RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W SCP1Q08873 200 aa-2.27□□□□□ -2.77
RDS3YPR094W GNA1P43577 159 aaPredicted RBP-2.28□□□□□ -2.77
RDS3YPR094W YOS1Q3E834 85 aa-2.28□□□□□ -2.77
RDS3YPR094W SSK2P53599 1579 aa-2.28□□□□□ -2.77
RDS3YPR094W UBC4P15731 148 aa-2.29□□□□□ -2.78
RDS3YPR094W KSH1Q8TGJ3 72 aa-2.29□□□□□ -2.78
RDS3YPR094W TY3B-IQ7LHG5 1498 aaKnown RBP-2.29□□□□□ -2.78
RDS3YPR094W DNF2Q12675 1612 aa-2.3□□□□□ -2.78
RDS3YPR094W YDR034C-AP0C289 58 aa-2.3□□□□□ -2.78
RDS3YPR094W RPS27AP35997 82 aaKnown RBP-2.3□□□□□ -2.78
RDS3YPR094W RSM19P53733 91 aaPredicted RBP-2.31□□□□□ -2.78
RDS3YPR094W ESP1Q03018 1630 aa-2.32□□□□□ -2.78
RDS3YPR094W YOL097W-AQ3E7Y9 61 aa-2.33□□□□□ -2.78
RDS3YPR094W YOR394C-AQ8TGJ0 55 aa-2.33□□□□□ -2.78
RDS3YPR094W FPR2P32472 135 aa-2.34□□□□□ -2.78
RDS3YPR094W GDB1Q06625 1536 aa-2.34□□□□□ -2.78
RDS3YPR094W FKS3Q04952 1785 aa-2.34□□□□□ -2.78
RDS3YPR094W YDR042CQ03205 200 aa-2.35□□□□□ -2.79
RDS3YPR094W FLO1P32768 1537 aa-2.36□□□□□ -2.79
RDS3YPR094W VMA7P39111 118 aa-2.36□□□□□ -2.79
RDS3YPR094W DYN2Q02647 92 aa-2.36□□□□□ -2.79
RDS3YPR094W PAU23Q07987 124 aa-2.36□□□□□ -2.79
RDS3YPR094W PAU17Q12370 124 aa-2.36□□□□□ -2.79
RDS3YPR094W YOR093CQ12275 1648 aa-2.36□□□□□ -2.79
RDS3YPR094W HMRA1P0CY11 126 aa-2.37□□□□□ -2.79
RDS3YPR094W TIM12P32830 109 aa-2.37□□□□□ -2.79
RDS3YPR094W OLI1P61829 76 aa-2.37□□□□□ -2.79
RDS3YPR094W YMR103CQ04436 120 aa-2.37□□□□□ -2.79
RDS3YPR094W YGR146C-AQ8TGT9 53 aa-2.37□□□□□ -2.79
RDS3YPR094W POL1P13382 1468 aa-2.38□□□□□ -2.79
RDS3YPR094W SNU13P39990 126 aaKnown RBP-2.38□□□□□ -2.79
RDS3YPR094W GCN2P15442 1659 aa-2.38□□□□□ -2.79
RDS3YPR094W SIN3P22579 1536 aa-2.38□□□□□ -2.79
RDS3YPR094W POC4Q12245 148 aaPredicted RBP-2.39□□□□□ -2.79
RDS3YPR094W YLL066W-BQ8TGJ7 56 aa-2.39□□□□□ -2.79
RDS3YPR094W RPA190P10964 1664 aaKnown RBP-2.39□□□□□ -2.79
RDS3YPR094W TY3B-GQ99315 1547 aa-2.39□□□□□ -2.79
RDS3YPR094W UTP10P42945 1769 aaKnown RBP-2.4□□□□□ -2.79
RDS3YPR094W RPS30AP0CX33 63 aaKnown RBP-2.4□□□□□ -2.79
RDS3YPR094W RPS30BP0CX34 63 aaKnown RBP-2.4□□□□□ -2.79
RDS3YPR094W RPO31P04051 1460 aa-2.4□□□□□ -2.79
RDS3YPR094W NHP2P32495 156 aaPredicted RBP-2.41□□□□□ -2.8
RDS3YPR094W RRT15Q3E811 62 aa-2.41□□□□□ -2.8
RDS3YPR094W PDR11P40550 1411 aa-2.42□□□□□ -2.8
RDS3YPR094W XRN1P22147 1528 aaKnown RBP-2.42□□□□□ -2.8
RDS3YPR094W YBT1P32386 1661 aa-2.42□□□□□ -2.8
RDS3YPR094W SWR1Q05471 1514 aa-2.42□□□□□ -2.8
RDS3YPR094W SMC4Q12267 1418 aa-2.42□□□□□ -2.8
RDS3YPR094W NUP159P40477 1460 aa-2.43□□□□□ -2.8
RDS3YPR094W QCR6P00127 147 aa-2.43□□□□□ -2.8
RDS3YPR094W YER039C-AP0CD97 72 aa-2.43□□□□□ -2.8
RDS3YPR094W LHP1P33399 275 aaKnown RBP-2.43□□□□□ -2.8
RDS3YPR094W RPS27BP38711 82 aa-2.43□□□□□ -2.8
RDS3YPR094W YMR090WQ04304 227 aaKnown RBP-2.43□□□□□ -2.8
RDS3YPR094W FYV7Q12247 151 aa-2.43□□□□□ -2.8
RDS3YPR094W YKL068W-AQ3E826 78 aa-2.43□□□□□ -2.8
RDS3YPR094W NOP10Q6Q547 58 aaPredicted RBP-2.43□□□□□ -2.8
RDS3YPR094W SPP41P38904 1435 aa-2.43□□□□□ -2.8
RDS3YPR094W YPL225WQ08971 146 aaKnown RBP-2.44□□□□□ -2.8
RDS3YPR094W YIL156W-BQ2V2P4 73 aa-2.44□□□□□ -2.8
RDS3YPR094W SNQ2P32568 1501 aaKnown RBP-2.44□□□□□ -2.8
RDS3YPR094W DNF1P32660 1571 aa-2.44□□□□□ -2.8
RDS3YPR094W MDS3P53094 1487 aa-2.45□□□□□ -2.8
RDS3YPR094W LSM2P38203 95 aaKnown RBP-2.46□□□□□ -2.8
RDS3YPR094W CDC25P04821 1589 aa-2.46□□□□□ -2.8
RDS3YPR094W RRP5Q05022 1729 aaKnown RBP-2.48□□□□□ -2.81
RDS3YPR094W YOR316C-AQ3E806 69 aa-2.48□□□□□ -2.81
RDS3YPR094W YGR035W-AQ45U48 73 aa-2.49□□□□□ -2.81
RDS3YPR094W KOG1P38873 1557 aa-2.49□□□□□ -2.81
RDS3YPR094W RKR1Q04781 1562 aa-2.49□□□□□ -2.81
RDS3YPR094W YBR200W-AQ3E755 54 aa-2.5□□□□□ -2.81
RDS3YPR094W YJL133C-AQ3E7A3 74 aa-2.5□□□□□ -2.81
RDS3YPR094W YCF1P39109 1515 aaKnown RBP-2.51□□□□□ -2.81
RDS3YPR094W MHF2Q3E829 80 aa-2.51□□□□□ -2.81
RDS3YPR094W ESC1Q03661 1658 aaKnown RBP-2.51□□□□□ -2.81
RDS3YPR094W MLP1Q02455 1875 aaKnown RBP-2.52□□□□□ -2.81
RDS3YPR094W STU1P38198 1513 aa-2.52□□□□□ -2.81
RDS3YPR094W PDR12Q02785 1511 aa-2.52□□□□□ -2.81
RDS3YPR094W SPI1P40092 148 aa-2.53□□□□□ -2.81
RDS3YPR094W YLR146W-AQ2V2P1 62 aa-2.53□□□□□ -2.81
RDS3YPR094W SWM2P40342 146 aa-2.54□□□□□ -2.82
RDS3YPR094W IQG1Q12280 1495 aa-2.54□□□□□ -2.82
RDS3YPR094W YDL022C-AP0C5L6 82 aa-2.55□□□□□ -2.82
RDS3YPR094W GEA1P47102 1408 aaPredicted RBP-2.55□□□□□ -2.82
RDS3YPR094W TCB3Q03640 1545 aaKnown RBP-2.56□□□□□ -2.82
RDS3YPR094W YBR230W-AQ3E762 66 aa-2.56□□□□□ -2.82
RDS3YPR094W PDR5P33302 1511 aaKnown RBP-2.57□□□□□ -2.82
RDS3YPR094W YLR157W-DP0CE99 70 aa-2.57□□□□□ -2.82
RDS3YPR094W WIP1Q2V2P8 89 aa-2.57□□□□□ -2.82
RDS3YPR094W YOR011W-AQ3E807 68 aa-2.57□□□□□ -2.82
RDS3YPR094W HIR3P47171 1648 aa-2.57□□□□□ -2.82
RDS3YPR094W YGR121W-AQ3E816 71 aa-2.59□□□□□ -2.82
RDS3YPR094W TSC11P40061 1430 aa-2.59□□□□□ -2.82
RDS3YPR094W NUP192P47054 1683 aa-2.6□□□□□ -2.82
RDS3YPR094W ARO1P08566 1588 aaKnown RBP-2.6□□□□□ -2.83
RDS3YPR094W YKL065W-AQ2V2P2 73 aa-2.6□□□□□ -2.83
RDS3YPR094W YBL039W-BP0C268 59 aa-2.61□□□□□ -2.83
RDS3YPR094W SUS1Q6WNK7 96 aa-2.61□□□□□ -2.83
RDS3YPR094W SKI3P17883 1432 aaKnown RBP-2.61□□□□□ -2.83
RDS3YPR094W MSL1P40567 111 aaPredicted RBP-2.62□□□□□ -2.83
Retrieved 100 of 5,963 RNA–protein pairs in 109.3 ms