RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W XRN1P22147 1528 aaKnown RBP-0.55□□□□□ -2.5
CUL3YGR003W GEA1P47102 1408 aaPredicted RBP-0.55□□□□□ -2.5
CUL3YGR003W MMS1Q06211 1407 aa-0.55□□□□□ -2.5
CUL3YGR003W MHF2Q3E829 80 aa-0.55□□□□□ -2.5
CUL3YGR003W SPO14P36126 1683 aa-0.55□□□□□ -2.5
CUL3YGR003W HAP1P0CE41 1502 aa-0.56□□□□□ -2.5
CUL3YGR003W GDB1Q06625 1536 aa-0.56□□□□□ -2.5
CUL3YGR003W EDC1P53080 175 aaPredicted RBP-0.56□□□□□ -2.5
CUL3YGR003W Q0017Q9ZZX8 53 aa-0.56□□□□□ -2.5
CUL3YGR003W REV3P14284 1504 aa-0.56□□□□□ -2.5
CUL3YGR003W TRA1P38811 3744 aa-0.56□□□□□ -2.5
CUL3YGR003W YDL022C-AP0C5L6 82 aa-0.56□□□□□ -2.5
CUL3YGR003W YBR032WP38223 100 aa-0.56□□□□□ -2.5
CUL3YGR003W SUS1Q6WNK7 96 aa-0.56□□□□□ -2.5
CUL3YGR003W SSK2P53599 1579 aa-0.57□□□□□ -2.5
CUL3YGR003W YOR343CQ12484 108 aa-0.57□□□□□ -2.5
CUL3YGR003W SIN3P22579 1536 aa-0.57□□□□□ -2.5
CUL3YGR003W DNF2Q12675 1612 aa-0.58□□□□□ -2.5
CUL3YGR003W RPS27AP35997 82 aaKnown RBP-0.58□□□□□ -2.5
CUL3YGR003W GEA2P39993 1459 aaKnown RBP-0.58□□□□□ -2.5
CUL3YGR003W BCK1Q01389 1478 aa-0.58□□□□□ -2.5
CUL3YGR003W YPR145C-AQ2V2P0 78 aa-0.58□□□□□ -2.5
CUL3YGR003W YDR182W-AQ3E796 67 aa-0.58□□□□□ -2.5
CUL3YGR003W FIG2P25653 1609 aa-0.59□□□□□ -2.5
CUL3YGR003W SIP18P50263 79 aa-0.59□□□□□ -2.5
CUL3YGR003W YML054C-AQ3E809 52 aa-0.59□□□□□ -2.5
CUL3YGR003W SWR1Q05471 1514 aa-0.59□□□□□ -2.5
CUL3YGR003W YOR105WQ08504 108 aa-0.6□□□□□ -2.5
CUL3YGR003W YOR072W-BQ3E832 53 aa-0.6□□□□□ -2.5
CUL3YGR003W ULS1Q08562 1619 aa-0.6□□□□□ -2.51
CUL3YGR003W FLO1P32768 1537 aa-0.6□□□□□ -2.51
CUL3YGR003W RPO31P04051 1460 aa-0.6□□□□□ -2.51
CUL3YGR003W YOR093CQ12275 1648 aa-0.61□□□□□ -2.51
CUL3YGR003W NUP192P47054 1683 aa-0.61□□□□□ -2.51
CUL3YGR003W YMR082CQ04276 118 aa-0.61□□□□□ -2.51
CUL3YGR003W YCR075W-AQ3E830 75 aa-0.61□□□□□ -2.51
CUL3YGR003W YCL001W-BQ96VH2 84 aa-0.61□□□□□ -2.51
CUL3YGR003W VTH1P40438 1549 aa-0.62□□□□□ -2.51
CUL3YGR003W VTH2P40890 1549 aa-0.62□□□□□ -2.51
CUL3YGR003W YOR192C-CQ3E736 78 aa-0.62□□□□□ -2.51
CUL3YGR003W YMR175W-AQ3E766 64 aa-0.62□□□□□ -2.51
CUL3YGR003W YKL018C-AQ3E7A7 99 aa-0.62□□□□□ -2.51
CUL3YGR003W YOL097W-AQ3E7Y9 61 aa-0.62□□□□□ -2.51
CUL3YGR003W YOR032W-AQ8TGS1 66 aa-0.62□□□□□ -2.51
CUL3YGR003W YSP2Q06681 1438 aa-0.62□□□□□ -2.51
CUL3YGR003W IRC20Q06554 1556 aa-0.62□□□□□ -2.51
CUL3YGR003W YLR146W-AQ2V2P1 62 aa-0.62□□□□□ -2.51
CUL3YGR003W SMC4Q12267 1418 aa-0.63□□□□□ -2.51
CUL3YGR003W CDC25P04821 1589 aa-0.63□□□□□ -2.51
CUL3YGR003W SNQ2P32568 1501 aaKnown RBP-0.63□□□□□ -2.51
CUL3YGR003W YHR073W-AP0C5N7 58 aa-0.63□□□□□ -2.51
CUL3YGR003W TOS6P48560 102 aa-0.63□□□□□ -2.51
CUL3YGR003W YGL194C-AQ2V2P6 80 aa-0.63□□□□□ -2.51
CUL3YGR003W TCB3Q03640 1545 aaKnown RBP-0.63□□□□□ -2.51
CUL3YGR003W ZEO1Q08245 113 aa-0.64□□□□□ -2.51
CUL3YGR003W YBT1P32386 1661 aa-0.64□□□□□ -2.51
CUL3YGR003W PDR5P33302 1511 aaKnown RBP-0.64□□□□□ -2.51
CUL3YGR003W ESP1Q03018 1630 aa-0.64□□□□□ -2.51
CUL3YGR003W YDR119W-AQ2V2P9 66 aa-0.64□□□□□ -2.51
CUL3YGR003W YDR524C-BQ3E6R4 66 aa-0.64□□□□□ -2.51
CUL3YGR003W YOR008C-AQ3E7B9 74 aa-0.64□□□□□ -2.51
CUL3YGR003W COA2Q3E823 68 aa-0.64□□□□□ -2.51
CUL3YGR003W PDR12Q02785 1511 aa-0.64□□□□□ -2.51
CUL3YGR003W MDS3P53094 1487 aa-0.64□□□□□ -2.51
CUL3YGR003W ARO1P08566 1588 aaKnown RBP-0.64□□□□□ -2.51
CUL3YGR003W RKR1Q04781 1562 aa-0.64□□□□□ -2.51
CUL3YGR003W VPS15P22219 1454 aa-0.65□□□□□ -2.51
CUL3YGR003W IML1P47170 1584 aa-0.65□□□□□ -2.51
CUL3YGR003W TY3B-GQ99315 1547 aa-0.65□□□□□ -2.51
CUL3YGR003W YGR035W-AQ45U48 73 aa-0.65□□□□□ -2.51
CUL3YGR003W FKS3Q04952 1785 aa-0.65□□□□□ -2.51
CUL3YGR003W APC1P53886 1748 aa-0.66□□□□□ -2.51
CUL3YGR003W CWP2P43497 92 aa-0.66□□□□□ -2.51
CUL3YGR003W YOR314WQ12506 109 aa-0.66□□□□□ -2.51
CUL3YGR003W NUP159P40477 1460 aa-0.66□□□□□ -2.52
CUL3YGR003W POC4Q12245 148 aaPredicted RBP-0.66□□□□□ -2.52
CUL3YGR003W YBR200W-AQ3E755 54 aa-0.66□□□□□ -2.52
CUL3YGR003W STU1P38198 1513 aa-0.67□□□□□ -2.52
CUL3YGR003W YCF1P39109 1515 aaKnown RBP-0.67□□□□□ -2.52
CUL3YGR003W LTE1P07866 1435 aa-0.67□□□□□ -2.52
CUL3YGR003W DNF1P32660 1571 aa-0.67□□□□□ -2.52
CUL3YGR003W OLI1P61829 76 aa-0.67□□□□□ -2.52
CUL3YGR003W YGL258W-AQ3E740 77 aa-0.67□□□□□ -2.52
CUL3YGR003W YOR394C-AQ8TGJ0 55 aa-0.67□□□□□ -2.52
CUL3YGR003W GCN2P15442 1659 aa-0.68□□□□□ -2.52
CUL3YGR003W RPL29P05747 59 aaPredicted RBP-0.68□□□□□ -2.52
CUL3YGR003W YDR034W-BQ6Q5X2 51 aa-0.68□□□□□ -2.52
CUL3YGR003W YLL066W-BQ8TGJ7 56 aa-0.68□□□□□ -2.52
CUL3YGR003W VPS13Q07878 3144 aa-0.68□□□□□ -2.52
CUL3YGR003W YPL225WQ08971 146 aaKnown RBP-0.68□□□□□ -2.52
CUL3YGR003W YLL006W-AQ3E814 58 aa-0.68□□□□□ -2.52
CUL3YGR003W YKL068W-AQ3E826 78 aa-0.68□□□□□ -2.52
CUL3YGR003W NUP188P52593 1655 aaKnown RBP-0.68□□□□□ -2.52
CUL3YGR003W MLP1Q02455 1875 aaKnown RBP-0.69□□□□□ -2.52
CUL3YGR003W RRP5Q05022 1729 aaKnown RBP-0.69□□□□□ -2.52
CUL3YGR003W YGR121W-AQ3E816 71 aa-0.69□□□□□ -2.52
CUL3YGR003W Q0297Q9ZZV8 51 aa-0.69□□□□□ -2.52
CUL3YGR003W CHC1P22137 1653 aaKnown RBP-0.69□□□□□ -2.52
CUL3YGR003W SKI3P17883 1432 aaKnown RBP-0.69□□□□□ -2.52
CUL3YGR003W YBL039W-BP0C268 59 aa-0.69□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms