RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 PTRHD1Q6GMV3 140 aaKnown RBP18.18■□□□□ 0.5
PHRF1-205ENST00000533464 SLC26A11Q86WA9 606 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 GPR63Q9BZJ6 419 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 TAS2R14Q9NYV8 317 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 JCHAINP01591 159 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 ALDH1A3P47895 512 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 ZNF268Q14587 947 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-205ENST00000533464 CNGA3Q16281 694 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 PURBQ96QR8 312 aaKnown RBP18.18■□□□□ 0.5
PHRF1-205ENST00000533464 SHCBP1LQ9BZQ2 653 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 CD274Q9NZQ7 290 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 GLRA3O75311 464 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 DGKIO75912 1065 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 CHRM3P20309 590 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 TKTL1P51854 596 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 GEMP55040 296 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 FAM83EQ2M2I3 478 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 PRUNE1Q86TP1 453 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 CEP70Q8NHQ1 597 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 AENQ8WTP8 325 aaKnown RBP18.18■□□□□ 0.5
PHRF1-205ENST00000533464 DNAJB3Q8WWF6 145 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 SNX5Q9Y5X3 404 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 TCN1P20061 433 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-205ENST00000533464 TNFRSF25Q93038 417 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 LRRC40Q9H9A6 602 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-205ENST00000533464 SLC24A2Q9UI40 661 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 PKP3Q9Y446 797 aa18.18■□□□□ 0.5
PHRF1-205ENST00000533464 TIMM13Q9Y5L4 95 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-205ENST00000533464 LACTBL1A8MY62 500 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 CYP2F1P24903 491 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 BLOC1S5Q8TDH9 187 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 BHMTQ93088 406 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 PORCNQ9H237 461 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 RCCD1A6NED2 376 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 UBA1P22314 1058 aaKnown RBP18.17■□□□□ 0.5
PHRF1-205ENST00000533464 LHX1P48742 406 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 MAP1SQ66K74 1059 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-205ENST00000533464 ABTB1Q969K4 478 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-205ENST00000533464 KCTD10Q9H3F6 313 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 SHOC2Q9UQ13 582 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 SH3BP1Q9Y3L3 701 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 FBXO21O94952 628 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 ALDH7A1P49419 539 aaKnown RBP18.17■□□□□ 0.5
PHRF1-205ENST00000533464 ZRANB3Q5FWF4 1079 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 PCYOX1LQ8NBM8 494 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 SPATA20Q8TB22 786 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 HSD17B14Q9BPX1 270 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 DNAJC18Q9H819 358 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-205ENST00000533464 AAR2Q9Y312 384 aaKnown RBP18.17■□□□□ 0.5
PHRF1-205ENST00000533464 ZBTB22O15209 634 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 STRNO43815 780 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 RHOBTB1O94844 696 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 ADORA2AP29274 412 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 GTF2BQ00403 316 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 CAPRIN2Q6IMN6 1127 aaKnown RBP18.17■□□□□ 0.5
PHRF1-205ENST00000533464 C16orf89Q6UX73 402 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 RFWD2Q8NHY2 731 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 ETNPPLQ8TBG4 499 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 BAP1Q92560 729 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 COLEC11Q9BWP8 271 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 ILKAPQ9H0C8 392 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-205ENST00000533464 RUBCNLQ9H714 662 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 UBIAD1Q9Y5Z9 338 aa18.17■□□□□ 0.5
PHRF1-205ENST00000533464 CASTOR2A6NHX0 329 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 NKRFO15226 690 aaKnown RBP eCLIP18.16■□□□□ 0.5
PHRF1-205ENST00000533464 ITGB5P18084 799 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 ZNF844Q08AG5 666 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 INPP5AQ14642 412 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 TRIP10Q15642 601 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 SPATA31C1P0DKV0 1188 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 ACAT1P24752 427 aaKnown RBP18.16■□□□□ 0.5
PHRF1-205ENST00000533464 ITIH4Q14624 930 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 SLC27A1Q6PCB7 646 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 DDX53Q86TM3 631 aaKnown RBP18.16■□□□□ 0.5
PHRF1-205ENST00000533464 C4orf32Q8N8J7 132 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 CATSPER1Q8NEC5 780 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 IL31RAQ8NI17 732 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 FBXO32Q969P5 355 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 GANQ9H2C0 597 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 GDF3Q9NR23 364 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 ZNF212Q9UDV6 495 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 KDM4FA0A1W2PPD8 638 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 ADRB2P07550 413 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 MAP4P27816 1152 aaKnown RBP18.16■□□□□ 0.5
PHRF1-205ENST00000533464 RGS4P49798 205 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 GPC2Q8N158 579 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 DDX43Q9NXZ2 648 aaKnown RBP18.16■□□□□ 0.5
PHRF1-205ENST00000533464 CYP39A1Q9NYL5 469 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 STX7O15400 261 aaKnown RBP18.16■□□□□ 0.5
PHRF1-205ENST00000533464 MICAL2O94851 1124 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 NUMBP49757 651 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 MED21Q13503 144 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 CRY2Q49AN0 593 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 POTEAQ6S8J7 498 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 SCUBE3Q8IX30 993 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 DCDC2Q9UHG0 476 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 PCDHB8Q9UN66 801 aa18.16■□□□□ 0.5
PHRF1-205ENST00000533464 RICTORQ6R327 1708 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms