RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 InsrP15208 1372 aa16.77■□□□□ 0.28
Rnf4-201ENSMUST00000030992 Plekhh1Q80TI1 1356 aa16.77■□□□□ 0.28
Rnf4-201ENSMUST00000030992 Eif2ak4Q9QZ05 1648 aa16.77■□□□□ 0.27
Rnf4-201ENSMUST00000030992 Slc52a2Q9D8F3 450 aa16.76■□□□□ 0.27
Rnf4-201ENSMUST00000030992 Yeats2Q3TUF7 1407 aa16.76■□□□□ 0.27
Rnf4-201ENSMUST00000030992 Mbd3Q9Z2D8 285 aaKnown RBP16.75■□□□□ 0.27
Rnf4-201ENSMUST00000030992 NeflP08551 543 aa16.75■□□□□ 0.27
Rnf4-201ENSMUST00000030992 Nlrp6Q91WS2 869 aa16.71■□□□□ 0.27
Rnf4-201ENSMUST00000030992 Scaf11E9PZM7 1456 aaKnown RBP16.71■□□□□ 0.27
Rnf4-201ENSMUST00000030992 Hfm1D3Z4R1 1434 aa16.71■□□□□ 0.27
Rnf4-201ENSMUST00000030992 Ahdc1Q6PAL7 1594 aaKnown RBP16.71■□□□□ 0.27
Rnf4-201ENSMUST00000030992 Qser1A2BIE1 1698 aa16.71■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Adgrl1Q80TR1 1466 aa16.71■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Stag3O70576 1240 aa16.71■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Uspl1Q3ULM6 1089 aa16.7■□□□□ 0.26
Rnf4-201ENSMUST00000030992 IbtkQ6ZPR6 1352 aaKnown RBP16.7■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Cfap65Q3V0B4 1847 aa16.7■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Rwdd1Q9CQK7 243 aa16.7■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Speer4f1Q9D5Q6 258 aa16.7■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Ccdc30Q8BVF4 654 aa16.69■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Nrxn1Q9CS84 1514 aa16.69■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Kdm2bQ6P1G2 1309 aa16.69■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Cnga1P29974 684 aa16.68■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Golga2Q921M4 999 aa16.68■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Iqsec2Q5DU25 1478 aa16.68■□□□□ 0.26
Rnf4-201ENSMUST00000030992 PtprmP28828 1452 aa16.68■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Hecw2Q6I6G8 1578 aa16.68■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Arhgap23Q69ZH9 1483 aa16.68■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Map4k4P97820 1233 aaKnown RBP16.67■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Synj2Q9D2G5 1434 aa16.67■□□□□ 0.26
Rnf4-201ENSMUST00000030992 CenpjQ569L8 1344 aa16.67■□□□□ 0.26
Rnf4-201ENSMUST00000030992 P2rx7Q9Z1M0 595 aa16.67■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Prrc2bQ7TPM1 1486 aaKnown RBP16.67■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Zmym3Q9JLM4 1370 aa16.67■□□□□ 0.26
Rnf4-201ENSMUST00000030992 IqubQ8CDK3 788 aa16.67■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Med14A2ABV5 1459 aaKnown RBP16.65■□□□□ 0.26
Rnf4-201ENSMUST00000030992 Ralbp1Q62172 648 aa16.65■□□□□ 0.26
Rnf4-201ENSMUST00000030992 CltcQ68FD5 1675 aaKnown RBP16.64■□□□□ 0.25
Rnf4-201ENSMUST00000030992 Cald1E9QA15 768 aaKnown RBP16.63■□□□□ 0.25
Rnf4-201ENSMUST00000030992 Ipo9Q91YE6 1041 aa16.63■□□□□ 0.25
Rnf4-201ENSMUST00000030992 Itsn1Q9Z0R4 1714 aa16.62■□□□□ 0.25
Rnf4-201ENSMUST00000030992 Ttll13A4Q9F6 804 aa16.61■□□□□ 0.25
Rnf4-201ENSMUST00000030992 Kif13aQ9EQW7 1749 aa16.61■□□□□ 0.25
Rnf4-201ENSMUST00000030992 Cep170bQ80U49 1574 aa16.61■□□□□ 0.25
Rnf4-201ENSMUST00000030992 Arhgef28P97433 1693 aa16.61■□□□□ 0.25
Rnf4-201ENSMUST00000030992 Neurod2Q62414 383 aa16.6■□□□□ 0.25
Rnf4-201ENSMUST00000030992 GsdmaQ9EST1 446 aa16.6■□□□□ 0.25
Rnf4-201ENSMUST00000030992 Prdm10Q3UTQ7 1184 aa16.58■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Gas2l2Q5SSG4 860 aa16.57■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Ncbp3Q8BZR9 615 aaKnown RBP16.57■□□□□ 0.24
Rnf4-201ENSMUST00000030992 NktrP30415 1453 aa16.56■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Abca14E9Q8F8 1683 aa16.55■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Naip7Q9JIB3 1402 aa16.55■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Shq1Q7TMX5 569 aa16.55■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Znf521Q6KAS7 1311 aa16.54■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Stk26Q99JT2 416 aa16.54■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Apbb1Q9QXJ1 710 aa16.53■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Plekhg1F6S200 1446 aa16.53■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Smc5Q8CG46 1101 aaKnown RBP16.53■□□□□ 0.24
Rnf4-201ENSMUST00000030992 PplQ9R269 1755 aa16.53■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Rsph4aQ8BYM7 716 aa16.52■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Exosc9Q9JHI7 438 aaKnown RBP16.52■□□□□ 0.24
Rnf4-201ENSMUST00000030992 Atxn3Q9CVD2 355 aa16.52■□□□□ 0.23
Rnf4-201ENSMUST00000030992 RictorQ6QI06 1708 aa16.51■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Zranb1Q7M760 708 aa16.51■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Zc3h13E9Q784 1729 aaKnown RBP16.5■□□□□ 0.23
Rnf4-201ENSMUST00000030992 EspnQ9ET47 871 aa16.5■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Nwd1A6H603 1563 aa16.49■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Afap1Q80YS6 731 aa16.49■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Fam135bQ9DAI6 1403 aa16.49■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Gsto1O09131 240 aa16.48■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Tspyl2Q7TQI8 677 aa16.48■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Znf541Q0GGX2 1363 aa16.48■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Tsen2Q6P7W5 460 aa16.48■□□□□ 0.23
Rnf4-201ENSMUST00000030992 B4galnt3Q6L8S8 986 aa16.48■□□□□ 0.23
Rnf4-201ENSMUST00000030992 NpatQ8BMA5 1420 aa16.47■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Apaf1O88879 1249 aa16.47■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Q9D9H8 365 aa16.47■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Usp32F8VPZ3 1604 aa16.47■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Mapk8ip3Q9ESN9 1337 aa16.47■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Trim58Q5NCC9 485 aa16.46■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Atp1b4Q99ME6 356 aa16.46■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Chmp5Q9D7S9 219 aa16.46■□□□□ 0.23
Rnf4-201ENSMUST00000030992 Ppp1r18Q8BQ30 594 aa16.46■□□□□ 0.23
Rnf4-201ENSMUST00000030992 U2af1Q9D883 239 aaKnown RBP16.46■□□□□ 0.23
Rnf4-201ENSMUST00000030992 NinlQ6ZQ12 1394 aa16.45■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Ercc6l2Q9JIM3 1537 aa16.45■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Cdk19Q8BWD8 501 aa16.45■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Pank1Q8K4K6 548 aa16.45■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Atp2b2Q9R0K7 1198 aa16.45■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Dip2aQ8BWT5 1523 aa16.44■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Utp14aQ640M1 767 aaKnown RBP16.44■□□□□ 0.22
Rnf4-201ENSMUST00000030992 AampJ3QN89 436 aa16.44■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Uhrf1bp1B2KF50 1429 aa16.43■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Nkx1-2P42580 305 aa16.42■□□□□ 0.22
Rnf4-201ENSMUST00000030992 FanciQ8K368 1330 aa16.42■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Dbr1Q923B1 550 aa16.41■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Ccdc27Q3V036 639 aa16.41■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Dusp27Q148W8 1138 aa16.4■□□□□ 0.22
Rnf4-201ENSMUST00000030992 Duxf3A0A0N4SV92 674 aa16.4■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms