RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 HIST1H2AJQ99878 128 aa10.6□□□□□ -0.71
SRGAP2-217ENST00000624873 H2AFJQ9BTM1 129 aa10.6□□□□□ -0.71
SRGAP2-217ENST00000624873 C11orf84Q9BUA3 381 aaPredicted RBP10.6□□□□□ -0.71
SRGAP2-217ENST00000624873 FRMD8Q9BZ67 464 aaPredicted RBP10.6□□□□□ -0.71
SRGAP2-217ENST00000624873 FOXP3Q9BZS1 431 aa10.6□□□□□ -0.71
SRGAP2-217ENST00000624873 ARHGAP28Q9P2N2 729 aa10.6□□□□□ -0.71
SRGAP2-217ENST00000624873 ASTN1O14525 1302 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 CBX4O00257 560 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ATP8B1O43520 1251 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 B4GALT4O60513 344 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 FGF19O95750 216 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ATP5BP06576 529 aaKnown RBP10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 POU5F1BQ06416 359 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 MCL1Q07820 350 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ATAT1Q5SQI0 421 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 RASSF3Q86WH2 238 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 TBC1D19Q8N5T2 526 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 LZTR1Q8N653 840 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 SLC20A1Q8WUM9 679 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 SLC7A5P2Q9GIP4 190 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 AIPL1Q9NZN9 384 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 HACD3Q9P035 362 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ZNF536O15090 1300 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ABHD14A-ACY1A0A1B0GW23 586 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 KLRC4O43908 158 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 TSPAN1O60635 241 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 RAMP2O60895 175 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ITIH2P19823 946 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 MAP4P27816 1152 aaKnown RBP10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 CDC25CP30307 473 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 CHKAP35790 457 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 MRPS25P82663 173 aaKnown RBP10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 MMEL1Q495T6 779 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ATG16L1Q676U5 607 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 KCTD16Q68DU8 428 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 TBC1D1Q86TI0 1168 aaPredicted RBP10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 SCUBE3Q8IX30 993 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 MCOLN2Q8IZK6 566 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 DEFB106AQ8N104 65 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 TPCN2Q8NHX9 752 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 TMEM161AQ9NX61 479 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 GABRQQ9UN88 632 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 PRR23AA6NEV1 266 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ZNF263O14978 683 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ZBTB22O15209 634 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 TYK2P29597 1187 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 BRCC3P46736 316 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 RENBPP51606 427 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 GJA9P57773 515 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 CBWD6Q4V339 395 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 CBWD3Q5JTY5 395 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 CBWD5Q5RIA9 395 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 LLGL2Q6P1M3 1020 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 FOXR2Q6PJQ5 311 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 RBM23Q86U06 439 aaKnown RBP10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 NUP93Q8N1F7 819 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 SLC25A41Q8N5S1 370 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ST6GALNAC4Q9H4F1 302 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 AAR2Q9Y312 384 aaKnown RBP10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 PMPCBO75439 489 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 C22orf31O95567 290 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 USP17L7P0C7H9 530 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 FDFT1P37268 417 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ARL4DP49703 201 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ARSHQ5FYA8 562 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 SCLYQ96I15 445 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 ZSWIM1Q9BR11 485 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 SYNDIG1Q9H7V2 258 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 AFF4Q9UHB7 1163 aaKnown RBP10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 DNMT3LQ9UJW3 386 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 TPX2Q9ULW0 747 aaKnown RBP10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 VPS9D1Q9Y2B5 631 aa10.59□□□□□ -0.71
SRGAP2-217ENST00000624873 C2orf81A6NN90 581 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 PLEKP08567 350 aaPredicted RBP10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 TFDP3Q5H9I0 405 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 C9orf57Q5W0N0 161 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 ZNF571Q7Z3V5 609 aaPredicted RBP10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 GPATCH11Q8N954 259 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 ANKRD52Q8NB46 1076 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 NUP98P52948 1817 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 PFKMP08237 780 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 PMS2P54278 862 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 COPS2P61201 443 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 GNGT1P63211 74 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 IRX4P78413 519 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 MDM2Q00987 491 aaPredicted RBP10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 COL9A3Q14050 684 aaPredicted RBP10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 ACAP1Q15027 740 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 ECM1Q16610 540 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 KCNT1Q5JUK3 1230 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 ERMARDQ5T6L9 678 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 MEI1Q5TIA1 1274 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 OR5B17Q8NGF7 314 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 PTPRN2Q92932 1015 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 TSPAN17Q96FV3 270 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 CYTH2Q99418 400 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 CENPKQ9BS16 269 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 CRLS1Q9UJA2 301 aa10.58□□□□□ -0.72
SRGAP2-217ENST00000624873 ADAM28Q9UKQ2 775 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms