RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 PITPNM3Q9BZ71 974 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 SETD4Q9NVD3 440 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 XPO7Q9UIA9 1087 aaKnown RBP11.45□□□□□ -0.58
SEC31A-228ENST00000509142 IKBKGQ9Y6K9 419 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 SLC8A1P32418 973 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 NRLP54845 237 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 PLEKHG4Q58EX7 1191 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 HHATQ5VTY9 493 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 FAM183BPQ6ZVS7 135 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
SEC31A-228ENST00000509142 ZNF276Q8N554 614 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 CMASQ8NFW8 434 aaPredicted RBP11.45□□□□□ -0.58
SEC31A-228ENST00000509142 VRTNQ9H8Y1 702 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 SNTG2Q9NY99 539 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 KLHL14Q9P2G3 628 aa11.45□□□□□ -0.58
SEC31A-228ENST00000509142 NKX1-2Q9UD57 310 aaPredicted RBP11.45□□□□□ -0.58
SEC31A-228ENST00000509142 A0A1B0GUA9 196 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 STRNO43815 780 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 SSTR1P30872 391 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 SDC4P31431 198 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 MSH2P43246 934 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 SNX16P57768 344 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 STILQ15468 1287 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 DGKDQ16760 1214 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 SYCP2LQ5T4T6 812 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 SH3PXD2AQ5TCZ1 1133 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 ANKRD22Q5VYY1 191 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 CPT1BQ92523 772 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 C16orf70Q9BSU1 422 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 GCOM2Q9BZD3 368 aaPredicted RBP11.44□□□□□ -0.58
SEC31A-228ENST00000509142 HEY1Q9Y5J3 304 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 CLUHO75153 1309 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 COL1A2P08123 1366 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 TYROBPO43914 113 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 PCK1P35558 622 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 SPARCL1Q14515 664 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 GLRA4Q5JXX5 417 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 SMYD5Q6GMV2 418 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 LCLAT1Q6UWP7 414 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 NPNTQ6UXI9 565 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 NT5DC4Q86YG4 428 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 PLCD4Q9BRC7 762 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 SENP1Q9P0U3 644 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 PSMC3IPQ9P2W1 217 aaPredicted RBP11.44□□□□□ -0.58
SEC31A-228ENST00000509142 C15orf41Q9Y2V0 281 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 UNC5CO95185 931 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 EZRP15311 586 aaKnown RBP11.44□□□□□ -0.58
SEC31A-228ENST00000509142 GABRB2P47870 512 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 ACVR2BQ13705 512 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 DCAF4L1Q3SXM0 396 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 FBXO36Q8NEA4 188 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 BEST2Q8NFU1 509 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 PPP1R13LQ8WUF5 828 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 UBN1Q9NPG3 1134 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 RNF19AQ9NV58 838 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 GPATCH2LQ9NWQ4 482 aa11.44□□□□□ -0.58
SEC31A-228ENST00000509142 TCRBV7S3A2A0A539 114 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 STIP1P31948 543 aaKnown RBP11.43□□□□□ -0.58
SEC31A-228ENST00000509142 GEMIN4P57678 1058 aaKnown RBP11.43□□□□□ -0.58
SEC31A-228ENST00000509142 PPP6R3Q5H9R7 873 aaPredicted RBP11.43□□□□□ -0.58
SEC31A-228ENST00000509142 ZNF410Q86VK4 478 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 SESTD1Q86VW0 696 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 GIMAP7Q8NHV1 300 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 FAF2Q96CS3 445 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 SLC7A6OSQ96CW6 309 aaPredicted RBP11.43□□□□□ -0.58
SEC31A-228ENST00000509142 KANSL3Q9P2N6 904 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 SLC24A2Q9UI40 661 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 PHTF1Q9UMS5 762 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 KAT6AQ92794 2004 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 A8MXQ7 604 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 GRM5P41594 1212 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 BCAR1P56945 870 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 FAM47CQ5HY64 1035 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 FNBP1LQ5T0N5 605 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 PPP1R26Q5T8A7 1209 aaPredicted RBP11.43□□□□□ -0.58
SEC31A-228ENST00000509142 SCUBE3Q8IX30 993 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 PPCSQ9HAB8 311 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 SMG5Q9UPR3 1016 aaKnown RBP11.43□□□□□ -0.58
SEC31A-228ENST00000509142 HES2Q9Y543 173 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 A0A0G2JMZ2 1700 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 C2CD4BA6NLJ0 364 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 BTBD19C9JJ37 291 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 DYNC1LI2O43237 492 aaPredicted RBP11.43□□□□□ -0.58
SEC31A-228ENST00000509142 TARSP26639 723 aaKnown RBP11.43□□□□□ -0.58
SEC31A-228ENST00000509142 YWHAGP61981 247 aaKnown RBP eCLIP11.43□□□□□ -0.58
SEC31A-228ENST00000509142 INCA1Q0VD86 236 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 DPYSL3Q14195 570 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 KLHL38Q2WGJ6 581 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 BOLA3Q53S33 107 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 RPAINQ86UA6 219 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 LRRC8CQ8TDW0 803 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 MIEF2Q96C03 454 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 MRPL45Q9BRJ2 306 aaKnown RBP11.43□□□□□ -0.58
SEC31A-228ENST00000509142 CYLDQ9NQC7 956 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 CHMP2BQ9UQN3 213 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 MGAMO43451 1857 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 LOC285556D6RIA3 1793 aa11.43□□□□□ -0.58
SEC31A-228ENST00000509142 DIAPH2O60879 1101 aa11.42□□□□□ -0.58
SEC31A-228ENST00000509142 SNAI1O95863 264 aaPredicted RBP11.42□□□□□ -0.58
SEC31A-228ENST00000509142 NEFHP12036 1026 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms