RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 SPG21Q9NZD8 308 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 MTRRQ9UBK8 725 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 BACE2Q9Y5Z0 518 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 NLRC5Q86WI3 1866 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 TRIM66O15016 1216 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 SYN1P17600 705 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 CYP2F1P24903 491 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 GJC1P36383 396 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 NDUFV1P49821 464 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 EPHB4P54760 987 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 YWHAZP63104 245 aaKnown RBP19.44■□□□□ 0.7
PRKCA-203ENST00000578063 SLC25A11Q02978 314 aaKnown RBP19.44■□□□□ 0.7
PRKCA-203ENST00000578063 C2orf54Q08AI8 447 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 LONRF2Q1L5Z9 754 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 KIAA1841Q6NSI8 718 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 ARFGAP1Q8N6T3 406 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 NOA1Q8NC60 698 aaKnown RBP19.44■□□□□ 0.7
PRKCA-203ENST00000578063 SPPL2BQ8TCT7 592 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 IRGQQ8WZA9 623 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 HERVK_113Q902F9 699 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 RBM41Q96IZ5 413 aaKnown RBP19.44■□□□□ 0.7
PRKCA-203ENST00000578063 CFAP57Q96MR6 1250 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 SLC9A7Q96T83 725 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 DDX23Q9BUQ8 820 aaKnown RBP19.44■□□□□ 0.7
PRKCA-203ENST00000578063 VN1R3Q9BXE9 311 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.44■□□□□ 0.7
PRKCA-203ENST00000578063 STK39Q9UEW8 545 aa19.44■□□□□ 0.7
PRKCA-203ENST00000578063 MKI67P46013 3256 aaKnown RBP19.43■□□□□ 0.7
PRKCA-203ENST00000578063 ZRANB2O95218 330 aaKnown RBP eCLIP19.43■□□□□ 0.72e-9■■■■■ 60.6
PRKCA-203ENST00000578063 ZBED1O96006 694 aa19.43■□□□□ 0.7
PRKCA-203ENST00000578063 CETN2P41208 172 aa19.43■□□□□ 0.7
PRKCA-203ENST00000578063 MATKP42679 507 aa19.43■□□□□ 0.7
PRKCA-203ENST00000578063 PSMD5Q16401 504 aa19.43■□□□□ 0.7
PRKCA-203ENST00000578063 MMGT1Q8N4V1 131 aa19.43■□□□□ 0.7
PRKCA-203ENST00000578063 RIN2Q8WYP3 895 aaPredicted RBP19.43■□□□□ 0.7
PRKCA-203ENST00000578063 C8orf48Q96LL4 319 aa19.43■□□□□ 0.7
PRKCA-203ENST00000578063 ZBED2Q9BTP6 218 aa19.43■□□□□ 0.7
PRKCA-203ENST00000578063 MTIF3Q9H2K0 278 aaKnown RBP19.43■□□□□ 0.7
PRKCA-203ENST00000578063 POPDC2Q9HBU9 364 aa19.43■□□□□ 0.7
PRKCA-203ENST00000578063 INSL6Q9Y581 213 aa19.43■□□□□ 0.7
PRKCA-203ENST00000578063 PTPRDP23468 1912 aa19.43■□□□□ 0.7
PRKCA-203ENST00000578063 CCDC188H7C350 402 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 KRIT1O00522 736 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 DYNC1I1O14576 645 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 TCF4P15884 667 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 MIPP30301 263 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 RABGGTBP53611 331 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 ELF2Q15723 593 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 C15orf59Q2T9L4 293 aaPredicted RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 PM20D1Q6GTS8 502 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 SLC8B1Q6J4K2 584 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 CCDC70Q6NSX1 233 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 PRSS55Q6UWB4 352 aaPredicted RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 FIBCD1Q8N539 461 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 PHOSPHO2Q8TCD6 241 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 FAM172AQ8WUF8 416 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 SLC2A13Q96QE2 648 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 LBHD1Q9BQE6 289 aaPredicted RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 C11orf84Q9BUA3 381 aaPredicted RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 TRIM62Q9BVG3 475 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 RBM12Q9NTZ6 932 aaKnown RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 CXXC1Q9P0U4 656 aaPredicted RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 ZMYND8Q9ULU4 1186 aaPredicted RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 STAP1Q9ULZ2 295 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 USP18Q9UMW8 372 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 PCDHB12Q9Y5F1 795 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 USP3Q9Y6I4 520 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 SLC4A7Q9Y6M7 1214 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 GOLGA6L10A0A0M3HER8 536 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 MTMR11A4FU01 709 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 KRT1P04264 644 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 NOS2P35228 1153 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 GLUD2P49448 558 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 SLC5A3P53794 718 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 ARPP19P56211 112 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 DSG1Q02413 1049 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 SMC1AQ14683 1233 aaKnown RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 CDO1Q16878 200 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 ODF2Q5BJF6 829 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 ZFYVE27Q5T4F4 411 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 AADACL2Q6P093 401 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 RSPO2Q6UXX9 243 aaPredicted RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 DDX53Q86TM3 631 aaKnown RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 SLC13A5Q86YT5 568 aaPredicted RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 CCDC50Q8IVM0 306 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 SCN4BQ8IWT1 228 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 RCOR2Q8IZ40 523 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 FBXO22Q8NEZ5 403 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 PGLYRP2Q96PD5 576 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 NGRNQ9NPE2 291 aaKnown RBP19.42■□□□□ 0.7
PRKCA-203ENST00000578063 CDY1Q9Y6F8 540 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 PTPRSQ13332 1948 aa19.42■□□□□ 0.7
PRKCA-203ENST00000578063 PRPSAP2O60256 369 aa19.41■□□□□ 0.7
PRKCA-203ENST00000578063 USP17L7P0C7H9 530 aa19.41■□□□□ 0.7
PRKCA-203ENST00000578063 COPS2P61201 443 aa19.41■□□□□ 0.7
PRKCA-203ENST00000578063 ATP11AP98196 1134 aa19.41■□□□□ 0.7
PRKCA-203ENST00000578063 NAA30Q147X3 362 aaPredicted RBP19.41■□□□□ 0.7
PRKCA-203ENST00000578063 STRADAQ7RTN6 431 aa19.41■□□□□ 0.7
PRKCA-203ENST00000578063 HERC6Q8IVU3 1022 aa19.41■□□□□ 0.7
PRKCA-203ENST00000578063 DEFB106AQ8N104 65 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms