RNA–Protein interactions for RNA: ENSMUST00000096386.12

Rnf41-201, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-201ENSMUST00000096386 Ccdc30Q8BVF4 654 aa13.44□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Grpel1Q99LP6 217 aa13.44□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Dhx9O70133 1380 aaKnown RBP13.44□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Grwd1Q810D6 446 aaKnown RBP13.43□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Phlpp2Q8BXA7 1320 aa13.43□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Kdm5cP41230 1554 aa13.43□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Pnmal2G3X9N3 661 aa13.42□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Kif3aP28741 701 aa13.42□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Ercc6lQ8BHK9 1240 aa13.42□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Gtpbp4Q99ME9 634 aaKnown RBP13.42□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Znf608Q56A10 1511 aa13.41□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Cald1E9QA15 768 aaKnown RBP13.41□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Atp10dQ8K2X1 1416 aa13.41□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Atl3Q91YH5 541 aa13.41□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Gm45140A0A0N4SUM8 220 aa13.4□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Bms1Q6PGF5 1284 aaKnown RBP13.4□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Trim58Q5NCC9 485 aa13.4□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Neurod2Q62414 383 aa13.4□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Zfp251Q6PCX8 632 aa13.39□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Cpsf1Q9EPU4 1441 aaKnown RBP13.39□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Setd1aE9PYH6 1716 aa13.39□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Inpp5dQ9ES52 1191 aa13.38□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Rrbp1Q99PL5 1605 aaKnown RBP13.38□□□□□ -0.27
Rnf41-201ENSMUST00000096386 AcrbpQ3V140 540 aa13.38□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Chmp4cQ9D7F7 232 aa13.38□□□□□ -0.27
Rnf41-201ENSMUST00000096386 PrxO55103 1391 aa13.38□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Magi1Q6RHR9 1471 aa13.38□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Rbm25B2RY56 838 aaKnown RBP13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Ncoa3O09000 1398 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Gm10093D3YYI8 482 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Hdac1O09106 482 aaKnown RBP13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Bag4Q8CI61 457 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Ube2q2Q8K2Z8 378 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Wdr7Q920I9 1489 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Asxl1P59598 1514 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Atf7ipQ7TT18 1306 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Ncapd2Q8K2Z4 1392 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Fam163aQ8CAA5 168 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 4931400O07RikQ9D4M5 137 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Rapgef6Q5NCJ1 1609 aa13.37□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Zscan25B2RX31 543 aa13.36□□□□□ -0.27
Rnf41-201ENSMUST00000096386 ImpactO55091 318 aa13.36□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Abcc5Q9R1X5 1436 aa13.36□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Kcnj4P52189 445 aa13.36□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Zscan10Q3URR7 782 aa13.36□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Ppp2r1aQ76MZ3 589 aa13.35□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Ncbp1Q3UYV9 790 aaKnown RBP13.35□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Rcan3Q9JKK0 239 aa13.35□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Lrrc9Q8CDN9 1456 aa13.35□□□□□ -0.27
Rnf41-201ENSMUST00000096386 DroshaQ5HZJ0 1373 aaKnown RBP13.35□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Inpp5bQ8K337 993 aa13.35□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Bloc1s4Q8VED2 215 aa13.35□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Fancd2Q80V62 1450 aa13.35□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Plekhh2Q8C115 1491 aa13.35□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Map7O88735 730 aa13.34□□□□□ -0.27
Rnf41-201ENSMUST00000096386 BbxQ8VBW5 907 aa13.34□□□□□ -0.27
Rnf41-201ENSMUST00000096386 NexmifQ5DTT1 1515 aa13.34□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Polr3aB2RXC6 1390 aa13.34□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Prdm4Q80V63 803 aa13.34□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Rsph4aQ8BYM7 716 aa13.34□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Fbxo3Q9DC63 480 aa13.34□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Tbc1d31Q6NXY1 996 aa13.33□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Mrvi1Q9WUX5 899 aaKnown RBP13.33□□□□□ -0.27
Rnf41-201ENSMUST00000096386 Usp19Q3UJD6 1360 aa13.33□□□□□ -0.28
Rnf41-201ENSMUST00000096386 AlkP97793 1621 aa13.33□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Sh3bp1P55194 680 aa13.33□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Anp32cQ64G17 123 aa13.33□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Tarbp1E9Q368 1579 aa13.33□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Dmrtc1Q9D9R7 182 aa13.33□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Ptgs1P22437 602 aa13.32□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Kdm4cQ8VCD7 1054 aa13.32□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Glipr1l2Q9CQ35 332 aa13.32□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Arhgap4B1AUY3 965 aa13.32□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Nfatc2ipO09130 412 aa13.32□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Rab3gap2Q8BMG7 1366 aa13.32□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Fam135bQ9DAI6 1403 aa13.31□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Dync1i1O88485 628 aa13.3□□□□□ -0.28
Rnf41-201ENSMUST00000096386 U2af2P26369 475 aaKnown RBP13.3□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Kdm4aQ8BW72 1064 aa13.3□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Irx4Q9QY61 515 aa13.3□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Supt6hQ62383 1726 aaKnown RBP13.3□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Prex2Q3LAC4 1598 aa13.3□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Gm9992B2RWK3 458 aa13.3□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Gas2l2Q5SSG4 860 aa13.3□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Unc93aQ710D3 458 aa13.3□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Rbm42Q91V81 474 aaKnown RBP13.3□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Depdc5P61460 1591 aa13.29□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Mroh2aD3Z750 1679 aa13.29□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Iqgap1Q9JKF1 1657 aaKnown RBP13.29□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Tmf1B9EKI3 1091 aa13.29□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Casq1O09165 405 aa13.29□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Trak1Q6PD31 939 aa13.29□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Cluap1Q8R3P7 413 aa13.29□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Il16O54824 1322 aa13.29□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Ralbp1Q62172 648 aa13.28□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Ttll5Q8CHB8 1328 aa13.28□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Cavin1O54724 392 aa13.28□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Rbm27Q5SFM8 1060 aaKnown RBP13.28□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Fez2Q6TYB5 348 aa13.28□□□□□ -0.28
Rnf41-201ENSMUST00000096386 Rasa1E9PYG6 1038 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms