RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Usp54Q8BL06 1588 aaKnown RBP9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Uspl1Q3ULM6 1089 aa9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Utp14aQ640M1 767 aaKnown RBP9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Kif1bQ60575 1816 aaKnown RBP9.52□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Map4k4P97820 1233 aaKnown RBP9.52□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Znf316Q6PGE4 1016 aa9.52□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Znf330Q922H9 316 aa9.52□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Pdcl3Q8BVF2 240 aa9.52□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Dnttip2Q8R2M2 758 aaKnown RBP9.51□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Rbm10Q99KG3 930 aaKnown RBP9.51□□□□□ -0.89
Bdnf-207ENSMUST00000111047 AnkarA2RT91 1465 aa9.51□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Ecm2Q5FW85 670 aa9.51□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Atxn3Q9CVD2 355 aa9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Slc52a2Q9D8F3 450 aa9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Abcc3B2RX12 1523 aa9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Ttc41Q692V3 1318 aa9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Kdm2bQ6P1G2 1309 aa9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Adamts13Q769J6 1426 aa9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Tmco5bQ80X59 307 aa9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 OvosQ3UU35 1456 aa9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Hecw1Q8K4P8 1604 aa9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 KarsQ99MN1 595 aaKnown RBP9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 TimelessQ9R1X4 1197 aa9.5□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Birc3O08863 600 aa9.49□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Ccdc60Q8C4J0 545 aa9.49□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Nphp4P59240 1425 aa9.49□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Mfap1aC0HKD8 439 aaKnown RBP9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Mfap1bC0HKD9 439 aaKnown RBP9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Atl3Q91YH5 541 aa9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Chmp4bQ9D8B3 224 aaKnown RBP9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 KnstrnQ9D9Z1 312 aaKnown RBP9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 AatkQ80YE4 1365 aa9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Gsto1O09131 240 aa9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Vgll3P85442 326 aa9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Pabpn1Q8CCS6 302 aaKnown RBP9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Ciz1Q8VEH2 845 aa9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Dusp27Q148W8 1138 aa9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Znf608Q56A10 1511 aa9.48□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Ppp2r3aB2RXC8 1150 aa9.47□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Pola1P33609 1465 aa9.47□□□□□ -0.89
Bdnf-207ENSMUST00000111047 G3bp1P97855 465 aaKnown RBP9.47□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Col17a1Q07563 1470 aa9.46□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Zcchc11B2RX14 1644 aaKnown RBP9.46□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Atp2b2Q9R0K7 1198 aa9.46□□□□□ -0.89
Bdnf-207ENSMUST00000111047 Q9D9H8 365 aa9.46□□□□□ -0.9
Bdnf-207ENSMUST00000111047 InsrP15208 1372 aa9.46□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Znf518aB2RRF6 1478 aaKnown RBP9.46□□□□□ -0.9
Bdnf-207ENSMUST00000111047 NhsB1AV60 1647 aa9.46□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Cavin4A2AMM0 362 aa9.46□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Nkx1-2P42580 305 aa9.46□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Usp19Q3UJD6 1360 aa9.46□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Gas2l2Q5SSG4 860 aa9.45□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Ppp1r18Q8BQ30 594 aa9.45□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Rbm25B2RY56 838 aaKnown RBP9.45□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Spryd3E9Q9B3 442 aa9.45□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Rsph4aQ8BYM7 716 aa9.45□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Gtf2a1Q99PM3 378 aa9.45□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Rabep1O35551 862 aa9.44□□□□□ -0.9
Bdnf-207ENSMUST00000111047 U2surpQ6NV83 1029 aaKnown RBP9.44□□□□□ -0.9
Bdnf-207ENSMUST00000111047 IbspQ61711 324 aa9.44□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Abca8bQ8K440 1620 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Plcb2A3KGF7 1181 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Plin1Q8CGN5 517 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Senp3Q9EP97 568 aaKnown RBP9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Cdc42bpbQ7TT50 1713 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Kiaa1210E9Q0C6 1637 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 IbtkQ6ZPR6 1352 aaKnown RBP9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Swt1Q9DBQ9 907 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 FanciQ8K368 1330 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Robo2Q7TPD3 1470 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 1700019A02RikA0A087WPV9 146 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Duxf3A0A0N4SV92 674 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Kiaa1107Q80TK0 1369 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Zmym3Q9JLM4 1370 aa9.43□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Nos1Q9Z0J4 1429 aa9.42□□□□□ -0.9
Bdnf-207ENSMUST00000111047 PalldQ9ET54 1408 aa9.42□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Zfp91Q62511 572 aa9.42□□□□□ -0.9
Bdnf-207ENSMUST00000111047 DekQ7TNV0 380 aaKnown RBP9.42□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Kdm5aQ3UXZ9 1690 aa9.42□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Ak9G3UYQ4 1894 aa9.42□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Gprasp1Q5U4C1 1347 aa9.42□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Myo3aQ8K3H5 1613 aa9.42□□□□□ -0.9
Bdnf-207ENSMUST00000111047 ShprhQ7TPQ3 1674 aa9.42□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Ccdc171E9Q1U1 1324 aa9.42□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Cdk19Q8BWD8 501 aa9.41□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Ppp1r9bQ6R891 817 aaKnown RBP9.41□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Tnpo1Q8BFY9 898 aaKnown RBP9.41□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Gli2Q0VGT2 1544 aa9.41□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Psme1P97371 249 aa9.41□□□□□ -0.9
Bdnf-207ENSMUST00000111047 HnrnpuQ8VEK3 800 aaKnown RBP9.41□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Skint5A7XUY5 1461 aa9.41□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Txndc2Q6P902 515 aa9.4□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Zranb1Q7M760 708 aa9.4□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Nutm1Q8BHP2 1126 aa9.4□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Nectin2P32507 530 aa9.4□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Tmc1Q8R4P5 757 aa9.4□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Lrrc7Q80TE7 1490 aa9.4□□□□□ -0.9
Bdnf-207ENSMUST00000111047 Uggt2E9Q4X2 1504 aa9.4□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Pdcd11Q6NS46 1862 aaKnown RBP9.39□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Sptbn5F6UCX4 1208 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms