RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ATRIPQ8WXE1 791 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 MYEOVQ96EZ4 313 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 C17orf80Q9BSJ5 609 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 BDH2Q9BUT1 245 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 VN1R3Q9BXE9 311 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 TPSD1Q9BZJ3 242 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 KLC2Q9H0B6 622 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 PARPBPQ9NWS1 579 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 CEP72Q9P209 647 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 RIMKLBQ9ULI2 386 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 A0A1B0GVC2 190 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 RRN3P2A6NIE6 340 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 TMEM200CA6NKL6 621 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 ZAR1LA6NP61 321 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 BTBD11A6QL63 1104 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 PPM1DO15297 605 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 CBFA2T3O75081 653 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 AGR2O95994 175 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 PYGLP06737 847 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 SRGNP10124 158 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 LAG3P18627 525 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 HOXA5P20719 270 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 NR4A1P22736 598 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 KLRK1P26718 216 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 MTHFSP49914 203 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 ATXN1P54253 815 aaKnown RBP5.67□□□□□ -1.5
CPNE3-213ENST00000622183 SLC25A3Q00325 362 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 SP2Q02086 613 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 GRM4Q14833 912 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 JAKMIP3Q5VZ66 844 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 RAB11FIP2Q7L804 512 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 DTX2Q86UW9 622 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 TTC30AQ86WT1 665 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 FTSJ3Q8IY81 847 aaKnown RBP5.67□□□□□ -1.5
CPNE3-213ENST00000622183 SCAMP5Q8TAC9 235 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 IL17DQ8TAD2 202 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 SLC30A5Q8TAD4 765 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 SUN3Q8TAQ9 357 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 WDR60Q8WVS4 1066 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 SDCCAG3Q96C92 435 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 PYM1Q9BRP8 204 aaKnown RBP5.67□□□□□ -1.5
CPNE3-213ENST00000622183 TRIM36Q9NQ86 728 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 FSCN3Q9NQT6 498 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 PNMA2Q9UL42 364 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 DAPP1Q9UN19 280 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 USP22Q9UPT9 525 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 SLC27A6Q9Y2P4 619 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 TESMINQ9Y4I5 508 aa5.67□□□□□ -1.5
CPNE3-213ENST00000622183 PNMA6EA0A0J9YXQ4 647 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 FAM90A18PA6NE21 464 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 FAM90A16PA6NEW6 464 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 FAM90A9PA6NNJ1 464 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 FAM90A5PA8MXJ8 464 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 B9A039 149 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 K7ESM1 405 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 MUSKO15146 869 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 TAF5LO75529 589 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 SPDEFO95238 335 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 FAM90A15PP0C7V4 464 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 FAM90A14PP0C7W9 464 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 PPP3CBP16298 524 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 ZEB1P37275 1124 aaPredicted RBP5.66□□□□□ -1.5
CPNE3-213ENST00000622183 HNRNPMP52272 730 aaKnown RBP eCLIP5.66□□□□□ -1.5
CPNE3-213ENST00000622183 TIRAPP58753 221 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 ADAM17P78536 824 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 ITIH3Q06033 890 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 NFIXQ14938 502 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 LY6KQ17RY6 165 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 RINT1Q6NUQ1 792 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 NFRKBQ6P4R8 1299 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 CLEC9AQ6UXN8 241 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 HERC6Q8IVU3 1022 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 CLASRPQ8N2M8 674 aaKnown RBP5.66□□□□□ -1.5
CPNE3-213ENST00000622183 B3GALNT2Q8NCR0 500 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 CHST13Q8NET6 341 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 TWSG1Q9GZX9 223 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 SEPSECSQ9HD40 501 aaKnown RBP5.66□□□□□ -1.5
CPNE3-213ENST00000622183 FEM1BQ9UK73 627 aa5.66□□□□□ -1.5
CPNE3-213ENST00000622183 DRG1Q9Y295 367 aaKnown RBP5.66□□□□□ -1.5
CPNE3-213ENST00000622183 H0Y3Z8 333 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 PROM1O43490 865 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 LMNAP02545 664 aaKnown RBP5.65□□□□□ -1.5
CPNE3-213ENST00000622183 PDHA1P08559 390 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 CKMT1AP12532 417 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 AKT1P31749 480 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 PRKAA2P54646 552 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 GUCY1B3Q02153 619 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 CUL4BQ13620 913 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 CSHL1Q14406 222 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 ACOX1Q15067 660 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 SLC9A4Q6AI14 798 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 TMED8Q6PL24 325 aaPredicted RBP5.65□□□□□ -1.5
CPNE3-213ENST00000622183 LRRTM4Q86VH4 590 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 C2CD5Q86YS7 1000 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 LNX2Q8N448 690 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 FSTL5Q8N475 847 aaPredicted RBP5.65□□□□□ -1.5
CPNE3-213ENST00000622183 METTL25Q8N6Q8 603 aa5.65□□□□□ -1.5
CPNE3-213ENST00000622183 OR6Y1Q8NGX8 325 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms