RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 C3orf70A6NLC5 250 aaPredicted RBP8.43□□□□□ -1.06
COL4A5-208ENST00000505728 DAPK3O43293 454 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 HOXA2O43364 376 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 PRPSAP2O60256 369 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 NBNO60934 754 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 ATP2C2O75185 946 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 GAS8O95995 478 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 TCF4P15884 667 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 IGFBP6P24592 240 aaPredicted RBP8.43□□□□□ -1.06
COL4A5-208ENST00000505728 ACAT1P24752 427 aaKnown RBP8.43□□□□□ -1.06
COL4A5-208ENST00000505728 IL1R2P27930 398 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 TKTP29401 623 aaKnown RBP8.43□□□□□ -1.06
COL4A5-208ENST00000505728 FLT3P36888 993 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 HSPA9P38646 679 aaKnown RBP8.43□□□□□ -1.06
COL4A5-208ENST00000505728 DSC1Q08554 894 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 HLTFQ14527 1009 aaKnown RBP eCLIP8.43□□□□□ -1.06
COL4A5-208ENST00000505728 PDK2Q15119 407 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 SHHQ15465 462 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 TRIM60Q495X7 471 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 MDH1BQ5I0G3 518 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 C9orf50Q5SZB4 431 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 KIAA0319Q5VV43 1072 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 TXNRD3NBQ6F5E7 133 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 TRNP1Q6NT89 227 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 TTC27Q6P3X3 843 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 CLEC20AQ6ZU45 233 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 STRADAQ7RTN6 431 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 PIGZQ86VD9 579 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 MAP7D3Q8IWC1 876 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 SCUBE3Q8IX30 993 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 GSPT2Q8IYD1 628 aaKnown RBP8.43□□□□□ -1.06
COL4A5-208ENST00000505728 COLGALT2Q8IYK4 626 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 KCTD6Q8NC69 237 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 MYCBPAPQ8TBZ2 947 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 TEKT4Q8WW24 435 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 C1orf54Q8WWF1 131 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 LINC01599Q8WXQ3 324 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 RAPGEF5Q92565 580 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 CENPIQ92674 756 aaPredicted RBP8.43□□□□□ -1.06
COL4A5-208ENST00000505728 TOX2Q96NM4 488 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 FAM193BQ96PV7 902 aaPredicted RBP8.43□□□□□ -1.06
COL4A5-208ENST00000505728 LBHD1Q9BQE6 289 aaPredicted RBP8.43□□□□□ -1.06
COL4A5-208ENST00000505728 HEMGNQ9BXL5 484 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 B3GNT5Q9BYG0 378 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 PLEKHA4Q9H4M7 779 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 CHST7Q9NS84 486 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.43□□□□□ -1.063e-6■■■■□ 22.8
COL4A5-208ENST00000505728 PCDHB8Q9UN66 801 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 PCDHB7Q9Y5E2 793 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 REV3LO60673 3130 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 GBF1Q92538 1859 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 MYBPHLA2RUH7 354 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 TRIM43BA6NCK2 446 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 SPDYE4A6NLX3 237 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 DCDC2CA8MYV0 355 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 ZNF487B1APH4 448 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 PI4K2BG5E9Z4 385 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 PIK3R2O00459 728 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 TRAPPC3O43617 180 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 HSF2BPO75031 334 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 AP1G2O75843 785 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 CXCL10P02778 98 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 LCP1P13796 627 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 ITIH2P19823 946 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 IBSPP21815 317 aaPredicted RBP8.42□□□□□ -1.06
COL4A5-208ENST00000505728 ITGB8P26012 769 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 ECHS1P30084 290 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 BRCC3P46736 316 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 KCNJ1P48048 391 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 ARSEP51690 589 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 MRPS5P82675 430 aaKnown RBP8.42□□□□□ -1.06
COL4A5-208ENST00000505728 TSPY1Q01534 308 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 SNX1Q13596 522 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 MTMR3Q13615 1198 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 PTK6Q13882 451 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 GPNMBQ14956 572 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 PPP1R7Q15435 360 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 TRADDQ15628 312 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 INTS6LQ5JSJ4 861 aaKnown RBP8.42□□□□□ -1.06
COL4A5-208ENST00000505728 CLLU1OSQ5K130 101 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 SPDYCQ5MJ68 293 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 C1orf53Q5VUE5 145 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 KAZNQ674X7 775 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 FAM109BQ6ICB4 259 aaPredicted RBP8.42□□□□□ -1.06
COL4A5-208ENST00000505728 OVOS1Q6IE37 1185 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 POTEHQ6S545 545 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 BBS12Q6ZW61 710 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 ANKRD33Q7Z3H0 272 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 ANKS1BQ7Z6G8 1248 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 FAM35AQ86V20 835 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 DDX42Q86XP3 938 aaKnown RBP eCLIP8.42□□□□□ -1.06
COL4A5-208ENST00000505728 SCML4Q8N228 414 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 BBOF1Q8ND07 529 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 DBF4BQ8NFT6 615 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 CCHCR1Q8TD31 782 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 BADQ92934 168 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 TRIM43Q96BQ3 446 aaPredicted RBP8.42□□□□□ -1.06
COL4A5-208ENST00000505728 SMARCD1Q96GM5 515 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 PKNOX2Q96KN3 472 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 FAM161BQ96MY7 647 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms