RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Abl1P00520 1123 aa21.27■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Trim29Q8R2Q0 587 aa21.27■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Cyp46a1Q9WVK8 500 aa21.27■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Iqgap2Q3UQ44 1575 aa21.27■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Urb2E9Q7L1 1524 aaKnown RBP21.27■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Fam193aQ8CGI1 1231 aaKnown RBP21.27■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Kif4P33174 1231 aa21.26■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Gpatch3Q8BIY1 525 aa21.26■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Atl3Q91YH5 541 aa21.26■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Rad54l2Q99NG0 1466 aa21.26■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Hnrnpul1Q8VDM6 859 aaKnown RBP21.26■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Klf15Q9EPW2 415 aa21.26■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Cetn4Q8K4K1 168 aa21.25■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Gripap1Q8VD04 806 aa21.25■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Stk3Q9JI10 497 aa21.25■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Mad1l1Q9WTX8 717 aaKnown RBP21.25■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Rabep1O35551 862 aa21.25■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Zfp644E9QA22 1323 aa21.24■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Fmnl2A2APV2 1086 aa21.24■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 MpripP97434 1024 aa21.24■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Gtf2f1Q3THK3 508 aaKnown RBP21.24■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Efcab5A0JP43 1406 aa21.23■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Gm21698A0A087WQP8 267 aa21.23■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Cfap99A0A140LIX9 648 aa21.23■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Gm21671G3UY31 267 aa21.23■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Cchcr1Q8K2I2 770 aa21.23■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Cd109Q8R422 1442 aa21.23■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Ankrd36D3Z4K0 1415 aa21.22■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Rbm28Q8CGC6 750 aaKnown RBP21.22■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Lrrcc1Q69ZB0 1026 aa21.21■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Nek4Q9Z1J2 792 aa21.21■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Ncbp3Q8BZR9 615 aaKnown RBP21.21■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Psma5Q9Z2U1 241 aaKnown RBP21.21■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Fkbp4P30416 458 aa21.21■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Ppp4r3bQ922R5 820 aa21.21■□□□□ 0.99
Pcdhac2-201ENSMUST00000047479 Kif3aP28741 701 aa21.2■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Agtpbp1Q641K1 1218 aa21.2■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 PogkQ80TC5 607 aa21.19■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Ccdc171E9Q1U1 1324 aa21.19■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 KarsQ99MN1 595 aaKnown RBP21.19■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Ift140E9PY46 1464 aa21.19■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Dennd6aQ8BH65 605 aa21.18■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Usp48Q3V0C5 1052 aa21.18■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Afap1Q80YS6 731 aa21.18■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Arhgap31A6X8Z5 1425 aa21.18■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Cavin4A2AMM0 362 aa21.17■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Nol12Q8BG17 217 aa21.17■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Stard3nlQ9DCI3 235 aa21.17■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Gimap6Q8K349 305 aa21.16■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Top2aQ01320 1528 aaKnown RBP21.16■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Hmgn5Q9JL35 406 aa21.16■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Prl7d1P04769 244 aa21.16■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Kcnh8P59111 1102 aa21.16■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Necab1Q8BG18 352 aa21.16■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Ints3Q7TPD0 1041 aaKnown RBP21.15■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Odf2lQ9D478 642 aa21.15■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Plekhh1Q80TI1 1356 aa21.15■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Ppp2r1aQ76MZ3 589 aa21.14■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Zkscan2G3X952 960 aa21.14■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 PsapQ61207 557 aaKnown RBP21.14■□□□□ 0.98
Pcdhac2-201ENSMUST00000047479 Mcm2P97310 904 aa21.14■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Ccdc34Q3UI66 367 aa21.14■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 OptnQ8K3K8 584 aa21.14■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Speer4bQ9D9F7 267 aa21.14■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Vps8Q0P5W1 1427 aa21.13■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Plekhd1B2RPU2 505 aa21.13■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Fbln2P37889 1221 aa21.13■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Washc4Q3UMB9 1173 aa21.13■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Cdk19Q8BWD8 501 aa21.13■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Samd1D3YXK1 519 aa21.13■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 A0A0U1RNP2 1173 aa21.12■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Apaf1O88879 1249 aa21.12■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Hdgfl1Q2VPR5 283 aa21.12■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Ehmt1Q5DW34 1296 aa21.12■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Cabp2Q9JLK4 216 aa21.12■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Fnbp4Q6ZQ03 1031 aa21.12■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Hap1O35668 628 aa21.12■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Q7TT23 1179 aa21.12■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 SkilQ60665 675 aa21.12■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Ubxn4Q8VCH8 506 aa21.11■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Gcom1E9PZ54 550 aa21.11■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 MyzapQ3UIJ9 466 aa21.11■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Gnai2P08752 355 aaKnown RBP21.11■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Fgd6Q69ZL1 1399 aa21.1■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Gm21663A0A0G2JE01 267 aa21.1■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Gm7361D3Z6R1 267 aa21.1■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 5031410I06RikE9Q4E0 267 aa21.1■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Gm1979E9QAN3 267 aa21.1■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Gm5862K7N5V5 267 aa21.1■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Gm10220K7N660 267 aa21.1■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Sycp1Q62209 993 aa21.1■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Gm21680A0A0G2JGR8 267 aa21.1■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Dixdc1Q80Y83 711 aa21.09■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Smc2Q8CG48 1191 aaKnown RBP21.09■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Rab3gap2Q8BMG7 1366 aa21.09■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Sugp2Q8CH09 1067 aa21.09■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 TkfcQ8VC30 578 aa21.09■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Znhit6Q3UFB2 460 aaKnown RBP21.08■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Nol8Q3UHX0 1147 aaKnown RBP21.08■□□□□ 0.97
Pcdhac2-201ENSMUST00000047479 Znf704Q9ERQ3 566 aa21.08■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms