RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 PGM2Q96G03 612 aa15.18■□□□□ 0.02
CHD1L-211ENST00000639534 DDX23Q9BUQ8 820 aaKnown RBP15.18■□□□□ 0.02
CHD1L-211ENST00000639534 CALN1Q9BXU9 219 aa15.18■□□□□ 0.02
CHD1L-211ENST00000639534 AGO3Q9H9G7 860 aaKnown RBP15.18■□□□□ 0.02
CHD1L-211ENST00000639534 DDX43Q9NXZ2 648 aaKnown RBP15.18■□□□□ 0.02
CHD1L-211ENST00000639534 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHD1L-211ENST00000639534 TPX2Q9ULW0 747 aaKnown RBP15.18■□□□□ 0.02
CHD1L-211ENST00000639534 SCN1AP35498 2009 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 CFAP69A5D8W1 941 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 SGK1O00141 431 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 TULP2O00295 520 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 RIPK2O43353 540 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 DAB1O75553 588 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 FAM200BP0CF97 657 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 GHRP10912 638 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 ODC1P11926 461 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 TGM2P21980 687 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 STIP1P31948 543 aaKnown RBP15.17■□□□□ 0.02
CHD1L-211ENST00000639534 MAP2K2P36507 400 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 SCNN1GP51170 649 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 OTUD4Q01804 1114 aaKnown RBP15.17■□□□□ 0.02
CHD1L-211ENST00000639534 KCNT1Q5JUK3 1230 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 WSCD1Q658N2 575 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 TRNP1Q6NT89 227 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 CCDC25Q86WR0 208 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 ZCCHC9Q8N567 271 aaKnown RBP15.17■□□□□ 0.02
CHD1L-211ENST00000639534 SLAIN1Q8ND83 568 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 ACTL9Q8TC94 416 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 CD99L2Q8TCZ2 262 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 RSAD2Q8WXG1 361 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 KHSRPQ92945 711 aaKnown RBP eCLIP15.17■□□□□ 0.028e-10■■■■■ 27.3
CHD1L-211ENST00000639534 ACSF2Q96CM8 615 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-211ENST00000639534 CFAP57Q96MR6 1250 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 TTC25Q96NG3 672 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 SYT15Q9BQS2 421 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 ZNF670Q9BS34 389 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 MED10Q9BTT4 135 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 CAPS2Q9BXY5 557 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 LRRC4Q9HBW1 653 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 NGRNQ9NPE2 291 aaKnown RBP15.17■□□□□ 0.02
CHD1L-211ENST00000639534 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHD1L-211ENST00000639534 RNF19AQ9NV58 838 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 SHOC2Q9UQ13 582 aa15.17■□□□□ 0.02
CHD1L-211ENST00000639534 TRIP11Q15643 1979 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 SRRM3A6NNA2 597 aaPredicted RBP15.16■□□□□ 0.02
CHD1L-211ENST00000639534 PIK3R2O00459 728 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 ZNF189O75820 626 aaPredicted RBP15.16■□□□□ 0.02
CHD1L-211ENST00000639534 EOMESO95936 686 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 CYP11A1P05108 521 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 IVLP07476 585 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 LCP1P13796 627 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 ATP5DP30049 168 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 ACTN2P35609 894 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 MATKP42679 507 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 CLCNKBP51801 687 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 TUSC3Q13454 348 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 DPYSL3Q14195 570 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 SLC29A2Q14542 456 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 TRIP13Q15645 432 aaPredicted RBP15.16■□□□□ 0.02
CHD1L-211ENST00000639534 UPP1Q16831 310 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 C15orf59Q2T9L4 293 aaPredicted RBP15.16■□□□□ 0.02
CHD1L-211ENST00000639534 P3H1Q32P28 736 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 ERMARDQ5T6L9 678 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 ZNF618Q5T7W0 954 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 SCYL2Q6P3W7 929 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 C4orf22Q6V702 233 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 CYP4V2Q6ZWL3 525 aaPredicted RBP15.16■□□□□ 0.02
CHD1L-211ENST00000639534 FUKQ8N0W3 1084 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 SIX6OS1Q8N1H7 587 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 OR2W6PQ8NHA6 318 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 RNF157Q96PX1 679 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 PEBP4Q96S96 227 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 ADAM2Q99965 735 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 CCDC77Q9BR77 488 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 C11orf84Q9BUA3 381 aaPredicted RBP15.16■□□□□ 0.02
CHD1L-211ENST00000639534 EPB41L4BQ9H329 900 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 CENPHQ9H3R5 247 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 SEMA4AQ9H3S1 761 aa15.16■□□□□ 0.02
CHD1L-211ENST00000639534 CNOT10Q9H9A5 744 aaKnown RBP15.16■□□□□ 0.02
CHD1L-211ENST00000639534 APOL1O14791 398 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 TP73O15350 636 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 GRAP2O75791 330 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 GABBR2O75899 941 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 TTC4O95801 387 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 AGTP01019 485 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 ABHD2P08910 425 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 EIF3EP60228 445 aaKnown RBP15.15■□□□□ 0.02
CHD1L-211ENST00000639534 DYNLT1P63172 113 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 MRPS5P82675 430 aaKnown RBP15.15■□□□□ 0.02
CHD1L-211ENST00000639534 ATP11AP98196 1134 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 GPS1Q13098 491 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 NOMO1Q15155 1222 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 MAPRE1Q15691 268 aaKnown RBP15.15■□□□□ 0.02
CHD1L-211ENST00000639534 CDO1Q16878 200 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 MDH1BQ5I0G3 518 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 KCTD16Q68DU8 428 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 PIGZQ86VD9 579 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 ECHDC2Q86YB7 292 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 SLC43A3Q8NBI5 491 aa15.15■□□□□ 0.02
CHD1L-211ENST00000639534 P3H4Q92791 437 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms