RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Map7O88735 730 aa16.92■□□□□ 0.3
Clcn3-204ENSMUST00000110301 Cavin4A2AMM0 362 aa16.92■□□□□ 0.3
Clcn3-204ENSMUST00000110301 Cc2d1aQ8K1A6 943 aa16.91■□□□□ 0.3
Clcn3-204ENSMUST00000110301 Cabp2Q9JLK4 216 aa16.91■□□□□ 0.3
Clcn3-204ENSMUST00000110301 Dennd6aQ8BH65 605 aa16.91■□□□□ 0.3
Clcn3-204ENSMUST00000110301 Trim58Q5NCC9 485 aa16.9■□□□□ 0.3
Clcn3-204ENSMUST00000110301 Bcl11bQ99PV8 884 aa16.9■□□□□ 0.3
Clcn3-204ENSMUST00000110301 Atxn3Q9CVD2 355 aa16.9■□□□□ 0.3
Clcn3-204ENSMUST00000110301 Naip6Q9JIB6 1403 aa16.9■□□□□ 0.3
Clcn3-204ENSMUST00000110301 Cep170Q6A065 1588 aa16.89■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Supt6hQ62383 1726 aaKnown RBP16.89■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Cdc42bpaQ3UU96 1719 aa16.89■□□□□ 0.29
Clcn3-204ENSMUST00000110301 HnrnpuQ8VEK3 800 aaKnown RBP16.89■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Prrc2bQ7TPM1 1486 aaKnown RBP16.88■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.88■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Vsig10D3YX43 558 aa16.88■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Depdc5P61460 1591 aa16.88■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Gnai1B2RSH2 354 aa16.87■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Gnai3Q9DC51 354 aa16.87■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Plekhh1Q80TI1 1356 aa16.86■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Gm10471E9Q1C7 252 aa16.86■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Slc12a5Q91V14 1138 aa16.86■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Q8BT18 775 aa16.86■□□□□ 0.29
Clcn3-204ENSMUST00000110301 KnstrnQ9D9Z1 312 aaKnown RBP16.86■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Mast1Q9R1L5 1570 aa16.85■□□□□ 0.29
Clcn3-204ENSMUST00000110301 NpatQ8BMA5 1420 aa16.85■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Ppm1gQ61074 542 aa16.85■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Yeats2Q3TUF7 1407 aa16.85■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Hsp90b1P08113 802 aaKnown RBP16.85■□□□□ 0.29
Clcn3-204ENSMUST00000110301 IbtkQ6ZPR6 1352 aaKnown RBP16.85■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Ciz1Q8VEH2 845 aa16.84■□□□□ 0.29
Clcn3-204ENSMUST00000110301 GnpatP98192 678 aa16.84■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Bcl2l13P59017 434 aa16.83■□□□□ 0.29
Clcn3-204ENSMUST00000110301 Sart3Q9JLI8 962 aaKnown RBP16.83■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Cfap65Q3V0B4 1847 aa16.82■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Tmem94Q7TSH8 1360 aa16.82■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Ccdc146E9Q9F7 977 aa16.82■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Usp54Q8BL06 1588 aaKnown RBP16.82■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Ggnbp2Q5SV77 696 aa16.82■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Zranb3Q6NZP1 1069 aa16.82■□□□□ 0.28
Clcn3-204ENSMUST00000110301 DekQ7TNV0 380 aaKnown RBP16.82■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Ric3Q8BPM6 367 aa16.82■□□□□ 0.28
Clcn3-204ENSMUST00000110301 NinlQ6ZQ12 1394 aa16.82■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Mfap1aC0HKD8 439 aaKnown RBP16.81■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Mfap1bC0HKD9 439 aaKnown RBP16.81■□□□□ 0.28
Clcn3-204ENSMUST00000110301 AU022751B1B0V2 589 aa16.81■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Sirt1Q923E4 737 aa16.81■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Setd1bQ8CFT2 1985 aa16.81■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Mcm10Q0VBD2 885 aa16.81■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Chmp7Q8R1T1 451 aa16.81■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Idi2Q8BFZ6 227 aa16.8■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Triml2E9PW10 424 aa16.8■□□□□ 0.28
Clcn3-204ENSMUST00000110301 GorabQ8BRM2 368 aa16.8■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Prkrip1Q9CWV6 186 aaKnown RBP16.79■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Talpid3E9PV87 1520 aa16.79■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Hfm1D3Z4R1 1434 aa16.79■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Tarbp1E9Q368 1579 aa16.79■□□□□ 0.28
Clcn3-204ENSMUST00000110301 HypkQ9CR41 129 aa16.79■□□□□ 0.28
Clcn3-204ENSMUST00000110301 ChgaP26339 463 aaKnown RBP16.78■□□□□ 0.28
Clcn3-204ENSMUST00000110301 TimelessQ9R1X4 1197 aa16.78■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Synj2Q9D2G5 1434 aa16.77■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Gm21698A0A087WQP8 267 aa16.77■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Fmnl2A2APV2 1086 aa16.77■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Gm21671G3UY31 267 aa16.77■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Cyb5rlB1AS42 316 aa16.77■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Gsdma3Q5Y4Y6 464 aa16.77■□□□□ 0.28
Clcn3-204ENSMUST00000110301 TmpoQ61033 693 aaKnown RBP16.77■□□□□ 0.28
Clcn3-204ENSMUST00000110301 Ubap1lG3UW59 384 aa16.77■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Slc4a10Q5DTL9 1118 aa16.76■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Kif1bQ60575 1816 aaKnown RBP16.76■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Ccne1Q61457 408 aa16.76■□□□□ 0.27
Clcn3-204ENSMUST00000110301 InsrP15208 1372 aa16.76■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Ipo8Q7TMY7 1010 aa16.75■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Rab11fip3Q8CHD8 1047 aa16.75■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Ddx54Q8K4L0 874 aaKnown RBP16.75■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Ppp1r15aP17564 657 aa16.74■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Map4k4P97820 1233 aaKnown RBP16.74■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Gimap6Q8K349 305 aa16.74■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Ppip5k1A2ARP1 1436 aa16.74■□□□□ 0.27
Clcn3-204ENSMUST00000110301 TnikP83510 1323 aa16.74■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Tspyl2Q7TQI8 677 aa16.74■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Sv2bQ8BG39 683 aa16.74■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Dnai1Q8C0M8 701 aa16.73■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Lrrc7Q80TE7 1490 aa16.73■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Fchsd2Q3USJ8 740 aa16.73■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Ttll13A4Q9F6 804 aa16.72■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Cdc37l1Q9CZP7 335 aa16.72■□□□□ 0.27
Clcn3-204ENSMUST00000110301 PalldQ9ET54 1408 aa16.72■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Nos1Q9Z0J4 1429 aa16.72■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Ythdc1E9Q5K9 736 aaKnown RBP16.72■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Skint5A7XUY5 1461 aa16.71■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Rnf17Q99MV7 1640 aa16.71■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Fkbp4P30416 458 aa16.71■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Ccdc27Q3V036 639 aa16.71■□□□□ 0.27
Clcn3-204ENSMUST00000110301 Efcab6Q6P1E8 1516 aa16.71■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Uspl1Q3ULM6 1089 aa16.7■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Eif4g2Q62448 906 aaKnown RBP16.7■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Chmp3Q9CQ10 224 aa16.7■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Naip7Q9JIB3 1402 aa16.7■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Tmem132eQ6IEE6 982 aa16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms