RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 AppP12023 770 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Pde4cQ3UEI1 686 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Cc2d1aQ8K1A6 943 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Ppp2r3aB2RXC8 1150 aa12.87□□□□□ -0.35
Nup50-201ENSMUST00000165443 Gsdma3Q5Y4Y6 464 aa12.87□□□□□ -0.35
Nup50-201ENSMUST00000165443 Washc2Q6PGL7 1334 aa12.87□□□□□ -0.35
Nup50-201ENSMUST00000165443 Hook1Q8BIL5 728 aa12.87□□□□□ -0.35
Nup50-201ENSMUST00000165443 Gabpb2P81069 414 aa12.87□□□□□ -0.35
Nup50-201ENSMUST00000165443 Tpm4Q6IRU2 248 aa12.87□□□□□ -0.35
Nup50-201ENSMUST00000165443 NaspQ99MD9 773 aaKnown RBP12.87□□□□□ -0.35
Nup50-201ENSMUST00000165443 Cplx1P63040 134 aa12.86□□□□□ -0.35
Nup50-201ENSMUST00000165443 Puf60Q3UEB3 564 aaKnown RBP12.86□□□□□ -0.35
Nup50-201ENSMUST00000165443 Chmp7Q8R1T1 451 aa12.86□□□□□ -0.35
Nup50-201ENSMUST00000165443 TchhA0A0B4J1F9 1599 aa12.86□□□□□ -0.35
Nup50-201ENSMUST00000165443 Rab3gap2Q8BMG7 1366 aa12.86□□□□□ -0.35
Nup50-201ENSMUST00000165443 Pak3Q61036 559 aa12.86□□□□□ -0.35
Nup50-201ENSMUST00000165443 Rec8Q8C5S7 591 aa12.85□□□□□ -0.35
Nup50-201ENSMUST00000165443 Soga1E1U8D0 1418 aa12.85□□□□□ -0.35
Nup50-201ENSMUST00000165443 Zfp444Q3TDV8 331 aaKnown RBP12.85□□□□□ -0.35
Nup50-201ENSMUST00000165443 Nek4Q9Z1J2 792 aa12.85□□□□□ -0.35
Nup50-201ENSMUST00000165443 Erich3F6QRE9 1637 aa12.85□□□□□ -0.35
Nup50-201ENSMUST00000165443 Cavin4A2AMM0 362 aa12.84□□□□□ -0.35
Nup50-201ENSMUST00000165443 Ppp2r1aQ76MZ3 589 aa12.84□□□□□ -0.35
Nup50-201ENSMUST00000165443 Ubxn4Q8VCH8 506 aa12.84□□□□□ -0.35
Nup50-201ENSMUST00000165443 Ints3Q7TPD0 1041 aaKnown RBP12.84□□□□□ -0.35
Nup50-201ENSMUST00000165443 Gm21190A0A0G2JGJ6 266 aa12.84□□□□□ -0.35
Nup50-201ENSMUST00000165443 Zkscan2G3X952 960 aa12.84□□□□□ -0.35
Nup50-201ENSMUST00000165443 Myom3A2ABU4 1439 aa12.83□□□□□ -0.35
Nup50-201ENSMUST00000165443 Magi3Q9EQJ9 1476 aa12.83□□□□□ -0.35
Nup50-201ENSMUST00000165443 Q8BT18 775 aa12.83□□□□□ -0.36
Nup50-201ENSMUST00000165443 Cyp46a1Q9WVK8 500 aa12.83□□□□□ -0.36
Nup50-201ENSMUST00000165443 Gpatch3Q8BIY1 525 aa12.83□□□□□ -0.36
Nup50-201ENSMUST00000165443 Krt82Q99M74 516 aa12.83□□□□□ -0.36
Nup50-201ENSMUST00000165443 Psma5Q9Z2U1 241 aaKnown RBP12.83□□□□□ -0.36
Nup50-201ENSMUST00000165443 Ftsj3Q9DBE9 838 aaKnown RBP12.82□□□□□ -0.36
Nup50-201ENSMUST00000165443 Q8C5K5 320 aa12.82□□□□□ -0.36
Nup50-201ENSMUST00000165443 Mical1Q8VDP3 1048 aa12.82□□□□□ -0.36
Nup50-201ENSMUST00000165443 Polr3gQ6NXY9 223 aa12.81□□□□□ -0.36
Nup50-201ENSMUST00000165443 MlecQ6ZQI3 291 aaKnown RBP12.81□□□□□ -0.36
Nup50-201ENSMUST00000165443 Sv2bQ8BG39 683 aa12.81□□□□□ -0.36
Nup50-201ENSMUST00000165443 PdcQ9QW08 244 aa12.81□□□□□ -0.36
Nup50-201ENSMUST00000165443 Q7TT23 1179 aa12.81□□□□□ -0.36
Nup50-201ENSMUST00000165443 Kri1Q8VDQ9 704 aaKnown RBP12.81□□□□□ -0.36
Nup50-201ENSMUST00000165443 BccipQ9CWI3 316 aa12.81□□□□□ -0.36
Nup50-201ENSMUST00000165443 Gcc1Q9D4H2 778 aa12.81□□□□□ -0.36
Nup50-201ENSMUST00000165443 AnlnQ8K298 1121 aaKnown RBP12.8□□□□□ -0.36
Nup50-201ENSMUST00000165443 Cfdp1O88271 295 aaKnown RBP12.8□□□□□ -0.36
Nup50-201ENSMUST00000165443 PogkQ80TC5 607 aa12.8□□□□□ -0.36
Nup50-201ENSMUST00000165443 Nup160Q9Z0W3 1402 aaKnown RBP12.8□□□□□ -0.36
Nup50-201ENSMUST00000165443 Slx4Q6P1D7 1565 aa12.8□□□□□ -0.36
Nup50-201ENSMUST00000165443 Tnpo1Q8BFY9 898 aaKnown RBP12.8□□□□□ -0.36
Nup50-201ENSMUST00000165443 Cfap99A0A140LIX9 648 aa12.8□□□□□ -0.36
Nup50-201ENSMUST00000165443 Zrsr2Q62377 462 aaKnown RBP12.8□□□□□ -0.36
Nup50-201ENSMUST00000165443 Zkscan1Q8BGS3 561 aaKnown RBP12.8□□□□□ -0.36
Nup50-201ENSMUST00000165443 Hmox1P14901 289 aa12.79□□□□□ -0.36
Nup50-201ENSMUST00000165443 Fgd6Q69ZL1 1399 aa12.79□□□□□ -0.36
Nup50-201ENSMUST00000165443 Cd109Q8R422 1442 aa12.79□□□□□ -0.36
Nup50-201ENSMUST00000165443 Hap1O35668 628 aa12.79□□□□□ -0.36
Nup50-201ENSMUST00000165443 NexnQ7TPW1 607 aa12.79□□□□□ -0.36
Nup50-201ENSMUST00000165443 Phf14Q9D4H9 881 aa12.79□□□□□ -0.36
Nup50-201ENSMUST00000165443 Atp2b2Q9R0K7 1198 aa12.79□□□□□ -0.36
Nup50-201ENSMUST00000165443 Znhit6Q3UFB2 460 aaKnown RBP12.79□□□□□ -0.36
Nup50-201ENSMUST00000165443 Gpatch8A2A6A1 1505 aa12.79□□□□□ -0.36
Nup50-201ENSMUST00000165443 Dixdc1Q80Y83 711 aa12.78□□□□□ -0.36
Nup50-201ENSMUST00000165443 Rrp9Q91WM3 475 aaKnown RBP12.78□□□□□ -0.36
Nup50-201ENSMUST00000165443 Tomm22Q9CPQ3 142 aa12.78□□□□□ -0.36
Nup50-201ENSMUST00000165443 Dhx8A2A4P0 1244 aaKnown RBP12.78□□□□□ -0.36
Nup50-201ENSMUST00000165443 Tubb6Q922F4 447 aa12.78□□□□□ -0.36
Nup50-201ENSMUST00000165443 Zfp644E9QA22 1323 aa12.78□□□□□ -0.36
Nup50-201ENSMUST00000165443 Nectin2P32507 530 aa12.77□□□□□ -0.36
Nup50-201ENSMUST00000165443 CrcpO35427 148 aa12.77□□□□□ -0.36
Nup50-201ENSMUST00000165443 Fyb1O35601 819 aa12.77□□□□□ -0.37
Nup50-201ENSMUST00000165443 Arhgap31A6X8Z5 1425 aa12.77□□□□□ -0.37
Nup50-201ENSMUST00000165443 Fez1Q8K0X8 392 aa12.77□□□□□ -0.37
Nup50-201ENSMUST00000165443 Mad1l1Q9WTX8 717 aaKnown RBP12.77□□□□□ -0.37
Nup50-201ENSMUST00000165443 WizO88286 1684 aaKnown RBP12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 Gcom1E9PZ54 550 aa12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 MyzapQ3UIJ9 466 aa12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 Kif3cO35066 796 aa12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 Drc7Q6V3W6 876 aa12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 Necab1Q8BG18 352 aa12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 Wdr78E9PYY5 807 aa12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 Neurod6P48986 337 aa12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 Trim29Q8R2Q0 587 aa12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 Pbrm1Q8BSQ9 1634 aaKnown RBP12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 Anp32eP97822 260 aaKnown RBP12.76□□□□□ -0.37
Nup50-201ENSMUST00000165443 Gnl3lQ6PGG6 577 aaKnown RBP12.75□□□□□ -0.37
Nup50-201ENSMUST00000165443 UvssaQ9D479 717 aa12.75□□□□□ -0.37
Nup50-201ENSMUST00000165443 Chmp4cQ9D7F7 232 aa12.75□□□□□ -0.37
Nup50-201ENSMUST00000165443 Ttll5Q8CHB8 1328 aa12.75□□□□□ -0.37
Nup50-201ENSMUST00000165443 Il16O54824 1322 aa12.75□□□□□ -0.37
Nup50-201ENSMUST00000165443 Fam163aQ8CAA5 168 aa12.74□□□□□ -0.37
Nup50-201ENSMUST00000165443 HypkQ9CR41 129 aa12.74□□□□□ -0.37
Nup50-201ENSMUST00000165443 PxdnQ3UQ28 1475 aa12.74□□□□□ -0.37
Nup50-201ENSMUST00000165443 Odf2A3KGV1 830 aaKnown RBP12.74□□□□□ -0.37
Nup50-201ENSMUST00000165443 Vps53Q8CCB4 832 aa12.74□□□□□ -0.37
Nup50-201ENSMUST00000165443 Gm1043A0A140LJC2 1431 aa12.74□□□□□ -0.37
Nup50-201ENSMUST00000165443 Lmo7E9PYF4 1699 aaKnown RBP12.74□□□□□ -0.37
Nup50-201ENSMUST00000165443 Rnf214Q8BFU3 668 aaKnown RBP12.74□□□□□ -0.37
Nup50-201ENSMUST00000165443 OptnQ8K3K8 584 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 339.2 ms