RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 IqubQ8CDK3 788 aa32.55■■■□□ 2.8
Cldnd1-201ENSMUST00000023426 Usp19Q3UJD6 1360 aa32.54■■■□□ 2.8
Cldnd1-201ENSMUST00000023426 Lrrc7Q80TE7 1490 aa32.53■■■□□ 2.8
Cldnd1-201ENSMUST00000023426 Knl1Q66JQ7 1612 aa32.52■■■□□ 2.8
Cldnd1-201ENSMUST00000023426 Speer4f1Q9D5Q6 258 aa32.5■■■□□ 2.79
Cldnd1-201ENSMUST00000023426 Eif2ak4Q9QZ05 1648 aa32.49■■■□□ 2.79
Cldnd1-201ENSMUST00000023426 Golga2Q921M4 999 aa32.49■■■□□ 2.79
Cldnd1-201ENSMUST00000023426 Ift172Q6VH22 1749 aa32.49■■■□□ 2.79
Cldnd1-201ENSMUST00000023426 CenpjQ569L8 1344 aa32.48■■■□□ 2.79
Cldnd1-201ENSMUST00000023426 Adgrl3Q80TS3 1537 aa32.47■■■□□ 2.79
Cldnd1-201ENSMUST00000023426 Kiaa1107Q80TK0 1369 aa32.46■■■□□ 2.79
Cldnd1-201ENSMUST00000023426 Ccdc30Q8BVF4 654 aa32.45■■■□□ 2.79
Cldnd1-201ENSMUST00000023426 Ralbp1Q62172 648 aa32.45■■■□□ 2.78
Cldnd1-201ENSMUST00000023426 Ttc37F8VPK0 1563 aa32.45■■■□□ 2.78
Cldnd1-201ENSMUST00000023426 Map4k4P97820 1233 aaKnown RBP32.44■■■□□ 2.78
Cldnd1-201ENSMUST00000023426 Cnga1P29974 684 aa32.43■■■□□ 2.78
Cldnd1-201ENSMUST00000023426 Uspl1Q3ULM6 1089 aa32.43■■■□□ 2.78
Cldnd1-201ENSMUST00000023426 Ipo9Q91YE6 1041 aa32.39■■■□□ 2.78
Cldnd1-201ENSMUST00000023426 Hfm1D3Z4R1 1434 aa32.38■■■□□ 2.77
Cldnd1-201ENSMUST00000023426 Yeats2Q3TUF7 1407 aa32.38■■■□□ 2.77
Cldnd1-201ENSMUST00000023426 Cul9Q80TT8 1865 aa32.37■■■□□ 2.77
Cldnd1-201ENSMUST00000023426 IbtkQ6ZPR6 1352 aaKnown RBP32.37■■■□□ 2.77
Cldnd1-201ENSMUST00000023426 Zmym3Q9JLM4 1370 aa32.37■■■□□ 2.77
Cldnd1-201ENSMUST00000023426 Scaf11E9PZM7 1456 aaKnown RBP32.37■■■□□ 2.77
Cldnd1-201ENSMUST00000023426 Rsph4aQ8BYM7 716 aa32.36■■■□□ 2.77
Cldnd1-201ENSMUST00000023426 Cald1E9QA15 768 aaKnown RBP32.35■■■□□ 2.77
Cldnd1-201ENSMUST00000023426 Synj2Q9D2G5 1434 aa32.34■■■□□ 2.77
Cldnd1-201ENSMUST00000023426 Neurod2Q62414 383 aa32.32■■■□□ 2.76
Cldnd1-201ENSMUST00000023426 Kdm2bQ6P1G2 1309 aa32.32■■■□□ 2.76
Cldnd1-201ENSMUST00000023426 GsdmaQ9EST1 446 aa32.32■■■□□ 2.76
Cldnd1-201ENSMUST00000023426 Prrc2bQ7TPM1 1486 aaKnown RBP32.31■■■□□ 2.76
Cldnd1-201ENSMUST00000023426 Cfap65Q3V0B4 1847 aa32.31■■■□□ 2.76
Cldnd1-201ENSMUST00000023426 Ahdc1Q6PAL7 1594 aaKnown RBP32.29■■■□□ 2.76
Cldnd1-201ENSMUST00000023426 Arhgap23Q69ZH9 1483 aa32.28■■■□□ 2.76
Cldnd1-201ENSMUST00000023426 Ttll13A4Q9F6 804 aa32.28■■■□□ 2.76
Cldnd1-201ENSMUST00000023426 Prdm10Q3UTQ7 1184 aa32.26■■■□□ 2.75
Cldnd1-201ENSMUST00000023426 Ncbp3Q8BZR9 615 aaKnown RBP32.26■■■□□ 2.75
Cldnd1-201ENSMUST00000023426 Nrxn1Q9CS84 1514 aa32.26■■■□□ 2.75
Cldnd1-201ENSMUST00000023426 Adgrl1Q80TR1 1466 aa32.23■■■□□ 2.75
Cldnd1-201ENSMUST00000023426 Exosc9Q9JHI7 438 aaKnown RBP32.23■■■□□ 2.75
Cldnd1-201ENSMUST00000023426 P2rx7Q9Z1M0 595 aa32.23■■■□□ 2.75
Cldnd1-201ENSMUST00000023426 Hecw2Q6I6G8 1578 aa32.21■■■□□ 2.75
Cldnd1-201ENSMUST00000023426 Iqsec2Q5DU25 1478 aa32.21■■■□□ 2.75
Cldnd1-201ENSMUST00000023426 Qser1A2BIE1 1698 aa32.21■■■□□ 2.75
Cldnd1-201ENSMUST00000023426 Med14A2ABV5 1459 aaKnown RBP32.2■■■□□ 2.75
Cldnd1-201ENSMUST00000023426 Shq1Q7TMX5 569 aa32.19■■■□□ 2.74
Cldnd1-201ENSMUST00000023426 PtprmP28828 1452 aa32.18■■■□□ 2.74
Cldnd1-201ENSMUST00000023426 Stk26Q99JT2 416 aa32.18■■■□□ 2.74
Cldnd1-201ENSMUST00000023426 EspnQ9ET47 871 aa32.17■■■□□ 2.74
Cldnd1-201ENSMUST00000023426 Atp1b4Q99ME6 356 aa32.15■■■□□ 2.74
Cldnd1-201ENSMUST00000023426 Apbb1Q9QXJ1 710 aa32.15■■■□□ 2.74
Cldnd1-201ENSMUST00000023426 AampJ3QN89 436 aa32.14■■■□□ 2.74
Cldnd1-201ENSMUST00000023426 Mapk8ip3Q9ESN9 1337 aa32.12■■■□□ 2.73
Cldnd1-201ENSMUST00000023426 Smc5Q8CG46 1101 aaKnown RBP32.11■■■□□ 2.73
Cldnd1-201ENSMUST00000023426 CltcQ68FD5 1675 aaKnown RBP32.1■■■□□ 2.73
Cldnd1-201ENSMUST00000023426 Gsto1O09131 240 aa32.1■■■□□ 2.73
Cldnd1-201ENSMUST00000023426 Plekhg1F6S200 1446 aa32.09■■■□□ 2.73
Cldnd1-201ENSMUST00000023426 Tsen2Q6P7W5 460 aa32.08■■■□□ 2.73
Cldnd1-201ENSMUST00000023426 Ppp1r18Q8BQ30 594 aa32.08■■■□□ 2.73
Cldnd1-201ENSMUST00000023426 Chmp5Q9D7S9 219 aa32.08■■■□□ 2.73
Cldnd1-201ENSMUST00000023426 Trim58Q5NCC9 485 aa32.06■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 U2af1Q9D883 239 aaKnown RBP32.06■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 Arhgef28P97433 1693 aa32.05■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 Cep170bQ80U49 1574 aa32.05■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 Gas2l2Q5SSG4 860 aa32.05■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 Afap1Q80YS6 731 aa32.04■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 Naip7Q9JIB3 1402 aa32.04■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 Znf521Q6KAS7 1311 aa32.04■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 B4galnt3Q6L8S8 986 aa32.02■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 Ciz1Q8VEH2 845 aa32.02■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 Utp14aQ640M1 767 aaKnown RBP32.02■■■□□ 2.72
Cldnd1-201ENSMUST00000023426 Q9D9H8 365 aa32.01■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Ccdc27Q3V036 639 aa32■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Atxn3Q9CVD2 355 aa32■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Kif13aQ9EQW7 1749 aa32■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Itsn1Q9Z0R4 1714 aa32■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Atp2b2Q9R0K7 1198 aa32■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Fam135bQ9DAI6 1403 aa31.99■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Cdk19Q8BWD8 501 aa31.99■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 FanciQ8K368 1330 aa31.99■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Apaf1O88879 1249 aa31.98■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Tspyl2Q7TQI8 677 aa31.96■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 NpatQ8BMA5 1420 aa31.95■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Zranb1Q7M760 708 aa31.95■■■□□ 2.71
Cldnd1-201ENSMUST00000023426 Pank1Q8K4K6 548 aa31.94■■■□□ 2.7
Cldnd1-201ENSMUST00000023426 NktrP30415 1453 aa31.94■■■□□ 2.7
Cldnd1-201ENSMUST00000023426 Ccar1Q8CH18 1146 aaKnown RBP31.94■■■□□ 2.7
Cldnd1-201ENSMUST00000023426 Znf541Q0GGX2 1363 aa31.93■■■□□ 2.7
Cldnd1-201ENSMUST00000023426 Ksr2Q3UVC0 959 aa31.91■■■□□ 2.7
Cldnd1-201ENSMUST00000023426 Dbr1Q923B1 550 aa31.91■■■□□ 2.7
Cldnd1-201ENSMUST00000023426 Abca14E9Q8F8 1683 aa31.91■■■□□ 2.7
Cldnd1-201ENSMUST00000023426 NinlQ6ZQ12 1394 aa31.9■■■□□ 2.7
Cldnd1-201ENSMUST00000023426 Dusp27Q148W8 1138 aa31.88■■■□□ 2.69
Cldnd1-201ENSMUST00000023426 Zc3h13E9Q784 1729 aaKnown RBP31.88■■■□□ 2.69
Cldnd1-201ENSMUST00000023426 NudcO35685 332 aaKnown RBP31.86■■■□□ 2.69
Cldnd1-201ENSMUST00000023426 Cavin4A2AMM0 362 aa31.84■■■□□ 2.69
Cldnd1-201ENSMUST00000023426 RictorQ6QI06 1708 aa31.84■■■□□ 2.69
Cldnd1-201ENSMUST00000023426 PplQ9R269 1755 aa31.83■■■□□ 2.69
Cldnd1-201ENSMUST00000023426 Uhrf1bp1B2KF50 1429 aa31.83■■■□□ 2.69
Cldnd1-201ENSMUST00000023426 Fchsd2Q3USJ8 740 aa31.82■■■□□ 2.69
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms