RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TADA3O75528 432 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 ERLIN2O94905 339 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 ATP1A1P05023 1023 aaKnown RBP7.25□□□□□ -1.25
SLIRP-204ENST00000555890 PFKMP08237 780 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 MYL3P08590 195 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 CLTAP09496 248 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 TMEM253P0C7T8 217 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 PNMA6AP0CW24 399 aaPredicted RBP7.25□□□□□ -1.25
SLIRP-204ENST00000555890 GNAT1P11488 350 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 CYP2C9P11712 490 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 GZMAP12544 262 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 KRT5P13647 590 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 PROZP22891 400 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 PDE6CP51160 858 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 GALCP54803 685 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 WDR4P57081 412 aaKnown RBP7.25□□□□□ -1.25
SLIRP-204ENST00000555890 CHMP4BP1P59074 171 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 AMPD2Q01433 879 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 TRPC3Q13507 836 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 PCBP1Q15365 356 aaKnown RBP eCLIP7.25□□□□□ -1.25
SLIRP-204ENST00000555890 SGSM1Q2NKQ1 1148 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 ERCC6LQ2NKX8 1250 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 NFRKBQ6P4R8 1299 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 ZNF677Q86XU0 584 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 SYCE1Q8N0S2 351 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 SNIP1Q8TAD8 396 aaKnown RBP7.25□□□□□ -1.25
SLIRP-204ENST00000555890 LNX1Q8TBB1 728 aaPredicted RBP7.25□□□□□ -1.25
SLIRP-204ENST00000555890 CAGE1Q8TC20 777 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 UBE2Q2Q8WVN8 375 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 ANKRD7Q92527 254 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 RABGGTAQ92696 567 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 TAF4BQ92750 862 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 ANKRD36BP1Q96IX9 119 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 KREMEN1Q96MU8 473 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 ADPGKQ9BRR6 497 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 KATNAL1Q9BW62 490 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 GCOM2Q9BZD3 368 aaPredicted RBP7.25□□□□□ -1.25
SLIRP-204ENST00000555890 RPF1Q9H9Y2 349 aaKnown RBP7.25□□□□□ -1.25
SLIRP-204ENST00000555890 PTPRHQ9HD43 1115 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 TRMT13Q9NUP7 481 aaKnown RBP7.25□□□□□ -1.25
SLIRP-204ENST00000555890 SETD4Q9NVD3 440 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 ARGLU1Q9NWB6 273 aaPredicted RBP7.25□□□□□ -1.25
SLIRP-204ENST00000555890 RNF14Q9UBS8 474 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 GMEB2Q9UKD1 530 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 NENFQ9UMX5 172 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 SNX12Q9UMY4 172 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 HYOU1Q9Y4L1 999 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 ASXL3Q9C0F0 2248 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 CITO14578 2027 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 LINC01553A4QN01 128 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 ABLIM1O14639 778 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 CYP26A1O43174 497 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 PALMO75781 387 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 F2P00734 622 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 EDN1P05305 212 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 TUBBP07437 444 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 TMEM191BP0C7N4 346 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 SMIM10L2AP0DMW4 78 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 SMIM10L2BP0DMW5 78 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 TNFSF9P41273 254 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 PAFAH1B1P43034 410 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 YWHAEP62258 255 aaKnown RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 GPC5P78333 572 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 DEFB103AP81534 67 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 RBM10P98175 930 aaKnown RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 TFAMQ00059 246 aaKnown RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 CDR2Q01850 454 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 NFX1Q12986 1120 aaKnown RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 CUL2Q13617 745 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 GRM2Q14416 872 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 ELF2Q15723 593 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 SEZ6Q53EL9 994 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 ZBTB41Q5SVQ8 909 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 TEX35Q5T0J7 233 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 MARCH8Q5T0T0 291 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 CCDC181Q5TID7 509 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 TDRD10Q5VZ19 366 aaKnown RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 EEF1DP3Q658K8 133 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 LMBRD2Q68DH5 695 aaPredicted RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 CCDC70Q6NSX1 233 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 PPP1R2P3Q6NXS1 205 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 RSRC2Q7L4I2 434 aaKnown RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 CD302Q8IX05 232 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 RHOT2Q8IXI1 618 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 THNSL1Q8IYQ7 743 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 KIAA0319LQ8IZA0 1049 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 PDCL2Q8N4E4 241 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 LSM14AQ8ND56 463 aaKnown RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 HNRNPLLQ8WVV9 542 aaKnown RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 RFFLQ8WZ73 363 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 KAT5Q92993 513 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 ZNF668Q96K58 619 aaPredicted RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 SYT11Q9BT88 431 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 PI4K2AQ9BTU6 479 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 PACSIN1Q9BY11 444 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 CDT1Q9H211 546 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 PDCL3Q9H2J4 239 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 MINDY3Q9H8M7 445 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 IFT122Q9HBG6 1241 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 SPC25Q9HBM1 224 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms