RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 PtprgQ05909 1442 aa17.85■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 CrbnQ8C7D2 445 aa17.85■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Topaz1E5FYH1 1653 aa17.85■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Sbno1Q689Z5 1390 aa17.84■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Dip2aQ8BWT5 1523 aa17.84■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Sptbn5F6UCX4 1208 aa17.84■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Antxr1Q9CZ52 562 aa17.84■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Inpp5dQ9ES52 1191 aa17.84■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Abca17E9PX95 1733 aa17.83■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Med14A2ABV5 1459 aaKnown RBP17.82■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Tmf1B9EKI3 1091 aa17.82■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Ppp2r1aQ76MZ3 589 aa17.81■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Spag9Q58A65 1321 aaKnown RBP17.81■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Map4P27546 1125 aaKnown RBP17.8■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Rab3gap2Q8BMG7 1366 aa17.8■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Gm6268A2A3U9 297 aa17.79■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Znf521Q6KAS7 1311 aa17.79■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Fbxo41Q6NS60 873 aa17.79■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Rtn4Q99P72 1162 aaKnown RBP17.79■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Arhgap23Q69ZH9 1483 aa17.78■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Scn4aQ9ER60 1841 aa17.77■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 4930567H17RikQ3V0K5 233 aa17.77■□□□□ 0.44
Hoxc4-201ENSMUST00000100164 Ppip5k1A2ARP1 1436 aa17.76■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Rabep1O35551 862 aa17.76■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Ccdc30Q8BVF4 654 aa17.76■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Rrp12Q6P5B0 1295 aaKnown RBP17.75■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Gm16486A0A1D5RMD1 1434 aa17.75■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Isy1Q69ZQ2 285 aaKnown RBP17.75■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Apbb1Q9QXJ1 710 aa17.75■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Tspyl2Q7TQI8 677 aa17.74■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 GphnQ8BUV3 769 aaKnown RBP17.74■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Speer4f1Q9D5Q6 258 aa17.74■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Usp54Q8BL06 1588 aaKnown RBP17.74■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Mcm4P49717 862 aa17.73■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Tbc1d32Q3URV1 1296 aa17.73■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Ppp2r3aB2RXC8 1150 aa17.73■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Znf692Q3U381 531 aa17.73■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Paxip1Q6NZQ4 1056 aa17.72■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Usp19Q3UJD6 1360 aa17.72■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Abcc6Q9R1S7 1498 aa17.72■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Ssh2Q5SW75 1423 aa17.72■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Tnpo1Q8BFY9 898 aaKnown RBP17.71■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Clstn2Q9ER65 966 aa17.71■□□□□ 0.43
Hoxc4-201ENSMUST00000100164 Hfm1D3Z4R1 1434 aa17.7■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 NgefQ8CHT1 710 aa17.7■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Adamts7Q68SA9 1657 aa17.69■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Myo5cE9Q1F5 1742 aa17.69■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Trim58Q5NCC9 485 aa17.68■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Ralbp1Q62172 648 aa17.68■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Tex2Q6ZPJ0 1128 aaKnown RBP17.68■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Adamts13Q769J6 1426 aa17.68■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 CatipB9EKE5 520 aa17.66■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 ShprhQ7TPQ3 1674 aa17.66■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Ylpm1Q9R0I7 1386 aaKnown RBP17.66■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Rimbp3Q3V0F0 1606 aa17.66■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Spryd3E9Q9B3 442 aa17.66■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Fam184bQ0KK56 942 aa17.66■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Rlbp1Q9Z275 317 aa17.66■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Atp7aQ64430 1491 aa17.66■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Ltbp4Q8K4G1 1666 aa17.66■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Pola1P33609 1465 aa17.65■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Il4rP16382 810 aa17.65■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Tpm2P58774 284 aa17.65■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Zbtb7cQ8VCZ7 619 aa17.65■□□□□ 0.42
Hoxc4-201ENSMUST00000100164 Duxf3A0A0N4SV92 674 aa17.64■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Zfp777B9EKF4 885 aa17.64■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Taok2Q6ZQ29 1240 aa17.64■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Ssh1Q76I79 1042 aa17.64■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Pip4k2bQ80XI4 416 aa17.64■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Atl3Q91YH5 541 aa17.64■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Phlpp1Q8CHE4 1687 aa17.64■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Fam135bQ9DAI6 1403 aa17.64■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Clcn1Q64347 994 aa17.64■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 PogkQ80TC5 607 aa17.64■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Kif1bQ60575 1816 aaKnown RBP17.63■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 KarsQ99MN1 595 aaKnown RBP17.63■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Cd109Q8R422 1442 aa17.63■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Prex1Q69ZK0 1650 aa17.63■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Slc4a1apE9PX68 744 aa17.62■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Ddrgk1Q80WW9 315 aa17.62■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Pank1Q8K4K6 548 aa17.62■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Ifit1bl1D3Z6F0 470 aa17.62■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Zbtb4Q5F293 982 aa17.62■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Pde4cQ3UEI1 686 aa17.61■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Uspl1Q3ULM6 1089 aa17.61■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Neurod2Q62414 383 aa17.61■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Catsper2A2ARP9 588 aa17.6■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Terf2O35144 541 aa17.6■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 AnkarA2RT91 1465 aa17.59■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Phlpp2Q8BXA7 1320 aa17.59■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Golga2Q921M4 999 aa17.59■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 ArxO35085 564 aa17.59■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Kdm5aQ3UXZ9 1690 aa17.58■□□□□ 0.41
Hoxc4-201ENSMUST00000100164 Robo2Q7TPD3 1470 aa17.58■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Itsn2Q9Z0R6 1659 aa17.57■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Scaf11E9PZM7 1456 aaKnown RBP17.57■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Dusp27Q148W8 1138 aa17.57■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Nom1Q3UFM5 854 aaKnown RBP17.57■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Rims2Q9EQZ7 1530 aa17.56■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Trim44Q9QXA7 346 aa17.56■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 78.5 ms