RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 EspnQ9ET47 871 aa11.79□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Kif16bB1AVY7 1312 aa11.79□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Cdk13Q69ZA1 1511 aaKnown RBP11.79□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Ttll13A4Q9F6 804 aa11.79□□□□□ -0.52
Rnf43-201ENSMUST00000040089 HdgfP51859 237 aaKnown RBP11.79□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Ddx54Q8K4L0 874 aaKnown RBP11.79□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Mug2P28666 1451 aa11.79□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Naip6Q9JIB6 1403 aa11.79□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Ccdc60Q8C4J0 545 aa11.78□□□□□ -0.52
Rnf43-201ENSMUST00000040089 AatkQ80YE4 1365 aa11.78□□□□□ -0.52
Rnf43-201ENSMUST00000040089 PtprgQ05909 1442 aa11.78□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Nectin2P32507 530 aa11.78□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.77□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Mre11Q61216 706 aa11.77□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Ccdc30Q8BVF4 654 aa11.77□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Acsbg1Q99PU5 721 aa11.77□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Cdc42bpaQ3UU96 1719 aa11.76□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Prrc2bQ7TPM1 1486 aaKnown RBP11.76□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Rab3gap2Q8BMG7 1366 aa11.76□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Pank1Q8K4K6 548 aa11.75□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Eif2s2Q99L45 331 aaKnown RBP11.75□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Mbd3Q9Z2D8 285 aaKnown RBP11.75□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Gm10471E9Q1C7 252 aa11.75□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Cald1E9QA15 768 aaKnown RBP11.75□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Edc4Q3UJB9 1406 aaKnown RBP11.75□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Pdcl3Q8BVF2 240 aa11.75□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Nutm1Q8BHP2 1126 aa11.74□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Cc2d1aQ8K1A6 943 aa11.74□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Abcc6Q9R1S7 1498 aa11.74□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Bcl2l13P59017 434 aa11.74□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Htatsf1Q8BGC0 757 aa11.74□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Dennd6aQ8BH65 605 aa11.74□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Sirt1Q923E4 737 aa11.74□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Fmn2Q9JL04 1578 aa11.73□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Plcb2A3KGF7 1181 aa11.73□□□□□ -0.53
Rnf43-201ENSMUST00000040089 AU022751B1B0V2 589 aa11.73□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Zranb3Q6NZP1 1069 aa11.73□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Cabp2Q9JLK4 216 aa11.73□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Mcm10Q0VBD2 885 aa11.72□□□□□ -0.53
Rnf43-201ENSMUST00000040089 PalmQ9Z0P4 383 aa11.72□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Ccar1Q8CH18 1146 aaKnown RBP11.72□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Atxn3Q9CVD2 355 aa11.72□□□□□ -0.53
Rnf43-201ENSMUST00000040089 Usp54Q8BL06 1588 aaKnown RBP11.71□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Synj2Q9D2G5 1434 aa11.71□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Zfp777B9EKF4 885 aa11.71□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Usp16Q99LG0 825 aa11.71□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Hfm1D3Z4R1 1434 aa11.7□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Gm21698A0A087WQP8 267 aa11.7□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Mfap1aC0HKD8 439 aaKnown RBP11.7□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Mfap1bC0HKD9 439 aaKnown RBP11.7□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Gm21671G3UY31 267 aa11.7□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Dusp27Q148W8 1138 aa11.7□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Dnttip2Q8R2M2 758 aaKnown RBP11.7□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Ak7Q9D2H2 614 aa11.7□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Ak9G3UYQ4 1894 aa11.69□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Chd1P40201 1711 aa11.69□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Ggnbp2Q5SV77 696 aa11.68□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Ralbp1Q62172 648 aa11.68□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Ipo8Q7TMY7 1010 aa11.68□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Slc12a5Q91V14 1138 aa11.68□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Kank1E9Q238 1360 aa11.68□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Ccne1Q61457 408 aa11.68□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Tmem132eQ6IEE6 982 aa11.68□□□□□ -0.54
Rnf43-201ENSMUST00000040089 GorabQ8BRM2 368 aa11.68□□□□□ -0.54
Rnf43-201ENSMUST00000040089 RalgapbQ8BQZ4 1484 aa11.68□□□□□ -0.54
Rnf43-201ENSMUST00000040089 NinlQ6ZQ12 1394 aa11.67□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Dnajc5P60904 198 aa11.67□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Tspyl2Q7TQI8 677 aa11.67□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Rbm25B2RY56 838 aaKnown RBP11.67□□□□□ -0.54
Rnf43-201ENSMUST00000040089 G3bp1P97855 465 aaKnown RBP11.67□□□□□ -0.54
Rnf43-201ENSMUST00000040089 KarsQ99MN1 595 aaKnown RBP11.67□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Tarbp1E9Q368 1579 aa11.67□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Mast1Q9R1L5 1570 aa11.66□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Ddx17Q501J6 650 aaKnown RBP11.66□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Taok2Q6ZQ29 1240 aa11.66□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Swt1Q9DBQ9 907 aa11.66□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Zfyve16Q80U44 1528 aa11.66□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Ythdc1E9Q5K9 736 aaKnown RBP11.66□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Skint5A7XUY5 1461 aa11.66□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Supt6hQ62383 1726 aaKnown RBP11.65□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Fam50bQ9WTJ8 334 aa11.65□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Pprc1Q6NZN1 1644 aa11.65□□□□□ -0.54
Rnf43-201ENSMUST00000040089 CatipB9EKE5 520 aa11.65□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Nkx1-2P42580 305 aa11.65□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Kif1bQ60575 1816 aaKnown RBP11.65□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Chmp7Q8R1T1 451 aa11.65□□□□□ -0.54
Rnf43-201ENSMUST00000040089 Gtf2a1Q99PM3 378 aa11.65□□□□□ -0.54
Rnf43-201ENSMUST00000040089 NhsB1AV60 1647 aa11.65□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Talpid3E9PV87 1520 aa11.64□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Fndc1E9Q043 1732 aa11.64□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Fmnl2A2APV2 1086 aa11.64□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Nos1Q9Z0J4 1429 aa11.63□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Cavin4A2AMM0 362 aa11.63□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Ciz1Q8VEH2 845 aa11.63□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Cpsf1Q9EPU4 1441 aaKnown RBP11.63□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Erbb3Q61526 1339 aa11.62□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Idi2Q8BFZ6 227 aa11.62□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Naip7Q9JIB3 1402 aa11.62□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Idi1P58044 227 aa11.62□□□□□ -0.55
Rnf43-201ENSMUST00000040089 Farp2Q91VS8 1065 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms