RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 MMS19Q96T76 1030 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 TCHPQ9BT92 498 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 SLC25A18Q9H1K4 315 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 TM9SF3Q9HD45 589 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 ASCL3Q9NQ33 180 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 VPS54Q9P1Q0 977 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 DDX25Q9UHL0 483 aaKnown RBP3.51□□□□□ -1.85
CHD1-211ENST00000514344 VAV3Q9UKW4 847 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 MED13LQ71F56 2210 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 ANKHD1Q8IWZ3 2542 aaKnown RBP3.51□□□□□ -1.85
CHD1-211ENST00000514344 M0QZQ0 153 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 LEFTY2O00292 366 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 TRAK2O60296 914 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 PPFIA2O75334 1257 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 TULP3O75386 442 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 MT-CO3P00414 261 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 ABL1P00519 1130 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 C1SP09871 688 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 CDK4P11802 303 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 ADD1P35611 737 aaKnown RBP3.51□□□□□ -1.85
CHD1-211ENST00000514344 LIFRP42702 1097 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 TNFRSF4P43489 277 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 RARRES1P49788 294 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 ERVPABLB-1P60509 514 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 RPL10AP62906 217 aaKnown RBP3.51□□□□□ -1.85
CHD1-211ENST00000514344 PPP2R5CQ13362 524 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 TEAD4Q15561 434 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 ANO4Q32M45 955 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 Q4G0T1 1027 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 SGO2Q562F6 1265 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 ALKAL1Q6UXT8 129 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 LRRTM3Q86VH5 581 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 TICAM2Q86XR7 235 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 LSMEM2Q8N112 164 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 TERB1Q8NA31 727 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 CADM4Q8NFZ8 388 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 DEPTORQ8TB45 409 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 CCDC12Q8WUD4 166 aaPredicted RBP3.51□□□□□ -1.85
CHD1-211ENST00000514344 BSNDQ8WZ55 320 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 BHMTQ93088 406 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 CCNL2Q96S94 520 aaPredicted RBP3.51□□□□□ -1.85
CHD1-211ENST00000514344 CDT1Q9H211 546 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 C6orf106Q9H6K1 298 aaPredicted RBP3.51□□□□□ -1.85
CHD1-211ENST00000514344 RPF1Q9H9Y2 349 aaKnown RBP3.51□□□□□ -1.85
CHD1-211ENST00000514344 CD248Q9HCU0 757 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 RBM28Q9NW13 759 aaKnown RBP3.51□□□□□ -1.85
CHD1-211ENST00000514344 DEC1Q9P2X7 70 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 NFE2L3Q9Y4A8 694 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 PPME1Q9Y570 386 aa3.51□□□□□ -1.85
CHD1-211ENST00000514344 KIF26BQ2KJY2 2108 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 DCHS2Q6V1P9 2916 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 TP53BP1Q12888 1972 aaPredicted RBP3.5□□□□□ -1.85
CHD1-211ENST00000514344 VPS37CA5D8V6 355 aaPredicted RBP3.5□□□□□ -1.85
CHD1-211ENST00000514344 GOLGA8AA7E2F4 631 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 GOLGA8BA8MQT2 603 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 PPEF2O14830 753 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 ZBTB43O43298 467 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 PRPF40AO75400 957 aaKnown RBP3.5□□□□□ -1.85
CHD1-211ENST00000514344 SLITRK3O94933 977 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 ADH1CP00326 375 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 CENPBP07199 599 aaPredicted RBP3.5□□□□□ -1.85
CHD1-211ENST00000514344 RNF224P0DH78 156 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 ACSL1P33121 698 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 MYBPC2Q14324 1141 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 TGIF1Q15583 401 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 FAM187BQ17R55 369 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 FUT11Q495W5 492 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 NT5DC1Q5TFE4 455 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 BTBD8Q5XKL5 378 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 CDCA2Q69YH5 1023 aaPredicted RBP3.5□□□□□ -1.85
CHD1-211ENST00000514344 TMEM206Q9H813 350 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 POLR1BQ9H9Y6 1135 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 TMPRSS4Q9NRS4 437 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 ADAMTS1Q9UHI8 967 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 BRPF3Q9ULD4 1205 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 SATB2Q9UPW6 733 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 PCDHB6Q9Y5E3 794 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 ANAPC1Q9H1A4 1944 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 A0A1B0GTQ1 180 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 PMS2P1A4D2B8 440 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 FAM47DPA6NHR8 397 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 PRRT4C9JH25 899 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 SDC3O75056 442 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 FSBPO95073 299 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 NFICP08651 508 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 CSH1P0DML2 217 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 CSH2P0DML3 217 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 HAPLN1P10915 354 aaPredicted RBP3.5□□□□□ -1.85
CHD1-211ENST00000514344 ACADMP11310 421 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 EIF2DP41214 584 aaKnown RBP3.5□□□□□ -1.85
CHD1-211ENST00000514344 GRM5P41594 1212 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 GRIA4P48058 902 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 PSEN1P49768 467 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 C21orf59P57076 290 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 BNIP3Q12983 259 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 XKR4Q5GH76 650 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 ADGRD1Q6QNK2 874 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 TMPRSS6Q8IU80 811 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 PHTF2Q8N3S3 785 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 FSIP1Q8NA03 581 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms