RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 SCAMP5Q8TAC9 235 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 IFI44Q8TCB0 444 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 BRIX1Q8TDN6 353 aaKnown RBP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 IPCEF1Q8WWN9 437 aaPredicted RBP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 CFHR4Q92496 578 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 SH3KBP1Q96B97 665 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 SDCCAG3Q96C92 435 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 LRRC46Q96FV0 321 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 WRNIP1Q96S55 665 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 TMEM209Q96SK2 561 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 MRPL9Q9BYD2 267 aaKnown RBP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 GPR63Q9BZJ6 419 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 TWSG1Q9GZX9 223 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 CHST8Q9H2A9 424 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 MRPL46Q9H2W6 279 aaKnown RBP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 RNPEPQ9H4A4 650 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 MTG2Q9H4K7 406 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 KRT84Q9NSB2 600 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 ARGLU1Q9NWB6 273 aaPredicted RBP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 USP6P35125 1406 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 ITSN1Q15811 1721 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 COL18A1P39060 1754 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 LRRC37A3O60309 1634 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 IRS2Q9Y4H2 1338 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 GTPBP10A4D1E9 387 aaKnown RBP4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 HMX3A6NHT5 357 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 C19orf81C9J6K1 198 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 K7ESM1 405 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 BTN3A1O00481 513 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 KCNQ3O43525 872 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 ACTL6BO94805 426 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 SEC24DO94855 1032 aaPredicted RBP4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 FSBPO95073 299 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 MLYCDO95822 493 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 AHSGP02765 367 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 TK1P04183 234 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 PRKCBP05771 671 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 APOA4P06727 396 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 ITGA2BP08514 1039 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 FTH1P19P0C7X4 201 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 MUTP22033 750 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 CHMP24386 653 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 PSMA3P25788 255 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 THBS2P35442 1172 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 CARSP49589 748 aaKnown RBP4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 SESN2P58004 480 aaPredicted RBP4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 ACTR2P61160 394 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 IFI35P80217 286 aaPredicted RBP4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 GRIN1Q05586 938 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 RAB39AQ14964 217 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 FLYWCH1Q4VC44 716 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 EMC10Q5UCC4 262 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 SNX30Q5VWJ9 437 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 ARL6IP4Q66PJ3 421 aaKnown RBP4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 VASNQ6EMK4 673 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 NFRKBQ6P4R8 1299 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 TMTC3Q6ZXV5 915 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 ARHGEF25Q86VW2 580 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 CHD1LQ86WJ1 897 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 VSIG1Q86XK7 387 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 GALNT13Q8IUC8 556 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 CCDC117Q8IWD4 279 aaPredicted RBP4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 TP53I13Q8NBR0 393 aaPredicted RBP4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 IGDCC4Q8TDY8 1250 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 SNX27Q96L92 541 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 MPHOSPH9Q99550 1183 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 PRPF18Q99633 342 aaKnown RBP4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 ADPGKQ9BRR6 497 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 AMNQ9BXJ7 453 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 PRDM8Q9NQV8 689 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 DLL4Q9NR61 685 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 UCKL1Q9NWZ5 548 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 LPAR3Q9UBY5 353 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 FTSJ1Q9UET6 329 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 MED16Q9Y2X0 877 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 HS3ST4Q9Y661 456 aa4.33□□□□□ -1.72
IGHV3-29-201ENST00000604817 RGPD5Q99666 1765 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 TOPAZ1Q8N9V7 1692 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 CCDC7Q96M83 1385 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 PASKQ96RG2 1323 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 A0A0A6YYK5 440 aaPredicted RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 TRIM64A6NGJ6 449 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 TRIM64BA6NI03 449 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 ZNF839A8K0R7 811 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 FCHO1O14526 889 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 FFAR3O14843 346 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 SPTLC2O15270 562 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 TBC1D4O60343 1298 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 CYP7B1O75881 506 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 HSPA4LO95757 839 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 LRG1P02750 347 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 INSRRP14616 1297 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 NPPBP16860 134 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 RXRAP19793 462 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 TGM1P22735 817 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 AARSP49588 968 aaKnown RBP eCLIP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 CCT4P50991 539 aaKnown RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 SLURP1P55000 103 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 SOX8P57073 446 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms