RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Kif21bQ9QXL1 1668 aa13.31□□□□□ -0.28
Ldb3-205ENSMUST00000090040 AglF8VPN4 1532 aa13.31□□□□□ -0.28
Ldb3-205ENSMUST00000090040 DaxxO35613 739 aa13.3□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Zfp444Q3TDV8 331 aaKnown RBP13.3□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Clasp1Q80TV8 1535 aaKnown RBP13.3□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Tcerg1Q8CGF7 1100 aaKnown RBP13.3□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Pprc1Q6NZN1 1644 aa13.29□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Kidins220E9Q9B7 1793 aa13.29□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Cdc42bpbQ7TT50 1713 aa13.28□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Idi2Q8BFZ6 227 aa13.28□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Atf3Q60765 181 aa13.28□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Plekhh1Q80TI1 1356 aa13.27□□□□□ -0.28
Ldb3-205ENSMUST00000090040 Swt1Q9DBQ9 907 aa13.27□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Tulp4Q9JIL5 1547 aa13.27□□□□□ -0.29
Ldb3-205ENSMUST00000090040 CatipB9EKE5 520 aa13.27□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Cdc42bpgQ80UW5 1551 aa13.26□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Tmco5bQ80X59 307 aa13.26□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Cavin4A2AMM0 362 aa13.26□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Dip2cE9PWR4 1557 aa13.26□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Ecm2Q5FW85 670 aa13.25□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Trim30dE9PWL0 497 aa13.25□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Q3TQI7 289 aaKnown RBP13.25□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Fchsd2Q3USJ8 740 aa13.25□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Map4k4P97820 1233 aaKnown RBP13.24□□□□□ -0.29
Ldb3-205ENSMUST00000090040 AampJ3QN89 436 aa13.24□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Gimap6Q8K349 305 aa13.24□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Supt16hQ920B9 1047 aa13.24□□□□□ -0.29
Ldb3-205ENSMUST00000090040 HnrnpuQ8VEK3 800 aaKnown RBP13.24□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Pola1P33609 1465 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Abca9Q8K449 1623 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Map7O88735 730 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 ShprhQ7TPQ3 1674 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Dennd6aQ8BH65 605 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Myom2Q14BI5 1463 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Kiaa0556Q8C753 1610 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Gnai1B2RSH2 354 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Pip4k2bQ80XI4 416 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Gnai3Q9DC51 354 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Fndc1E9Q043 1732 aa13.23□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Gsdma3Q5Y4Y6 464 aa13.22□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Atf7ipQ7TT18 1306 aa13.22□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Abca6Q8K441 1624 aa13.22□□□□□ -0.29
Ldb3-205ENSMUST00000090040 AU022751B1B0V2 589 aa13.22□□□□□ -0.29
Ldb3-205ENSMUST00000090040 DiexfQ8BTT6 772 aaKnown RBP13.22□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Ccdc60Q8C4J0 545 aa13.22□□□□□ -0.29
Ldb3-205ENSMUST00000090040 TatQ8QZR1 454 aa13.22□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Chmp5Q9D7S9 219 aa13.22□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Gm10563F6WIE4 79 aa13.21□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Apaf1O88879 1249 aa13.21□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Evi5lH3BKQ3 813 aa13.21□□□□□ -0.29
Ldb3-205ENSMUST00000090040 Ppp1r15aP17564 657 aa13.21□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Trim58Q5NCC9 485 aa13.21□□□□□ -0.3
Ldb3-205ENSMUST00000090040 G3bp1P97855 465 aaKnown RBP13.2□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Col17a1Q07563 1470 aa13.2□□□□□ -0.3
Ldb3-205ENSMUST00000090040 PzpQ61838 1495 aa13.2□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Slc4a3P16283 1227 aa13.2□□□□□ -0.3
Ldb3-205ENSMUST00000090040 EspnQ9ET47 871 aa13.2□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Pdcd11Q6NS46 1862 aaKnown RBP13.19□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Hecw2Q6I6G8 1578 aa13.19□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Zmym4A2A791 1549 aaKnown RBP13.19□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Dbr1Q923B1 550 aa13.19□□□□□ -0.3
Ldb3-205ENSMUST00000090040 RereQ80TZ9 1558 aa13.19□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Gm16486A0A1D5RMD1 1434 aa13.18□□□□□ -0.3
Ldb3-205ENSMUST00000090040 NinlQ6ZQ12 1394 aa13.18□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Hoxb7P09024 217 aa13.18□□□□□ -0.3
Ldb3-205ENSMUST00000090040 B4galnt3Q6L8S8 986 aa13.18□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Naip7Q9JIB3 1402 aa13.18□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Uggt1Q6P5E4 1551 aa13.18□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Rbm25B2RY56 838 aaKnown RBP13.18□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Armcx1Q9CX83 456 aa13.18□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Knl1Q66JQ7 1612 aa13.18□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Znf330Q922H9 316 aa13.18□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Myo3aQ8K3H5 1613 aa13.17□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Cep152A2AUM9 1736 aaKnown RBP13.17□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Asxl2Q8BZ32 1370 aa13.17□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Plekhg1F6S200 1446 aa13.17□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Hsp90ab1P11499 724 aaKnown RBP13.17□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Dusp27Q148W8 1138 aa13.17□□□□□ -0.3
Ldb3-205ENSMUST00000090040 PalmQ9Z0P4 383 aa13.17□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Ccdc171E9Q1U1 1324 aa13.17□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Fmnl2A2APV2 1086 aa13.17□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Robo2Q7TPD3 1470 aa13.16□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Rims1Q99NE5 1463 aa13.16□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Plxnc1Q9QZC2 1574 aa13.16□□□□□ -0.3
Ldb3-205ENSMUST00000090040 KnstrnQ9D9Z1 312 aaKnown RBP13.16□□□□□ -0.3
Ldb3-205ENSMUST00000090040 HypkQ9CR41 129 aa13.15□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Adgrb3Q80ZF8 1522 aa13.15□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Pibf1E9Q6K3 756 aa13.15□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Prkrip1Q9CWV6 186 aaKnown RBP13.15□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Usp16Q99LG0 825 aa13.15□□□□□ -0.3
Ldb3-205ENSMUST00000090040 Iqgap3F8VQ29 1632 aa13.14□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Zranb1Q7M760 708 aa13.14□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Sart3Q9JLI8 962 aaKnown RBP13.14□□□□□ -0.31
Ldb3-205ENSMUST00000090040 ArxO35085 564 aa13.14□□□□□ -0.31
Ldb3-205ENSMUST00000090040 MpripP97434 1024 aa13.14□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Topbp1Q6ZQF0 1515 aa13.14□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Pak3Q61036 559 aa13.14□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Tnnt1O88346 262 aa13.13□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Senp3Q9EP97 568 aaKnown RBP13.13□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Ttc37F8VPK0 1563 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms