RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Olfml1Q8BSH2 233 aa18.71■□□□□ 0.59
Ubr3-201ENSMUST00000055758 PdcQ9QW08 244 aa18.71■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Cep162Q6ZQ06 1403 aa18.71■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Rpap1Q80TE0 1409 aa18.71■□□□□ 0.59
Ubr3-201ENSMUST00000055758 ItpripQ3TNL8 555 aa18.71■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Nop14Q8R3N1 860 aaKnown RBP18.71■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Atl3Q91YH5 541 aa18.7■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Themis2Q91YX0 663 aa18.7■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Erich4Q3UNU4 136 aa18.7■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Ap3b2Q9JME5 1082 aa18.7■□□□□ 0.58
Ubr3-201ENSMUST00000055758 CenphQ9QYM8 241 aa18.7■□□□□ 0.58
Ubr3-201ENSMUST00000055758 OptnQ8K3K8 584 aa18.7■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Arhgef18Q6P9R4 1021 aa18.7■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Cchcr1Q8K2I2 770 aa18.69■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Trim29Q8R2Q0 587 aa18.69■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Tmc1Q8R4P5 757 aa18.69■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Usp16Q99LG0 825 aa18.69■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Homer1Q9Z2Y3 366 aa18.69■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Ppp4r3bQ922R5 820 aa18.69■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Ccdc30Q8BVF4 654 aa18.69■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Prkrip1Q9CWV6 186 aaKnown RBP18.69■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Utp14aQ640M1 767 aaKnown RBP18.68■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Erc2Q6PH08 957 aa18.68■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Sept11Q8C1B7 431 aaKnown RBP18.68■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Cep89Q9CZX2 791 aa18.68■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Ccdc102aQ3TMW1 549 aa18.68■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Kif3bQ61771 747 aa18.68■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Kiaa0753Q6A000 959 aa18.68■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Pdia4P08003 638 aaKnown RBP18.68■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Bag1Q60739 355 aa18.68■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Ccdc181Q80ZU5 509 aa18.68■□□□□ 0.58
Ubr3-201ENSMUST00000055758 TxlnbQ8VBT1 685 aa18.67■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Plekhh2Q8C115 1491 aa18.67■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Ift57Q8BXG3 429 aa18.67■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Ercc6F8VPZ5 1481 aa18.67■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Smc2Q8CG48 1191 aaKnown RBP18.66■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Cbx1P83917 185 aaKnown RBP18.66■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Ints3Q7TPD0 1041 aaKnown RBP18.66■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Slc13a4Q8BZ82 625 aa18.66■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Ppm1fQ8CGA0 452 aa18.66■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Cyp46a1Q9WVK8 500 aa18.66■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Fez1Q8K0X8 392 aa18.66■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Rnf187Q8BFX1 236 aa18.65■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Psma5Q9Z2U1 241 aaKnown RBP18.65■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Ppp2r3aB2RXC8 1150 aa18.65■□□□□ 0.58
Ubr3-201ENSMUST00000055758 Abl1P00520 1123 aa18.64■□□□□ 0.57
Ubr3-201ENSMUST00000055758 BcanQ61361 883 aa18.64■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Lemd3Q9WU40 921 aa18.64■□□□□ 0.57
Ubr3-201ENSMUST00000055758 AknaQ80VW7 1404 aa18.64■□□□□ 0.57
Ubr3-201ENSMUST00000055758 SrrtQ99MR6 875 aaKnown RBP18.64■□□□□ 0.57
Ubr3-201ENSMUST00000055758 TnmdQ9EP64 317 aa18.63■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Cetn4Q8K4K1 168 aa18.62■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Ddx23D3Z0M9 819 aaKnown RBP18.62■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Ccdc88bQ4QRL3 1481 aa18.62■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Rpgrip1lQ8CG73 1264 aa18.62■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Ciz1Q8VEH2 845 aa18.62■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Gprasp1Q5U4C1 1347 aa18.62■□□□□ 0.57
Ubr3-201ENSMUST00000055758 4921530L21RikQ9CQ47 274 aa18.62■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Cnnm3Q32NY4 713 aa18.61■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Cnksr2Q80YA9 1032 aa18.61■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Rbm28Q8CGC6 750 aaKnown RBP18.61■□□□□ 0.57
Ubr3-201ENSMUST00000055758 SkilQ60665 675 aa18.61■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Cfdp1O88271 295 aaKnown RBP18.61■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Fam184bQ0KK56 942 aa18.61■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Usp40Q8BWR4 1235 aa18.6■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Sept6Q9R1T4 434 aa18.6■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Lamb3Q61087 1168 aa18.6■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Spag5Q7TME2 1165 aa18.6■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Zkscan1Q8BGS3 561 aaKnown RBP18.6■□□□□ 0.57
Ubr3-201ENSMUST00000055758 AnlnQ8K298 1121 aaKnown RBP18.6■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Rbm25B2RY56 838 aaKnown RBP18.59■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Ppm1eQ80TL0 749 aa18.58■□□□□ 0.57
Ubr3-201ENSMUST00000055758 Trim25Q61510 634 aaKnown RBP18.58■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Abcd1P48410 736 aa18.58■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Zscan10Q3URR7 782 aa18.58■□□□□ 0.56
Ubr3-201ENSMUST00000055758 AampJ3QN89 436 aa18.57■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Stk38Q91VJ4 465 aa18.57■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Eif3aP23116 1344 aaKnown RBP18.57■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Pde1cQ64338 706 aa18.57■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Larp1Q6ZQ58 1072 aaKnown RBP18.57■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Sv2bQ8BG39 683 aa18.57■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Map2k1P31938 393 aa18.57■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Chmp7Q8R1T1 451 aa18.57■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Dapk1Q80YE7 1442 aa18.57■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Rad54l2Q99NG0 1466 aa18.56■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Bcl2l13P59017 434 aa18.56■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Map9Q3TRR0 646 aa18.56■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Mink1Q9JM52 1308 aa18.56■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Ssh1Q76I79 1042 aa18.56■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Nat10Q8K224 1024 aaKnown RBP18.56■□□□□ 0.56
Ubr3-201ENSMUST00000055758 1700010I14RikQ7TPG0 532 aa18.56■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Mctp1E9PV86 951 aa18.55■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Znf710Q3U288 666 aa18.55■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Ccdc83Q9D4V3 305 aa18.55■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Kdm4aQ8BW72 1064 aa18.55■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Otud6bQ8K2H2 294 aa18.54■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Nf2P46662 596 aa18.54■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Tax1bp1Q3UKC1 814 aaKnown RBP18.54■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Pus7B7ZNL8 666 aaKnown RBP18.54■□□□□ 0.56
Ubr3-201ENSMUST00000055758 StambpQ9CQ26 424 aa18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms