RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Map3k5O35099 1380 aa14.53□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Apaf1O88879 1249 aa14.53□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Stk24Q99KH8 431 aa14.53□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Spag9Q58A65 1321 aaKnown RBP14.53□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Ppp2r3aB2RXC8 1150 aa14.52□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Il4rP16382 810 aa14.52□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Uspl1Q3ULM6 1089 aa14.52□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Trim58Q5NCC9 485 aa14.52□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Dhx30Q99PU8 1217 aaKnown RBP14.52□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Phf14Q9D4H9 881 aa14.52□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Abcc1O35379 1528 aa14.52□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Ksr2Q3UVC0 959 aa14.52□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Atf7ipQ7TT18 1306 aa14.52□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Kiaa1107Q80TK0 1369 aa14.52□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Catsper2A2ARP9 588 aa14.52□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Tnnt2P50752 301 aa14.52□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Paxip1Q6NZQ4 1056 aa14.52□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Vsig10D3YX43 558 aa14.51□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Irf5P56477 497 aa14.51□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Jph4Q80WT0 628 aa14.51□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Znf330Q922H9 316 aa14.51□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Caskin1Q6P9K8 1431 aa14.51□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Antxr1Q9CZ52 562 aa14.5□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Gtf2e1Q9D0D5 440 aa14.5□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Rrbp1Q99PL5 1605 aaKnown RBP14.5□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Fmn2Q9JL04 1578 aa14.5□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Kif20aP97329 887 aa14.5□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Plcb2A3KGF7 1181 aa14.5□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Ralbp1Q62172 648 aa14.5□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Usp40Q8BWR4 1235 aa14.5□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Ssh1Q76I79 1042 aa14.49□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Irx6Q9ER75 438 aa14.49□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Kiaa1211Q5PR69 1207 aa14.49□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Sbno1Q689Z5 1390 aa14.48□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Arhgap5P97393 1501 aa14.48□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Clasp1Q80TV8 1535 aaKnown RBP14.48□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Rabep1O35551 862 aa14.48□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Edc4Q3UJB9 1406 aaKnown RBP14.48□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Rfx1P48377 963 aa14.47□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Aplp1Q03157 653 aa14.47□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Tmc1Q8R4P5 757 aa14.47□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Znf521Q6KAS7 1311 aa14.47□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Senp3Q9EP97 568 aaKnown RBP14.47□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 P2rx7Q9Z1M0 595 aa14.47□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Mcm4P49717 862 aa14.47□□□□□ -0.09
Prpf40b-208ENSMUST00000136980 Rrp12Q6P5B0 1295 aaKnown RBP14.46□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Tulp4Q9JIL5 1547 aa14.46□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Arid4aF8VPQ2 1261 aaKnown RBP14.45□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Gm14025A2AP89 1413 aa14.45□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Adgrl2Q8JZZ7 1487 aa14.45□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Ylpm1Q9R0I7 1386 aaKnown RBP14.45□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Srpk2O54781 681 aaKnown RBP14.45□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Tbc1d32Q3URV1 1296 aa14.45□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Nsfl1cQ9CZ44 370 aaKnown RBP14.45□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Col17a1Q07563 1470 aa14.45□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Zmym3Q9JLM4 1370 aa14.45□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 AU019823E9PUQ3 292 aa14.44□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 SlkO54988 1233 aa14.44□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Nutm1Q8BHP2 1126 aa14.44□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 PogkQ80TC5 607 aa14.43□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 U2af1Q9D883 239 aaKnown RBP14.42□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 GsdmaQ9EST1 446 aa14.42□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Kif2cQ922S8 721 aa14.42□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Dmrtc1Q9D9R7 182 aa14.41□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Tmem132aQ922P8 1018 aa14.41□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Fam208aQ69ZR9 1610 aaKnown RBP14.41□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Terf2O35144 541 aa14.41□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Pabpn1Q8CCS6 302 aaKnown RBP14.41□□□□□ -0.1
Prpf40b-208ENSMUST00000136980 Cog6Q8R3I3 657 aa14.39□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Kif3bQ61771 747 aa14.39□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 GorabQ8BRM2 368 aa14.38□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Fancd2Q80V62 1450 aa14.38□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Tpm2P58774 284 aa14.38□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Zranb1Q7M760 708 aa14.37□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Ppip5k1A2ARP1 1436 aa14.37□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Tsen2Q6P7W5 460 aa14.37□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Skap1Q3UUV5 355 aa14.36□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Kif18aQ91WD7 886 aa14.36□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Abcc6Q9R1S7 1498 aa14.36□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Nectin2P32507 530 aa14.36□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Stk11ipQ3TAA7 1072 aa14.36□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Gtf3c6Q9D8P7 227 aa14.36□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Ythdc2B2RR83 1445 aaKnown RBP14.36□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 PtprtQ99M80 1454 aa14.35□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Cep170Q6A065 1588 aa14.35□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 NhsB1AV60 1647 aa14.35□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Ddit3P35639 168 aa14.35□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Map4k4P97820 1233 aaKnown RBP14.35□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Phlpp2Q8BXA7 1320 aa14.35□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Tfip11Q9ERA6 838 aaKnown RBP14.34□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Maco1Q7TQE6 664 aaKnown RBP14.34□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Fbxo2Q80UW2 297 aa14.34□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Ccar1Q8CH18 1146 aaKnown RBP14.34□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Stag3O70576 1240 aa14.33□□□□□ -0.11
Prpf40b-208ENSMUST00000136980 Dnajc14Q921R4 703 aa14.33□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 AI481877A2ALV5 1481 aa14.33□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Ccdc60Q8C4J0 545 aa14.33□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Mast1Q9R1L5 1570 aa14.32□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Tmco5bQ80X59 307 aa14.32□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Atl3Q91YH5 541 aa14.32□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 1703.3 ms