RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CADM4Q8NFZ8 388 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 C2orf15Q8WU43 125 aaKnown RBP7.77□□□□□ -1.17
VCAN-207ENST00000507162 IGSF8Q969P0 613 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 ZBTB45Q96K62 511 aaPredicted RBP7.77□□□□□ -1.17
VCAN-207ENST00000507162 ZNF578Q96N58 590 aaPredicted RBP7.77□□□□□ -1.17
VCAN-207ENST00000507162 PSMG3-AS1Q96PY0 264 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 PTPRHQ9HD43 1115 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 SH3GLB2Q9NR46 395 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 SMPD4Q9NXE4 827 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 GCNT4Q9P109 453 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 DEC1Q9P2X7 70 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 HCN2Q9UL51 889 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 PCDHA12Q9UN75 941 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 ARHGAP26Q9UNA1 814 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 CLCA2Q9UQC9 943 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 NFE2L3Q9Y4A8 694 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 PCDHB6Q9Y5E3 794 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 SLCO1B1Q9Y6L6 691 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 MYLKQ15746 1914 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 RP1L1Q8IWN7 2480 aaPredicted RBP7.76□□□□□ -1.17
VCAN-207ENST00000507162 WASH3PC4AMC7 463 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 K7ENP7 123 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 RIOK3O14730 519 aaKnown RBP7.76□□□□□ -1.17
VCAN-207ENST00000507162 SLC9A3R1O14745 358 aaPredicted RBP7.76□□□□□ -1.17
VCAN-207ENST00000507162 TRIM24O15164 1050 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 ABL1P00519 1130 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 CXCL8P10145 99 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 GSPT1P15170 499 aaKnown RBP7.76□□□□□ -1.17
VCAN-207ENST00000507162 CYP11B2P19099 503 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 LRPAP1P30533 357 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 MATR3P43243 847 aaKnown RBP eCLIP7.76□□□□□ -1.17
VCAN-207ENST00000507162 AARSP49588 968 aaKnown RBP eCLIP7.76□□□□□ -1.17
VCAN-207ENST00000507162 LILRA4P59901 499 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 GAD2Q05329 585 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 IGFBP7Q16270 282 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 KCNT1Q5JUK3 1230 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 INO80CQ6PI98 192 aaPredicted RBP7.76□□□□□ -1.17
VCAN-207ENST00000507162 CCDC81Q6ZN84 652 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 FAM124AQ86V42 546 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 EID2Q8N6I1 236 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 HIC2Q96JB3 615 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 MRPL4Q9BYD3 311 aaKnown RBP7.76□□□□□ -1.17
VCAN-207ENST00000507162 DPH1Q9BZG8 443 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 RWDD1Q9H446 243 aaPredicted RBP7.76□□□□□ -1.17
VCAN-207ENST00000507162 ITM2CQ9NQX7 267 aa7.76□□□□□ -1.17
VCAN-207ENST00000507162 UBQLN1Q9UMX0 589 aaKnown RBP7.76□□□□□ -1.17
VCAN-207ENST00000507162 ARHGEF35A5YM69 484 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 KCNJ18B7U540 433 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 M0R2N6 131 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 LAD1O00515 517 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 CYB561D2O14569 222 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 TULP3O75386 442 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 MT-CO3P00414 261 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 ITGAVP06756 1048 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 TCF3P15923 654 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 GCFC2P16383 781 aaKnown RBP7.75□□□□□ -1.17
VCAN-207ENST00000507162 ABCB4P21439 1286 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 CYP2F1P24903 491 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 TXKP42681 527 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 ACADVLP49748 655 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 RPL10AP62906 217 aaKnown RBP7.75□□□□□ -1.17
VCAN-207ENST00000507162 GABREP78334 506 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 SMARCB1Q12824 385 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 SAFBQ15424 915 aaKnown RBP eCLIP7.75□□□□□ -1.17
VCAN-207ENST00000507162 ANO4Q32M45 955 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 TTC22Q5TAA0 569 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 MPZL3Q6UWV2 235 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 SCN4BQ8IWT1 228 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 SMC5Q8IY18 1101 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 LSMEM2Q8N112 164 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 PHTF2Q8N3S3 785 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 C1orf216Q8TAB5 229 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 SNRNP27Q8WVK2 155 aaKnown RBP7.75□□□□□ -1.17
VCAN-207ENST00000507162 NUP58Q9BVL2 599 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 RNF26Q9BY78 433 aaPredicted RBP7.75□□□□□ -1.17
VCAN-207ENST00000507162 LSG1Q9H089 658 aaKnown RBP7.75□□□□□ -1.17
VCAN-207ENST00000507162 STARD5Q9NSY2 213 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 TMLHEQ9NVH6 421 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 CFAP97Q9P2B7 532 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 PCDHB1Q9Y5F3 818 aa7.75□□□□□ -1.17
VCAN-207ENST00000507162 DENND4CQ5VZ89 1909 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 LACTBL1A8MY62 500 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 XPOTO43592 962 aaKnown RBP7.74□□□□□ -1.17
VCAN-207ENST00000507162 NOL4O94818 638 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 ACADMP11310 421 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 POU3F2P20265 443 aaPredicted RBP7.74□□□□□ -1.17
VCAN-207ENST00000507162 CYP3A5P20815 502 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 OXTRP30559 389 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 GRIK1P39086 918 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 PDE6CP51160 858 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 TPMTP51580 245 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 RCAN1P53805 252 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 C21orf59P57076 290 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 CCT2P78371 535 aaKnown RBP7.74□□□□□ -1.17
VCAN-207ENST00000507162 TSPY1Q01534 308 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 NECTIN1Q15223 517 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 ZSCAN23Q3MJ62 389 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 LINC00303Q3SY05 128 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 SGO2Q562F6 1265 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 WSCD1Q658N2 575 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms