RNA–Protein interactions for RNA: ENSMUST00000004428.13

Clcn5-201, Transcript of H(+)/Cl(-) exchange transporter 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn5, Length 8,390 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5-201ENSMUST00000004428 Calcoco1Q8CGU1 691 aa7.84□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Sf3a1Q8K4Z5 791 aaKnown RBP7.84□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Fam114a2Q8VE88 497 aa7.84□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Gigyf2Q6Y7W8 1291 aaKnown RBP7.83□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Kdm2bQ6P1G2 1309 aa7.83□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Gbp1Q01514 589 aa7.83□□□□□ -1.16
Clcn5-201ENSMUST00000004428 TchhA0A0B4J1F9 1599 aa7.83□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Lrrfip1Q3UZ39 729 aaKnown RBP7.83□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Fmnl3Q6ZPF4 1028 aa7.82□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Ccdc102aQ3TMW1 549 aa7.82□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Ankrd36D3Z4K0 1415 aa7.82□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Thoc2B1AZI6 1594 aaKnown RBP7.82□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Gbp4Q61107 620 aa7.82□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Jph4Q80WT0 628 aa7.82□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Prdm16A2A935 1275 aa7.82□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Fam163aQ8CAA5 168 aa7.82□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Erc1Q99MI1 1120 aa7.82□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Apol7cQ8C6E1 369 aa7.82□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Gm21969J3QJZ1 289 aa7.81□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Sh3bgrQ9WUZ7 214 aa7.81□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Sh3bp5Q9Z131 463 aa7.81□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Hspa5P20029 655 aaKnown RBP7.81□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Nf2P46662 596 aa7.81□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Erlin1Q91X78 346 aa7.81□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Chic2Q9D9G3 165 aa7.81□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Trim29Q8R2Q0 587 aa7.81□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Smc1aQ9CU62 1233 aaKnown RBP7.81□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Ccnb3Q810T2 1396 aa7.81□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Cluap1Q8R3P7 413 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Gpatch3Q8BIY1 525 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Rad21Q61550 635 aaKnown RBP7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Pole3Q9JKP7 145 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Igf1rQ60751 1373 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Tmf1B9EKI3 1091 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Camk4P08414 469 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Ccdc25Q78PG9 208 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Ipo4Q8VI75 1082 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 EprsQ8CGC7 1512 aaKnown RBP7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Rock1P70335 1354 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 NinlQ6ZQ12 1394 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Casq1O09165 405 aa7.8□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Smc4Q8CG47 1286 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Sh2d4bA6X942 431 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Ccdc191J3QQ27 883 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Hdgfl1Q2VPR5 283 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Cetn2Q9R1K9 172 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Lrrfip2Q91WK0 415 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 IncenpQ9WU62 880 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Rtn4Q99P72 1162 aaKnown RBP7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Rrp7aQ9D1C9 280 aaKnown RBP7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Nsd2Q8BVE8 1365 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Mroh3A0A1D5RM54 893 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Eif2aQ8BJW6 581 aaKnown RBP7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 ClasrpQ8CFC7 668 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Gm7298A0A0N4SVU1 1476 aa7.79□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Stmn4P63042 189 aa7.78□□□□□ -1.16
Clcn5-201ENSMUST00000004428 P3h3Q8CG70 732 aa7.78□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Nolc1E9Q5C9 702 aaKnown RBP7.78□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Gabpb2P81069 414 aa7.78□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Zc3h18Q0P678 948 aaKnown RBP7.78□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Spag5Q7TME2 1165 aa7.78□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Mnat1P51949 309 aa7.78□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Zhx1P70121 873 aa7.78□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Gm14025A2AP89 1413 aa7.78□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Olfml1Q8BSH2 233 aa7.77□□□□□ -1.16
Clcn5-201ENSMUST00000004428 MicalclQ9D5U9 680 aa7.77□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Arhgef5E9Q7D5 1581 aa7.77□□□□□ -1.16
Clcn5-201ENSMUST00000004428 Ccdc141E9Q8Q6 1531 aa7.77□□□□□ -1.17
Clcn5-201ENSMUST00000004428 NcapgE9PWG6 1004 aa7.77□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Ppp4r3bQ922R5 820 aa7.77□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Tmco3Q8BH01 678 aa7.77□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Zscan21Q07231 555 aa7.77□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Map4P27546 1125 aaKnown RBP7.77□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Spryd3E9Q9B3 442 aa7.77□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Srpk2O54781 681 aaKnown RBP7.77□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Ranbp1P34022 203 aaKnown RBP7.77□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Diaph1O08808 1255 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Zrsr1Q64707 428 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Arhgap31A6X8Z5 1425 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Syap1Q9D5V6 365 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Otud6bQ8K2H2 294 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Znf704Q9ERQ3 566 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Rassf4Q8CB96 322 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 MecomP14404 1042 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Ppfia3P60469 1194 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Stim1P70302 685 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Ccdc70Q9D9B0 223 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 MvpQ9EQK5 861 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Vps8Q0P5W1 1427 aa7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Psma5Q9Z2U1 241 aaKnown RBP7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Aimp1P31230 310 aaKnown RBP7.76□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Znf771Q8BJ90 317 aa7.75□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Tiam1Q60610 1591 aa7.75□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Map3k9Q3U1V8 1077 aa7.75□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Smtnl1Q99LM3 459 aa7.75□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Chmp3Q9CQ10 224 aa7.75□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Znf710Q3U288 666 aa7.75□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Ppp1r1bQ60829 194 aa7.75□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Shtn1Q8K2Q9 631 aa7.75□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Kiaa1328Q6NZK5 612 aa7.75□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms