RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 QCR9P22289 66 aa0.16□□□□□ -2.38
snR35snR35 MLP1Q02455 1875 aaKnown RBP0.16□□□□□ -2.38
snR35snR35 SWM2P40342 146 aa0.15□□□□□ -2.39
snR35snR35 APC1P53886 1748 aa0.13□□□□□ -2.39
snR35snR35 ATP17Q06405 101 aa0.13□□□□□ -2.39
snR35snR35 YGR121W-AQ3E816 71 aa0.13□□□□□ -2.39
snR35snR35 ESP1Q03018 1630 aa0.13□□□□□ -2.39
snR35snR35 TY2B-CP25384 1770 aa0.12□□□□□ -2.39
snR35snR35 TY2B-DR1Q12472 1770 aa0.12□□□□□ -2.39
snR35snR35 YLR146W-AQ2V2P1 62 aa0.12□□□□□ -2.39
snR35snR35 SMC4Q12267 1418 aa0.11□□□□□ -2.39
snR35snR35 OLI1P61829 76 aa0.09□□□□□ -2.4
snR35snR35 LSM2P38203 95 aaKnown RBP0.08□□□□□ -2.4
snR35snR35 YGR035W-AQ45U48 73 aa0.07□□□□□ -2.4
snR35snR35 UTP20P35194 2493 aaKnown RBP0.06□□□□□ -2.4
snR35snR35 YKL018C-AQ3E7A7 99 aa0.05□□□□□ -2.4
snR35snR35 PAU7P39545 55 aa0.04□□□□□ -2.4
snR35snR35 YOR032W-AQ8TGS1 66 aa0.04□□□□□ -2.4
snR35snR35 YMR001C-AQ8TGS9 76 aa0.04□□□□□ -2.4
snR35snR35 TIM12P32830 109 aa0.03□□□□□ -2.4
snR35snR35 SIP18P50263 79 aa0.03□□□□□ -2.4
snR35snR35 YDR119W-AQ2V2P9 66 aa0.03□□□□□ -2.4
snR35snR35 TY2B-LR1P0C2J3 1770 aa0.02□□□□□ -2.41
snR35snR35 TY2B-FP0CX63 1770 aa0.02□□□□□ -2.41
snR35snR35 TY2B-GR2P0CX64 1770 aa0.02□□□□□ -2.41
snR35snR35 TY2B-DR2Q03494 1770 aa0.02□□□□□ -2.41
snR35snR35 TY2B-OR1Q12113 1770 aa0.02□□□□□ -2.41
snR35snR35 TY2B-BQ12491 1770 aa0.02□□□□□ -2.41
snR35snR35 TY2B-OR2Q12501 1770 aa0.02□□□□□ -2.41
snR35snR35 RPS27AP35997 82 aaKnown RBP0.02□□□□□ -2.41
snR35snR35 YBR200W-AQ3E755 54 aa0.02□□□□□ -2.41
snR35snR35 YOR008C-AQ3E7B9 74 aa0.02□□□□□ -2.41
snR35snR35 KOG1P38873 1557 aa0.02□□□□□ -2.41
snR35snR35 RPS29AP41057 56 aaKnown RBP0.01□□□□□ -2.41
snR35snR35 YDR182W-AQ3E796 67 aa0.01□□□□□ -2.41
snR35snR35 IRC20Q06554 1556 aa0.01□□□□□ -2.41
snR35snR35 YOR011W-AQ3E807 68 aa0□□□□□ -2.41
snR35snR35 YOR394C-AQ8TGJ0 55 aa0□□□□□ -2.41
snR35snR35 TY2B-DR3Q07791 1770 aaKnown RBP-0.01□□□□□ -2.41
snR35snR35 YBL039W-BP0C268 59 aa-0.02□□□□□ -2.41
snR35snR35 SSS1P35179 80 aa-0.02□□□□□ -2.41
snR35snR35 YHR213W-AQ8TGT4 77 aa-0.02□□□□□ -2.41
snR35snR35 HUB1Q6Q546 73 aa-0.06□□□□□ -2.42
snR35snR35 VTH1P40438 1549 aa-0.07□□□□□ -2.42
snR35snR35 VTH2P40890 1549 aa-0.07□□□□□ -2.42
snR35snR35 UFD4P33202 1483 aa-0.09□□□□□ -2.42
snR35snR35 SPI1P40092 148 aa-0.1□□□□□ -2.43
snR35snR35 TOS6P48560 102 aa-0.1□□□□□ -2.43
snR35snR35 ERI1P62651 68 aaKnown RBP-0.1□□□□□ -2.43
snR35snR35 TY1B-NL2Q99337 1749 aaKnown RBP-0.12□□□□□ -2.43
snR35snR35 TY3B-GQ99315 1547 aa-0.13□□□□□ -2.43
snR35snR35 NUP159P40477 1460 aa-0.13□□□□□ -2.43
snR35snR35 DOP1Q03921 1698 aa-0.14□□□□□ -2.43
snR35snR35 YFL041W-AQ3E817 63 aa-0.14□□□□□ -2.43
snR35snR35 RPO21P04050 1733 aaKnown RBP-0.15□□□□□ -2.43
snR35snR35 PAI3P01094 68 aa-0.15□□□□□ -2.43
snR35snR35 IML1P47170 1584 aa-0.16□□□□□ -2.44
snR35snR35 TOR1P35169 2470 aa-0.16□□□□□ -2.44
snR35snR35 SPO14P36126 1683 aa-0.17□□□□□ -2.44
snR35snR35 ARO1P08566 1588 aaKnown RBP-0.17□□□□□ -2.44
snR35snR35 HAP1P0CE41 1502 aa-0.18□□□□□ -2.44
snR35snR35 DNF2Q12675 1612 aa-0.2□□□□□ -2.44
snR35snR35 RPS30AP0CX33 63 aaKnown RBP-0.21□□□□□ -2.44
snR35snR35 RPS30BP0CX34 63 aaKnown RBP-0.21□□□□□ -2.44
snR35snR35 YSY6P38374 65 aa-0.22□□□□□ -2.44
snR35snR35 IQG1Q12280 1495 aa-0.22□□□□□ -2.45
snR35snR35 FKS3Q04952 1785 aa-0.23□□□□□ -2.45
snR35snR35 YOL131WQ08270 108 aa-0.25□□□□□ -2.45
snR35snR35 SCC2Q04002 1493 aa-0.25□□□□□ -2.45
snR35snR35 RPS27BP38711 82 aa-0.26□□□□□ -2.45
snR35snR35 YBR230W-AQ3E762 66 aa-0.26□□□□□ -2.45
snR35snR35 RPO31P04051 1460 aa-0.29□□□□□ -2.46
snR35snR35 COA2Q3E823 68 aa-0.29□□□□□ -2.46
snR35snR35 YLR157W-DP0CE99 70 aa-0.31□□□□□ -2.46
snR35snR35 YIL102C-AQ2V2P5 75 aa-0.31□□□□□ -2.46
snR35snR35 YGR146C-AQ8TGT9 53 aa-0.31□□□□□ -2.46
snR35snR35 TCB3Q03640 1545 aaKnown RBP-0.32□□□□□ -2.46
snR35snR35 RRP5Q05022 1729 aaKnown RBP-0.32□□□□□ -2.46
snR35snR35 YLL006W-AQ3E814 58 aa-0.33□□□□□ -2.46
snR35snR35 VPS15P22219 1454 aa-0.34□□□□□ -2.46
snR35snR35 DNF1P32660 1571 aa-0.34□□□□□ -2.46
snR35snR35 YDR524C-BQ3E6R4 66 aa-0.34□□□□□ -2.46
snR35snR35 BCK1Q01389 1478 aa-0.35□□□□□ -2.46
snR35snR35 YGL258W-AQ3E740 77 aa-0.37□□□□□ -2.47
snR35snR35 YOL166W-AQ8TGJ1 51 aa-0.38□□□□□ -2.47
snR35snR35 MYO4P32492 1471 aa-0.38□□□□□ -2.47
snR35snR35 PDR15Q04182 1529 aaKnown RBP-0.38□□□□□ -2.47
snR35snR35 VMR1P38735 1592 aa-0.39□□□□□ -2.47
snR35snR35 PDR12Q02785 1511 aa-0.39□□□□□ -2.47
snR35snR35 YOR072W-BQ3E832 53 aa-0.47□□□□□ -2.48
snR35snR35 YHR050W-AQ05451 56 aa-0.5□□□□□ -2.49
snR35snR35 FMP27Q06179 2628 aa-0.52□□□□□ -2.49
snR35snR35 YPR117WQ06116 2489 aa-0.53□□□□□ -2.49
snR35snR35 VMA9Q3E7B6 73 aa-0.55□□□□□ -2.5
snR35snR35 SNQ2P32568 1501 aaKnown RBP-0.58□□□□□ -2.5
snR35snR35 TOR2P32600 2474 aaKnown RBP-0.59□□□□□ -2.5
snR35snR35 TY1B-DR4Q07793 1604 aa-0.6□□□□□ -2.51
snR35snR35 MEC1P38111 2368 aa-0.62□□□□□ -2.51
snR35snR35 YOR192C-CQ3E736 78 aa-0.62□□□□□ -2.51
snR35snR35 YFR010W-AP0C5N0 62 aa-0.65□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms