RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Spag5Q7TME2 1165 aa11.1□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Map4P27546 1125 aaKnown RBP11.1□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Psma5Q9Z2U1 241 aaKnown RBP11.1□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Kif15Q6P9L6 1387 aa11.1□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Rnf187Q8BFX1 236 aa11.1□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Pkd2O35245 966 aa11.1□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Stim1P70302 685 aa11.1□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Erc2Q6PH08 957 aa11.1□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Pip4k2aO70172 405 aa11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Rab11fip3Q8CHD8 1047 aa11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Kif16bB1AVY7 1312 aa11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Dhx8A2A4P0 1244 aaKnown RBP11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Abl1P00520 1123 aa11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Nap1l2P51860 460 aa11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 TxlnaQ6PAM1 554 aaKnown RBP11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Larp1Q6ZQ58 1072 aaKnown RBP11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Nat10Q8K224 1024 aaKnown RBP11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Tsen2Q6P7W5 460 aa11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 4921504E06RikQ8CET2 560 aa11.09□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Lrrfip2Q91WK0 415 aa11.08□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Eif3aP23116 1344 aaKnown RBP11.08□□□□□ -0.64
Col6a5-201ENSMUST00000165165 SrrtQ99MR6 875 aaKnown RBP11.08□□□□□ -0.64
Col6a5-201ENSMUST00000165165 G3bp1P97855 465 aaKnown RBP11.08□□□□□ -0.64
Col6a5-201ENSMUST00000165165 IkQ9Z1M8 557 aaKnown RBP11.08□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Frmd3Q8BHD4 595 aa11.08□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Ift57Q8BXG3 429 aa11.08□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Dydc1Q9D9T0 175 aa11.08□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Skor1Q8BX46 964 aa11.07□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Cetn4Q8K4K1 168 aa11.07□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Pde1cQ64338 706 aa11.07□□□□□ -0.64
Col6a5-201ENSMUST00000165165 CenpqQ9CPQ5 267 aa11.06□□□□□ -0.64
Col6a5-201ENSMUST00000165165 MicalclQ9D5U9 680 aa11.06□□□□□ -0.64
Col6a5-201ENSMUST00000165165 CenpjQ569L8 1344 aa11.06□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Tango6Q8C3S2 1079 aa11.06□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Fez1Q8K0X8 392 aa11.06□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Sept7O55131 436 aa11.06□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Ddx46Q569Z5 1032 aaKnown RBP11.06□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Ppfibp2O35711 882 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 CastP51125 788 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 BcanQ61361 883 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Cfap58B2RW38 873 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 SlmapQ3URD3 845 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Rbm28Q8CGC6 750 aaKnown RBP11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Rad54l2Q99NG0 1466 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Sin3aQ60520 1274 aaKnown RBP11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Lamb3Q61087 1168 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Stard8Q8K031 1019 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 1700010I14RikQ7TPG0 532 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Pmfbp1Q9WVQ0 1022 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Triml2E9PW10 424 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 SltmQ8CH25 1031 aaKnown RBP11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Eva1cP58659 440 aa11.05□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Ccdc191J3QQ27 883 aa11.04□□□□□ -0.64
Col6a5-201ENSMUST00000165165 NexnQ7TPW1 607 aa11.04□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Tmc1Q8R4P5 757 aa11.04□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Ints3Q7TPD0 1041 aaKnown RBP11.04□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Gm42641I6L9G2 585 aa11.04□□□□□ -0.64
Col6a5-201ENSMUST00000165165 AtripQ8BMG1 785 aa11.04□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Kif27Q7M6Z4 1394 aa11.04□□□□□ -0.64
Col6a5-201ENSMUST00000165165 ClasrpQ8CFC7 668 aa11.04□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Odf2lQ9D478 642 aa11.04□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Pus7B7ZNL8 666 aaKnown RBP11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 TnmdQ9EP64 317 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Stk3Q9JI10 497 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Skor2A7M7C7 1008 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Sel1lQ9Z2G6 790 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Kdm5dQ62240 1548 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Srcin1Q9QWI6 1250 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Chmp7Q8R1T1 451 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Babam1Q3UI43 333 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Otud6bQ8K2H2 294 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Fyco1Q8VDC1 1437 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Gprasp1Q5U4C1 1347 aa11.03□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Cabp4Q8VHC5 271 aa11.02□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Sytl4Q9R0Q1 673 aa11.02□□□□□ -0.64
Col6a5-201ENSMUST00000165165 AnlnQ8K298 1121 aaKnown RBP11.02□□□□□ -0.64
Col6a5-201ENSMUST00000165165 Exoc8Q6PGF7 716 aa11.02□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Q9D2X8 372 aa11.02□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Prpf4bQ61136 1007 aaKnown RBP11.02□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Eif3j1Q3UGC7 261 aaKnown RBP11.02□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Eif3j2Q66JS6 263 aa11.02□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Psmd1Q3TXS7 953 aa11.01□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Trim25Q61510 634 aaKnown RBP11.01□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Arhgap35Q91YM2 1499 aa11.01□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Fmn1Q05860 1466 aa11.01□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Fbf1A2A870 1173 aa11.01□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Jakmip2D3YXK0 820 aa11.01□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Gigyf2Q6Y7W8 1291 aaKnown RBP11.01□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Rab3il1Q8VDV3 383 aa11.01□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Gm18336A0A140LIU8 765 aa11□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Adck5Q80V03 582 aa11□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Stk38Q91VJ4 465 aa11□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Trak1Q6PD31 939 aa11□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Paip2Q9D6V8 124 aa11□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Ercc6lQ8BHK9 1240 aa11□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Erlin1Q91X78 346 aa11□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Gtf2a1Q99PM3 378 aa11□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Agtpbp1Q641K1 1218 aa11□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Smc1aQ9CU62 1233 aaKnown RBP10.99□□□□□ -0.65
Col6a5-201ENSMUST00000165165 Tspyl3Q3UYP3 334 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 91.2 ms