RNA–Protein interactions for RNA: ENSMUST00000111564.7

Clip1-204, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clip1, Length 5,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-204ENSMUST00000111564 Usp47Q8BY87 1376 aa13.27□□□□□ -0.29
Clip1-204ENSMUST00000111564 Gnl3lQ6PGG6 577 aaKnown RBP13.27□□□□□ -0.29
Clip1-204ENSMUST00000111564 NexnQ7TPW1 607 aa13.27□□□□□ -0.29
Clip1-204ENSMUST00000111564 Ccdc60Q8C4J0 545 aa13.27□□□□□ -0.29
Clip1-204ENSMUST00000111564 Kdm3bQ6ZPY7 1562 aa13.27□□□□□ -0.29
Clip1-204ENSMUST00000111564 Srek1Q8BZX4 494 aaKnown RBP13.26□□□□□ -0.29
Clip1-204ENSMUST00000111564 MsnP26041 577 aaKnown RBP13.26□□□□□ -0.29
Clip1-204ENSMUST00000111564 Tpm1P58771 284 aa13.26□□□□□ -0.29
Clip1-204ENSMUST00000111564 Rbm5Q91YE7 815 aaKnown RBP13.26□□□□□ -0.29
Clip1-204ENSMUST00000111564 BccipQ9CWI3 316 aa13.26□□□□□ -0.29
Clip1-204ENSMUST00000111564 Dnttip2Q8R2M2 758 aaKnown RBP13.25□□□□□ -0.29
Clip1-204ENSMUST00000111564 NhsB1AV60 1647 aa13.25□□□□□ -0.29
Clip1-204ENSMUST00000111564 TatQ8QZR1 454 aa13.25□□□□□ -0.29
Clip1-204ENSMUST00000111564 Adgrl3Q80TS3 1537 aa13.24□□□□□ -0.29
Clip1-204ENSMUST00000111564 Q8C5K5 320 aa13.24□□□□□ -0.29
Clip1-204ENSMUST00000111564 Kcnn1Q9EQR3 537 aa13.24□□□□□ -0.29
Clip1-204ENSMUST00000111564 Eif2s2Q99L45 331 aaKnown RBP13.24□□□□□ -0.29
Clip1-204ENSMUST00000111564 Ipo7Q9EPL8 1038 aaKnown RBP13.23□□□□□ -0.29
Clip1-204ENSMUST00000111564 Cfap74Q3UY96 1578 aa13.23□□□□□ -0.29
Clip1-204ENSMUST00000111564 A0A1L1SQF0 893 aa13.23□□□□□ -0.29
Clip1-204ENSMUST00000111564 GsdmaQ9EST1 446 aa13.23□□□□□ -0.29
Clip1-204ENSMUST00000111564 BcanQ61361 883 aa13.23□□□□□ -0.29
Clip1-204ENSMUST00000111564 Pank3Q8R2W9 370 aa13.23□□□□□ -0.29
Clip1-204ENSMUST00000111564 G3bp1P97855 465 aaKnown RBP13.23□□□□□ -0.29
Clip1-204ENSMUST00000111564 Cc2d1aQ8K1A6 943 aa13.23□□□□□ -0.29
Clip1-204ENSMUST00000111564 Klf15Q9EPW2 415 aa13.22□□□□□ -0.29
Clip1-204ENSMUST00000111564 Cyb5rlB1AS42 316 aa13.22□□□□□ -0.29
Clip1-204ENSMUST00000111564 SetQ9EQU5 289 aaKnown RBP13.22□□□□□ -0.29
Clip1-204ENSMUST00000111564 Lrrc9Q8CDN9 1456 aa13.22□□□□□ -0.29
Clip1-204ENSMUST00000111564 Ddx54Q8K4L0 874 aaKnown RBP13.22□□□□□ -0.29
Clip1-204ENSMUST00000111564 ErbinQ80TH2 1402 aa13.21□□□□□ -0.29
Clip1-204ENSMUST00000111564 Cspp1B2RX88 1205 aa13.21□□□□□ -0.29
Clip1-204ENSMUST00000111564 Pde4cQ3UEI1 686 aa13.21□□□□□ -0.29
Clip1-204ENSMUST00000111564 Fam208aQ69ZR9 1610 aaKnown RBP13.21□□□□□ -0.29
Clip1-204ENSMUST00000111564 Gm10471E9Q1C7 252 aa13.21□□□□□ -0.29
Clip1-204ENSMUST00000111564 Dhx9O70133 1380 aaKnown RBP13.21□□□□□ -0.29
Clip1-204ENSMUST00000111564 Nap1l3Q794H2 544 aa13.21□□□□□ -0.3
Clip1-204ENSMUST00000111564 Neurod6P48986 337 aa13.21□□□□□ -0.3
Clip1-204ENSMUST00000111564 Smg7Q5RJH6 1138 aaKnown RBP13.2□□□□□ -0.3
Clip1-204ENSMUST00000111564 Evi5lH3BKQ3 813 aa13.2□□□□□ -0.3
Clip1-204ENSMUST00000111564 Cplx1P63040 134 aa13.2□□□□□ -0.3
Clip1-204ENSMUST00000111564 Sf3a1Q8K4Z5 791 aaKnown RBP13.2□□□□□ -0.3
Clip1-204ENSMUST00000111564 SphkapQ6NSW3 1687 aa13.2□□□□□ -0.3
Clip1-204ENSMUST00000111564 Map7d2A2AG50 781 aa13.19□□□□□ -0.3
Clip1-204ENSMUST00000111564 March6Q6ZQ89 909 aa13.19□□□□□ -0.3
Clip1-204ENSMUST00000111564 Lrrcc1Q69ZB0 1026 aa13.19□□□□□ -0.3
Clip1-204ENSMUST00000111564 Gsto1O09131 240 aa13.19□□□□□ -0.3
Clip1-204ENSMUST00000111564 St18Q80TY4 1045 aa13.19□□□□□ -0.3
Clip1-204ENSMUST00000111564 Ppp4r3bQ922R5 820 aa13.19□□□□□ -0.3
Clip1-204ENSMUST00000111564 PhaxQ9JJT9 385 aaKnown RBP13.19□□□□□ -0.3
Clip1-204ENSMUST00000111564 Rnf17Q99MV7 1640 aa13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 Rnf20Q5DTM8 973 aa13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 Zranb3Q6NZP1 1069 aa13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 Ftsj3Q9DBE9 838 aaKnown RBP13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 PnisrA2AJT4 805 aaKnown RBP13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 Cul7Q8VE73 1689 aa13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 Gabpb2P81069 414 aa13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 Sugp2Q8CH09 1067 aa13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 Abca8bQ8K440 1620 aa13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 Dennd4bQ3U1Y4 1499 aa13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 Sytl4Q9R0Q1 673 aa13.18□□□□□ -0.3
Clip1-204ENSMUST00000111564 Ssh2Q5SW75 1423 aa13.17□□□□□ -0.3
Clip1-204ENSMUST00000111564 Filip1lQ6P6L0 1131 aa13.17□□□□□ -0.3
Clip1-204ENSMUST00000111564 Cd109Q8R422 1442 aa13.17□□□□□ -0.3
Clip1-204ENSMUST00000111564 Kif7B7ZNG0 1348 aa13.17□□□□□ -0.3
Clip1-204ENSMUST00000111564 Fam184bQ0KK56 942 aa13.17□□□□□ -0.3
Clip1-204ENSMUST00000111564 Fmn2Q9JL04 1578 aa13.17□□□□□ -0.3
Clip1-204ENSMUST00000111564 OvosQ3UU35 1456 aa13.17□□□□□ -0.3
Clip1-204ENSMUST00000111564 Kiaa1210E9Q0C6 1637 aa13.17□□□□□ -0.3
Clip1-204ENSMUST00000111564 Egfem1Q8C088 590 aa13.16□□□□□ -0.3
Clip1-204ENSMUST00000111564 Becn1O88597 448 aa13.16□□□□□ -0.3
Clip1-204ENSMUST00000111564 Sh3bgrQ9WUZ7 214 aa13.16□□□□□ -0.3
Clip1-204ENSMUST00000111564 Adgrl2Q8JZZ7 1487 aa13.15□□□□□ -0.3
Clip1-204ENSMUST00000111564 Kiaa0754Q69ZZ9 979 aa13.15□□□□□ -0.3
Clip1-204ENSMUST00000111564 Rec8Q8C5S7 591 aa13.15□□□□□ -0.3
Clip1-204ENSMUST00000111564 Inpp5dQ9ES52 1191 aa13.15□□□□□ -0.3
Clip1-204ENSMUST00000111564 Dmrt2Q8BG36 561 aa13.15□□□□□ -0.3
Clip1-204ENSMUST00000111564 AlkP97793 1621 aa13.14□□□□□ -0.31
Clip1-204ENSMUST00000111564 Triml2E9PW10 424 aa13.14□□□□□ -0.31
Clip1-204ENSMUST00000111564 Cfdp1O88271 295 aaKnown RBP13.14□□□□□ -0.31
Clip1-204ENSMUST00000111564 Trim29Q8R2Q0 587 aa13.14□□□□□ -0.31
Clip1-204ENSMUST00000111564 FanciQ8K368 1330 aa13.13□□□□□ -0.31
Clip1-204ENSMUST00000111564 Ylpm1Q9R0I7 1386 aaKnown RBP13.13□□□□□ -0.31
Clip1-204ENSMUST00000111564 Tnnt2P50752 301 aa13.13□□□□□ -0.31
Clip1-204ENSMUST00000111564 Hook1Q8BIL5 728 aa13.13□□□□□ -0.31
Clip1-204ENSMUST00000111564 Usp16Q99LG0 825 aa13.13□□□□□ -0.31
Clip1-204ENSMUST00000111564 Bcl2l13P59017 434 aa13.13□□□□□ -0.31
Clip1-204ENSMUST00000111564 Erc2Q6PH08 957 aa13.13□□□□□ -0.31
Clip1-204ENSMUST00000111564 Nsd2Q8BVE8 1365 aa13.13□□□□□ -0.31
Clip1-204ENSMUST00000111564 KinQ8K339 391 aa13.12□□□□□ -0.31
Clip1-204ENSMUST00000111564 Gm32742A0A1B0GT42 1604 aa13.12□□□□□ -0.31
Clip1-204ENSMUST00000111564 Gpatch11Q3UFS4 262 aa13.12□□□□□ -0.31
Clip1-204ENSMUST00000111564 Q9D9H8 365 aa13.12□□□□□ -0.31
Clip1-204ENSMUST00000111564 TefQ9JLC6 301 aa13.12□□□□□ -0.31
Clip1-204ENSMUST00000111564 Gnai1B2RSH2 354 aa13.11□□□□□ -0.31
Clip1-204ENSMUST00000111564 Ncbp3Q8BZR9 615 aaKnown RBP13.11□□□□□ -0.31
Clip1-204ENSMUST00000111564 Gnai3Q9DC51 354 aa13.11□□□□□ -0.31
Clip1-204ENSMUST00000111564 Cetn4Q8K4K1 168 aa13.11□□□□□ -0.31
Clip1-204ENSMUST00000111564 Arid4aF8VPQ2 1261 aaKnown RBP13.11□□□□□ -0.31
Clip1-204ENSMUST00000111564 MycnP03966 462 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms