RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A TY2B-DR2Q03494 1770 aa0.89□□□□□ -2.27
SFT1YKL006C-A TY2B-OR1Q12113 1770 aa0.89□□□□□ -2.27
SFT1YKL006C-A TY2B-BQ12491 1770 aa0.89□□□□□ -2.27
SFT1YKL006C-A TY2B-OR2Q12501 1770 aa0.89□□□□□ -2.27
SFT1YKL006C-A UFD4P33202 1483 aa0.89□□□□□ -2.27
SFT1YKL006C-A BLM10P43583 2143 aa0.89□□□□□ -2.27
SFT1YKL006C-A YPR108W-AQ3E7B3 70 aa0.88□□□□□ -2.27
SFT1YKL006C-A YOL097W-AQ3E7Y9 61 aa0.88□□□□□ -2.27
SFT1YKL006C-A APC1P53886 1748 aa0.88□□□□□ -2.27
SFT1YKL006C-A TY2B-DR3Q07791 1770 aaKnown RBP0.88□□□□□ -2.27
SFT1YKL006C-A SCC2Q04002 1493 aa0.87□□□□□ -2.27
SFT1YKL006C-A PMD1P32634 1753 aa0.87□□□□□ -2.27
SFT1YKL006C-A DNF1P32660 1571 aa0.87□□□□□ -2.27
SFT1YKL006C-A ATX1P38636 73 aa0.86□□□□□ -2.27
SFT1YKL006C-A YOR032W-AQ8TGS1 66 aa0.86□□□□□ -2.27
SFT1YKL006C-A YKL018C-AQ3E7A7 99 aa0.85□□□□□ -2.27
SFT1YKL006C-A YFR009W-AP0C5M9 85 aa0.84□□□□□ -2.27
SFT1YKL006C-A RPS29BP41058 56 aaKnown RBP0.84□□□□□ -2.27
SFT1YKL006C-A ATP17Q06405 101 aa0.84□□□□□ -2.27
SFT1YKL006C-A YFL041W-AQ3E817 63 aa0.84□□□□□ -2.27
SFT1YKL006C-A ARO1P08566 1588 aaKnown RBP0.83□□□□□ -2.28
SFT1YKL006C-A YBR016WP38216 128 aa0.83□□□□□ -2.28
SFT1YKL006C-A RRP5Q05022 1729 aaKnown RBP0.82□□□□□ -2.28
SFT1YKL006C-A SSS1P35179 80 aa0.82□□□□□ -2.28
SFT1YKL006C-A YBR032WP38223 100 aa0.82□□□□□ -2.28
SFT1YKL006C-A PAU7P39545 55 aa0.82□□□□□ -2.28
SFT1YKL006C-A YIL134C-AQ45U18 67 aa0.82□□□□□ -2.28
SFT1YKL006C-A IML1P47170 1584 aa0.82□□□□□ -2.28
SFT1YKL006C-A ERI1P62651 68 aaKnown RBP0.81□□□□□ -2.28
SFT1YKL006C-A DNF2Q12675 1612 aa0.8□□□□□ -2.28
SFT1YKL006C-A SPI1P40092 148 aa0.8□□□□□ -2.28
SFT1YKL006C-A FKS3Q04952 1785 aa0.8□□□□□ -2.28
SFT1YKL006C-A EDC1P53080 175 aaPredicted RBP0.79□□□□□ -2.28
SFT1YKL006C-A PRP8P33334 2413 aaKnown RBP0.78□□□□□ -2.28
SFT1YKL006C-A VPS15P22219 1454 aa0.78□□□□□ -2.28
SFT1YKL006C-A MYO4P32492 1471 aa0.77□□□□□ -2.29
SFT1YKL006C-A SMC4Q12267 1418 aa0.76□□□□□ -2.29
SFT1YKL006C-A YLR146W-AQ2V2P1 62 aa0.76□□□□□ -2.29
SFT1YKL006C-A BPH1P25356 2167 aa0.76□□□□□ -2.29
SFT1YKL006C-A KOG1P38873 1557 aa0.75□□□□□ -2.29
SFT1YKL006C-A RPO31P04051 1460 aa0.75□□□□□ -2.29
SFT1YKL006C-A IQG1Q12280 1495 aa0.75□□□□□ -2.29
SFT1YKL006C-A YDR246W-AQ3E763 66 aa0.75□□□□□ -2.29
SFT1YKL006C-A IRC20Q06554 1556 aa0.74□□□□□ -2.29
SFT1YKL006C-A TY3B-GQ99315 1547 aa0.74□□□□□ -2.29
SFT1YKL006C-A YOL131WQ08270 108 aa0.73□□□□□ -2.29
SFT1YKL006C-A YSY6P38374 65 aa0.72□□□□□ -2.29
SFT1YKL006C-A YBL039W-BP0C268 59 aa0.71□□□□□ -2.3
SFT1YKL006C-A YBR200W-AQ3E755 54 aa0.71□□□□□ -2.3
SFT1YKL006C-A YFR010W-AP0C5N0 62 aa0.7□□□□□ -2.3
SFT1YKL006C-A RPS27AP35997 82 aaKnown RBP0.7□□□□□ -2.3
SFT1YKL006C-A YBL044WP38194 122 aa0.7□□□□□ -2.3
SFT1YKL006C-A YIL102C-AQ2V2P5 75 aa0.7□□□□□ -2.3
SFT1YKL006C-A HUB1Q6Q546 73 aa0.7□□□□□ -2.3
SFT1YKL006C-A RPS30AP0CX33 63 aaKnown RBP0.69□□□□□ -2.3
SFT1YKL006C-A RPS30BP0CX34 63 aaKnown RBP0.69□□□□□ -2.3
SFT1YKL006C-A YGR025WP53216 100 aa0.69□□□□□ -2.3
SFT1YKL006C-A YOR394C-AQ8TGJ0 55 aa0.68□□□□□ -2.3
SFT1YKL006C-A PDR12Q02785 1511 aa0.68□□□□□ -2.3
SFT1YKL006C-A RPO21P04050 1733 aaKnown RBP0.67□□□□□ -2.3
SFT1YKL006C-A MMS1Q06211 1407 aa0.67□□□□□ -2.3
SFT1YKL006C-A OLI1P61829 76 aa0.67□□□□□ -2.3
SFT1YKL006C-A YDR182W-AQ3E796 67 aa0.67□□□□□ -2.3
SFT1YKL006C-A YOR011W-AQ3E807 68 aa0.67□□□□□ -2.3
SFT1YKL006C-A VMR1P38735 1592 aa0.66□□□□□ -2.3
SFT1YKL006C-A HAP1P0CE41 1502 aa0.64□□□□□ -2.31
SFT1YKL006C-A SPO14P36126 1683 aa0.63□□□□□ -2.31
SFT1YKL006C-A BCK1Q01389 1478 aa0.63□□□□□ -2.31
SFT1YKL006C-A VMA9Q3E7B6 73 aa0.63□□□□□ -2.31
SFT1YKL006C-A YCR108CQ3E819 63 aa0.63□□□□□ -2.31
SFT1YKL006C-A VTH1P40438 1549 aa0.6□□□□□ -2.31
SFT1YKL006C-A VTH2P40890 1549 aa0.6□□□□□ -2.31
SFT1YKL006C-A SEN1Q00416 2231 aaKnown RBP0.6□□□□□ -2.31
SFT1YKL006C-A PDR15Q04182 1529 aaKnown RBP0.59□□□□□ -2.31
SFT1YKL006C-A SIP18P50263 79 aa0.59□□□□□ -2.31
SFT1YKL006C-A YOL166W-AQ8TGJ1 51 aa0.59□□□□□ -2.31
SFT1YKL006C-A YLR157W-DP0CE99 70 aa0.57□□□□□ -2.32
SFT1YKL006C-A YMR001C-AQ8TGS9 76 aa0.57□□□□□ -2.32
SFT1YKL006C-A PDR5P33302 1511 aaKnown RBP0.56□□□□□ -2.32
SFT1YKL006C-A CDC25P04821 1589 aa0.56□□□□□ -2.32
SFT1YKL006C-A YBT1P32386 1661 aa0.55□□□□□ -2.32
SFT1YKL006C-A RPS27BP38711 82 aa0.53□□□□□ -2.32
SFT1YKL006C-A TAO3P40468 2376 aa0.53□□□□□ -2.33
SFT1YKL006C-A TY1B-DR4Q07793 1604 aa0.52□□□□□ -2.33
SFT1YKL006C-A YCF1P39109 1515 aaKnown RBP0.51□□□□□ -2.33
SFT1YKL006C-A YOR008C-AQ3E7B9 74 aa0.51□□□□□ -2.33
SFT1YKL006C-A YOR192C-CQ3E736 78 aa0.49□□□□□ -2.33
SFT1YKL006C-A MON2P48563 1636 aaPredicted RBP0.49□□□□□ -2.33
SFT1YKL006C-A SPT6P23615 1451 aaKnown RBP0.48□□□□□ -2.33
SFT1YKL006C-A TOS6P48560 102 aa0.48□□□□□ -2.33
SFT1YKL006C-A YKL023C-AQ2V2P3 75 aa0.48□□□□□ -2.33
SFT1YKL006C-A YBR230W-AQ3E762 66 aa0.48□□□□□ -2.33
SFT1YKL006C-A NUP188P52593 1655 aaKnown RBP0.48□□□□□ -2.33
SFT1YKL006C-A YOR093CQ12275 1648 aa0.47□□□□□ -2.33
SFT1YKL006C-A SNQ2P32568 1501 aaKnown RBP0.46□□□□□ -2.34
SFT1YKL006C-A YGR146C-AQ8TGT9 53 aa0.43□□□□□ -2.34
SFT1YKL006C-A SSK2P53599 1579 aa0.41□□□□□ -2.34
SFT1YKL006C-A USO1P25386 1790 aa0.4□□□□□ -2.35
SFT1YKL006C-A RPS29AP41057 56 aaKnown RBP0.39□□□□□ -2.35
SFT1YKL006C-A ULS1Q08562 1619 aa0.36□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms