RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 GSTA5Q7RTV2 222 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 ZNF598Q86UK7 904 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 EIF1ADQ8N9N8 165 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 SLAIN1Q8ND83 568 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 ATL2Q8NHH9 583 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 MAIP1Q8WWC4 291 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 PCED1BQ96HM7 432 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 HNRNPABQ99729 332 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 EPB41L4BQ9H329 900 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 MED4Q9NPJ6 270 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 SYNJ2BP-COX16A0A087WUM0 186 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 SETSIPP0DME0 302 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 CDH6P55285 790 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 BYSLQ13895 437 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 SKIDA1Q1XH10 827 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 DNAJC21Q5F1R6 531 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 CLLU1OSQ5K130 101 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 HFE2Q6ZVN8 426 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 RFX6Q8HWS3 928 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 RUFY1Q96T51 708 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 SH3GL2Q99962 352 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 DUSP16Q9BY84 665 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 TXLNGYQ9BZA5 131 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 TMPRSS4Q9NRS4 437 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 COX16Q9P0S2 106 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 ADAM21Q9UKJ8 722 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 ZNF148Q9UQR1 794 aa13.34□□□□□ -0.27
VIPAS39-206ENST00000553888 H0YGN5 161 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 DDHD2O94830 711 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 SDC4P31431 198 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 ADCY8P40145 1251 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 RAB27AP51159 221 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 ITGA8P53708 1063 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 DRG2P55039 364 aaKnown RBP13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 GDF10P55107 478 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 OTUD4Q01804 1114 aaKnown RBP13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 PLCB3Q01970 1234 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 PTK6Q13882 451 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 CEP85LQ5SZL2 805 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 ALS2CLQ60I27 953 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 ACTL9Q8TC94 416 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 SLCO2A1Q92959 643 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 ART4Q93070 314 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 FAM149B1Q96BN6 582 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 SEMA4AQ9H3S1 761 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 TMLHEQ9NVH6 421 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 HCSTQ9UBK5 93 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 NFS1Q9Y697 457 aa13.33□□□□□ -0.27
VIPAS39-206ENST00000553888 ARVCFO00192 962 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 PRPSAP2O60256 369 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 SHBGP04278 402 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 NPR3P17342 541 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 CETN2P41208 172 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 GATMP50440 423 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 ADCY1Q08828 1119 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 GPNMBQ14956 572 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 TCTN1Q2MV58 587 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 SMYD5Q6GMV2 418 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 CCDC33Q8N5R6 958 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 CMASQ8NFW8 434 aaPredicted RBP13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 SMOQ99835 787 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 CENPHQ9H3R5 247 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 C9IYK1 514 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 XPO1O14980 1071 aaKnown RBP13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 PPFIA2O75334 1257 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 BCAR1P56945 870 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 FAM35AQ86V20 835 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 SLC43A3Q8NBI5 491 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 ZMIZ2Q8NF64 920 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 STK32AQ8WU08 396 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 LRRC45Q96CN5 670 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 TBCBQ99426 244 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 SNRNP25Q9BV90 132 aaKnown RBP13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 TRAIPQ9BWF2 469 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 LCMT1Q9UIC8 334 aa13.33□□□□□ -0.28
VIPAS39-206ENST00000553888 NLRC5Q86WI3 1866 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 PTPRDP23468 1912 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 NRP1O14786 923 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 NBNO60934 754 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 AP1G2O75843 785 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 GAS8O95995 478 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 IFNB1P01574 187 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 KLRC2P26717 231 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 PCK1P35558 622 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 COPS2P61201 443 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 DPYSL3Q14195 570 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 PPP6R3Q5H9R7 873 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 CCDC185Q8N715 623 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 OR10T2Q8NGX3 314 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 RUNDC3BQ96NL0 473 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 DEFB118Q96PH6 123 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 RGS18Q9NS28 235 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 DNAJB4Q9UDY4 337 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 VWA8A3KMH1 1905 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 DPYSL4O14531 572 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 ATF2P15336 505 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms