RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SYT15Q9BQS2 421 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 TRAIPQ9BWF2 469 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.19□□□□□ -0.941e-6■■■□□ 18.8
SMAD4-206ENST00000588860 UBN1Q9NPG3 1134 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 DDX43Q9NXZ2 648 aaKnown RBP9.19□□□□□ -0.94
SMAD4-206ENST00000588860 ASIC3Q9UHC3 531 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 PHF24Q9UPV7 400 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 SQORQ9Y6N5 450 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 C3orf70A6NLC5 250 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-206ENST00000588860 CLDN5O00501 218 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 XPO1O14980 1071 aaKnown RBP9.18□□□□□ -0.94
SMAD4-206ENST00000588860 PAPSS1O43252 624 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-206ENST00000588860 OPA1O60313 960 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 GAS8O95995 478 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 ODC1P11926 461 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 COL9A1P20849 921 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 KDELR1P24390 212 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 IL1R2P27930 398 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 SDC4P31431 198 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 PCK1P35558 622 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 FLT3P36888 993 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 ACADSBP45954 432 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 DRG2P55039 364 aaKnown RBP9.18□□□□□ -0.94
SMAD4-206ENST00000588860 PLTPP55058 493 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 SLC8A3P57103 927 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 MTMR3Q13615 1198 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 TAF5Q15542 800 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 CCNG2Q16589 344 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 UPP1Q16831 310 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 CDO1Q16878 200 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 CCDC142Q17RM4 750 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 CCDC14Q49A88 953 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 KCNT1Q5JUK3 1230 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 TRAF7Q6Q0C0 670 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 ZDHHC24Q6UX98 284 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 METTL23Q86XA0 190 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMAD4-206ENST00000588860 SCUBE3Q8IX30 993 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 GOLGA6L1Q8N7Z2 621 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 SLC43A3Q8NBI5 491 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 KCTD6Q8NC69 237 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 C3orf58Q8NDZ4 430 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 TET1Q8NFU7 2136 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 SH3TC2Q8TF17 1288 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 CLEC4CQ8WTT0 213 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 UBLCP1Q8WVY7 318 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-206ENST00000588860 ZNF333Q96JL9 665 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 CFAP57Q96MR6 1250 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 ZIM3Q96PE6 472 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 PEBP4Q96S96 227 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 FMO2Q99518 471 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 HNRNPABQ99729 332 aaKnown RBP9.18□□□□□ -0.94
SMAD4-206ENST00000588860 PAAF1Q9BRP4 392 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 B3GNT5Q9BYG0 378 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 NGRNQ9NPE2 291 aaKnown RBP9.18□□□□□ -0.94
SMAD4-206ENST00000588860 CYLDQ9NQC7 956 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 ZDHHC18Q9NUE0 388 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 GRHL1Q9NZI5 618 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 VPS18Q9P253 973 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 USP18Q9UMW8 372 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 FAN1Q9Y2M0 1017 aa9.18□□□□□ -0.94
SMAD4-206ENST00000588860 TIMM13Q9Y5L4 95 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-206ENST00000588860 I3L4J1 428 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 AGPSO00116 658 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 ARVCFO00192 962 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 GABRDO14764 452 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 LIASO43766 372 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 PRPSAP2O60256 369 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 RNF40O75150 1001 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 SYF2O95926 243 aaKnown RBP9.17□□□□□ -0.94
SMAD4-206ENST00000588860 FAM200BP0CF97 657 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 ATF2P15336 505 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 NPR3P17342 541 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 HSD17B3P37058 310 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 SCNN1AP37088 669 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 LHX1P48742 406 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 DYNLT1P63172 113 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 ATP11AP98196 1134 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 LMNB2Q03252 620 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 GABPB1Q06547 395 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-206ENST00000588860 DHX9Q08211 1270 aaKnown RBP9.17□□□□□ -0.94
SMAD4-206ENST00000588860 ADCY2Q08462 1091 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 ADIGQ0VDE8 80 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 CALCOCO2Q13137 446 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 TUSC3Q13454 348 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 KRT81Q14533 505 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 MBTPS1Q14703 1052 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 TRIP13Q15645 432 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-206ENST00000588860 PAN2Q504Q3 1202 aaKnown RBP9.17□□□□□ -0.94
SMAD4-206ENST00000588860 TIGD5Q53EQ6 642 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 RAB6CQ53S08 254 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 SH3PXD2AQ5TCZ1 1133 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 SCYL2Q6P3W7 929 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 ZNF365Q70YC5 407 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 GSTA5Q7RTV2 222 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 TMC3Q7Z5M5 1100 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 ZNF598Q86UK7 904 aaKnown RBP9.17□□□□□ -0.94
SMAD4-206ENST00000588860 RFX6Q8HWS3 928 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 FUKQ8N0W3 1084 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 DEFB123Q8N688 67 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms