5dQ9ES52 1191 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Nek4Q9Z1J2 792 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Rock2P70336 1388 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Nf2P46662 596 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Tubb4bP68372 445 aaKnown RBP7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Bicd2Q921C5 820 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Cavin1O54724 392 aa7.31□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Sass6Q80UK7 654 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Tnnt1O88346 262 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ccdc112A0AUP1 442 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Syce3B5KM66 88 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ifit1bl1D3Z6F0 470 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Pde3bQ61409 1100 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ift57Q8BXG3 429 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ccdc60Q8C4J0 545 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 4933428M09RikQ9D3X3 192 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Gm10093D3YYI8 482 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Hdac1O09106 482 aaKnown RBP7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Atp6v1aP50516 617 aaKnown RBP7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Wdr63B2RY71 923 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Stag3O70576 1240 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Dnaaf4Q8R368 420 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Clul1Q3ZRW6 464 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Plekhh1Q80TI1 1356 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Serpina10Q8R121 448 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Cabp1Q9JLK7 227 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Dpf1Q9QX66 387 aa7.3□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Rbbp5Q8BX09 538 aaKnown RBP7.29□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Arhgap35Q91YM2 1499 aa7.29□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Mical1Q8VDP3 1048 aa7.29□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ccdc114Q3UX62 658 aa7.29□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Efcc1Q9JJF6 558 aa7.29□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Senp3Q9EP97 568 aaKnown RBP7.29□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Usp47Q8BY87 1376 aa7.29□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Tmco3Q8BH01 678 aa7.29□□□□□ -1.24
Ubr4-212ENSMUST00000165860 PdcQ9QW08 244 aa7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 SkilQ60665 675 aa7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Bms1Q6PGF5 1284 aaKnown RBP7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Smc2Q8CG48 1191 aaKnown RBP7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Brpf1B2RRD7 1212 aa7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Smc4Q8CG47 1286 aa7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Smc3Q9CW03 1217 aaKnown RBP7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 A0A0U1RNP2 1173 aa7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Synpo2Q91YE8 1087 aaKnown RBP7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Hap1O35668 628 aa7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Hvcn1Q3U2S8 269 aa7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Irx1P81068 480 aa7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ccdc70Q9D9B0 223 aa7.28□□□□□ -1.24
Ubr4-212ENSMUST00000165860 ImpactO55091 318 aa7.27□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ccdc102aQ3TMW1 549 aa7.27□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ggt6Q6PDE7 497 aa7.27□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Q7TT23 1179 aa7.27□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ccdc178Q8CDV0 866 aa7.27□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Mad1l1Q9WTX8 717 aaKnown RBP7.27□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Tex35Q14BK3 207 aa7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 G3bp1P97855 465 aaKnown RBP7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Rufy1Q8BIJ7 712 aa7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Smc5Q8CG46 1101 aaKnown RBP7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 SrrtQ99MR6 875 aaKnown RBP7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Nectin2P32507 530 aa7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Nkx1-2P42580 305 aa7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Cetn4Q8K4K1 168 aa7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Acbd3Q8BMP6 525 aa7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Gtf2e1Q9D0D5 440 aa7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Map4P27546 1125 aaKnown RBP7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Cog6Q8R3I3 657 aa7.27□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Ccdc152E9PX14 254 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Terf2O35144 541 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Sept6Q9R1T4 434 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Q9D2X8 372 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 MvpQ9EQK5 861 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Mcm6P97311 821 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Eif3j1Q3UGC7 261 aaKnown RBP7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Eif3j2Q66JS6 263 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Gcom1E9PZ54 550 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Gm42641I6L9G2 585 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 MyzapQ3UIJ9 466 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Tmed1Q3V009 227 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 AtripQ8BMG1 785 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Plin1Q8CGN5 517 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Grpel1Q99LP6 217 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Hook1Q8BIL5 728 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Usp48Q3V0C5 1052 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 4931400O07RikQ9D4M5 137 aa7.26□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Il4rP16382 810 aa7.25□□□□□ -1.25
Ubr4-212ENSMUST00000165860 Babam1Q3UI43 333 aa7.25□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms