RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Rrp9Q91WM3 475 aaKnown RBP11.3□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Gsto1O09131 240 aa11.3□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Cfdp1O88271 295 aaKnown RBP11.3□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Babam1Q3UI43 333 aa11.3□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Washc2Q6PGL7 1334 aa11.29□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Q8C5K5 320 aa11.29□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Soga1E1U8D0 1418 aa11.29□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Jph4Q80WT0 628 aa11.29□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Zrsr2Q62377 462 aaKnown RBP11.29□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Apaf1O88879 1249 aa11.28□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Kif3aP28741 701 aa11.28□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Ncapd3Q6ZQK0 1506 aa11.28□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Gcom1E9PZ54 550 aa11.28□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 MyzapQ3UIJ9 466 aa11.28□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Cchcr1Q8K2I2 770 aa11.28□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Chmp7Q8R1T1 451 aa11.28□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Ints3Q7TPD0 1041 aaKnown RBP11.28□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Pabpn1Q8CCS6 302 aaKnown RBP11.28□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Ubxn4Q8VCH8 506 aa11.28□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 1700010I14RikQ7TPG0 532 aa11.27□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Ift140E9PY46 1464 aa11.27□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Fmnl2A2APV2 1086 aa11.27□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Bcl2l13P59017 434 aa11.27□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 NaspQ99MD9 773 aaKnown RBP11.27□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Rab3gap2Q8BMG7 1366 aa11.27□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Shroom4Q1W617 1475 aa11.26□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Ncoa2Q61026 1462 aa11.26□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Ccp110Q7TSH4 1004 aa11.26□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Rufy1Q8BIJ7 712 aa11.26□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Phf14Q9D4H9 881 aa11.26□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Dhx16G3X8X0 1044 aaKnown RBP11.26□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Ccdc171E9Q1U1 1324 aa11.26□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Puf60Q3UEB3 564 aaKnown RBP11.26□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Rad54l2Q99NG0 1466 aa11.26□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 CrcpO35427 148 aa11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Zkscan1Q8BGS3 561 aaKnown RBP11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Polr1aO35134 1717 aaKnown RBP11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Psma5Q9Z2U1 241 aaKnown RBP11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Cdkn1cP49919 348 aa11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Cog6Q8R3I3 657 aa11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Zkscan2G3X952 960 aa11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Mcm2P97310 904 aa11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 AnlnQ8K298 1121 aaKnown RBP11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Mns1Q61884 491 aa11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Noc3lQ8VI84 807 aaKnown RBP11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Iqgap2Q3UQ44 1575 aa11.25□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Cfap99A0A140LIX9 648 aa11.24□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Mphosph10Q810V0 681 aaKnown RBP11.24□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Gtf2f1Q3THK3 508 aaKnown RBP11.24□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 PdcQ9QW08 244 aa11.24□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Ssh1Q76I79 1042 aa11.24□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Me1P06801 572 aa11.24□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 BcanQ61361 883 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Olfml1Q8BSH2 233 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Ccdc43Q9CR29 222 aaKnown RBP11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Cavin4A2AMM0 362 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Sptbn5F6UCX4 1208 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Paxip1Q6NZQ4 1056 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Kif18aQ91WD7 886 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Naip1Q9QWK5 1403 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Nsd2Q8BVE8 1365 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Ttll5Q8CHB8 1328 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Pde4cQ3UEI1 686 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Gsdma3Q5Y4Y6 464 aa11.23□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Gtf2a1Q99PM3 378 aa11.22□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Podxl2Q8CAE9 603 aa11.22□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 March6Q6ZQ89 909 aa11.21□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Odf2A3KGV1 830 aaKnown RBP11.21□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Ncbp3Q8BZR9 615 aaKnown RBP11.21□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Nap1l1P28656 391 aaKnown RBP11.21□□□□□ -0.61
Prpf40a-201ENSMUST00000076313 Fyb1O35601 819 aa11.21□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Fez1Q8K0X8 392 aa11.21□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Q9D9H8 365 aa11.21□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Atp2b2Q9R0K7 1198 aa11.21□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 NexnQ7TPW1 607 aa11.21□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Top2aQ01320 1528 aaKnown RBP11.2□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Nop14Q8R3N1 860 aaKnown RBP11.2□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Rsph6aQ8CDR2 708 aa11.2□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Cd109Q8R422 1442 aa11.2□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Cwc15Q9JHS9 229 aaKnown RBP11.2□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Gnai2P08752 355 aaKnown RBP11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Pip4k2bQ80XI4 416 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Tmc1Q8R4P5 757 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Jakmip1Q8BVL9 626 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Q9D9S1 216 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Cnnm3Q32NY4 713 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Map3k5O35099 1380 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 MpripP97434 1024 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Gcc1Q9D4H2 778 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Myom3A2ABU4 1439 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Nphp1Q9QY53 687 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Arap1Q4LDD4 1452 aa11.19□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Arhgef5E9Q7D5 1581 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 FanciQ8K368 1330 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Hdgfl1Q2VPR5 283 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Znf692Q3U381 531 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Fnbp4Q6ZQ03 1031 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Dusp9Q7TNL7 452 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Dusp27Q148W8 1138 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Trim29Q8R2Q0 587 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 120.8 ms