RNA–Protein interactions for RNA: ENSMUST00000088653.2

Ccdc87-201, Transcript of Coiled-coil domain-containing protein 87, mousemouse

APPRIS P1 BASIC

Gene Ccdc87, Length 3,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87-201ENSMUST00000088653 Dcaf11Q91VU6 549 aa13.79□□□□□ -0.2
Ccdc87-201ENSMUST00000088653 Anp32aO35381 247 aa13.78□□□□□ -0.2
Ccdc87-201ENSMUST00000088653 Erbb3Q61526 1339 aa13.78□□□□□ -0.2
Ccdc87-201ENSMUST00000088653 Cep170bQ80U49 1574 aa13.77□□□□□ -0.2
Ccdc87-201ENSMUST00000088653 Nrxn1Q9CS84 1514 aa13.77□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 PplQ9R269 1755 aa13.76□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Esx1O88933 382 aa13.76□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Upf2A2AT37 1269 aaKnown RBP13.75□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Ttc41Q692V3 1318 aa13.75□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Abca14E9Q8F8 1683 aa13.75□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Ercc6l2Q9JIM3 1537 aa13.75□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Plekhg1F6S200 1446 aa13.75□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Shq1Q7TMX5 569 aa13.75□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Adamtsl3G3UXC7 1706 aa13.74□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Med14A2ABV5 1459 aaKnown RBP13.74□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Cnga1P29974 684 aa13.73□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Scaf11E9PZM7 1456 aaKnown RBP13.73□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Kif16bB1AVY7 1312 aa13.73□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Usp19Q3UJD6 1360 aa13.72□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Dip2aQ8BWT5 1523 aa13.72□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Wdr43Q6ZQL4 677 aaKnown RBP13.71□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Nlrp6Q91WS2 869 aa13.71□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Adgrl1Q80TR1 1466 aa13.71□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Kiaa1107Q80TK0 1369 aa13.71□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 Mink1Q9JM52 1308 aa13.71□□□□□ -0.21
Ccdc87-201ENSMUST00000088653 NktrP30415 1453 aa13.71□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Chd2E9PZM4 1827 aaKnown RBP13.71□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Rad21Q61550 635 aaKnown RBP13.71□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Stk26Q99JT2 416 aa13.71□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Nwd1A6H603 1563 aa13.7□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Atp1b4Q99ME6 356 aa13.7□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 IbtkQ6ZPR6 1352 aaKnown RBP13.7□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Gemin5Q8BX17 1502 aaKnown RBP13.7□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Nolc1E9Q5C9 702 aaKnown RBP13.69□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 CrbnQ8C7D2 445 aa13.68□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Q9D9H8 365 aa13.68□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Ppp4r2Q0VGB7 417 aa13.66□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Cald1E9QA15 768 aaKnown RBP13.66□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Exosc9Q9JHI7 438 aaKnown RBP13.66□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Iqsec2Q5DU25 1478 aa13.65□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 Utp14aQ640M1 767 aaKnown RBP13.65□□□□□ -0.22
Ccdc87-201ENSMUST00000088653 P2rx7Q9Z1M0 595 aa13.65□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Map4k4P97820 1233 aaKnown RBP13.64□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Plekhh1Q80TI1 1356 aa13.64□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Gsto1O09131 240 aa13.64□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Golga2Q921M4 999 aa13.64□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Uspl1Q3ULM6 1089 aa13.63□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Atp2b2Q9R0K7 1198 aa13.63□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Prdm10Q3UTQ7 1184 aa13.63□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Dnajc5gQ8C632 165 aa13.63□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Slit3Q9WVB4 1523 aa13.62□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 TnikP83510 1323 aa13.62□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Cdk19Q8BWD8 501 aa13.62□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Speer4f1Q9D5Q6 258 aa13.61□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Cps1Q8C196 1500 aa13.61□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Fam71e1A1L3C1 212 aa13.61□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 GsdmaQ9EST1 446 aa13.61□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 FanciQ8K368 1330 aa13.61□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Zranb1Q7M760 708 aa13.61□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Kcnh8P59111 1102 aa13.6□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Ralbp1Q62172 648 aa13.6□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Ccdc30Q8BVF4 654 aa13.6□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Prkrip1Q9CWV6 186 aaKnown RBP13.59□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 NinlQ6ZQ12 1394 aa13.58□□□□□ -0.23
Ccdc87-201ENSMUST00000088653 Asxl2Q8BZ32 1370 aa13.58□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Usp32F8VPZ3 1604 aa13.58□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Mbd3Q9Z2D8 285 aaKnown RBP13.57□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Psme1P97371 249 aa13.57□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Dip2bQ3UH60 1574 aa13.57□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Kif1aP33173 1695 aa13.56□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Ncbp3Q8BZR9 615 aaKnown RBP13.56□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Arap3Q8R5G7 1538 aa13.56□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 NeflP08551 543 aa13.55□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Txndc2Q6P902 515 aa13.55□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Supt16hQ920B9 1047 aa13.55□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Rwdd1Q9CQK7 243 aa13.55□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Map3k19E9Q3S4 1311 aa13.55□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Tnrc6bQ8BKI2 1810 aaKnown RBP13.55□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 IghaA0A0A6YXW6 389 aa13.54□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Neurod2Q62414 383 aa13.54□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Pik3c2bE9QAN8 1632 aa13.54□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Znf541Q0GGX2 1363 aa13.54□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 PzpQ61838 1495 aa13.53□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 PtpruB1AUH1 1446 aa13.52□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Tsen2Q6P7W5 460 aa13.52□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Liat1Q810M6 228 aa13.52□□□□□ -0.24
Ccdc87-201ENSMUST00000088653 Pik3r4Q8VD65 1358 aa13.52□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 Tcerg1Q8CGF7 1100 aaKnown RBP13.52□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 U2af1Q9D883 239 aaKnown RBP13.5□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 N4bp2F8VQG7 1678 aaKnown RBP13.5□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 Idi2Q8BFZ6 227 aa13.49□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 Slc4a3P16283 1227 aa13.49□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 Rreb1Q3UH06 1700 aaKnown RBP13.48□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 Lmtk3Q5XJV6 1424 aa13.48□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 Gas2l2Q5SSG4 860 aa13.48□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 Trim28Q62318 834 aa13.48□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 Safb2Q80YR5 991 aaKnown RBP13.48□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 Uhrf1bp1B2KF50 1429 aa13.47□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 Zmym3Q9JLM4 1370 aa13.47□□□□□ -0.25
Ccdc87-201ENSMUST00000088653 D430041D05RikF6ZGR6 1678 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms