RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PRG3Q9Y2Y8 225 aaPredicted RBP9.15□□□□□ -0.95
LSAMP-205ENST00000490035 AXLP30530 894 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 CCT8P50990 548 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 SCUBE1Q8IWY4 988 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 NUP93Q8N1F7 819 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 BSNDQ8WZ55 320 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 REPS1Q96D71 796 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 GJD4Q96KN9 370 aaPredicted RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 AGAP3Q96P47 875 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 WDR41Q9HAD4 459 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 COMMD8Q9NX08 183 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 WWOXQ9NZC7 414 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 TRHDEQ9UKU6 1024 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 FAM47E-STBD1D6RA91 191 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 EPS8Q12929 822 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 ZCWPW2Q504Y3 356 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 LRRC39Q96DD0 335 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 CHAMP1Q96JM3 812 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 PCDH9Q9HC56 1237 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 TRPC7Q9HCX4 862 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 RGS18Q9NS28 235 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 GJB4Q9NTQ9 266 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 UBA2Q9UBT2 640 aaPredicted RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 SRRM3A6NNA2 597 aaPredicted RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 PPP1R3GB7ZBB8 358 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 GRTP1Q5TC63 336 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 ERO1BQ86YB8 467 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 LBHD1Q9BQE6 289 aaPredicted RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 KBTBD4Q9NVX7 518 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 PTPRMP28827 1452 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 STK25O00506 426 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 PON1P27169 355 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 CAPZA2P47755 286 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 RAB27AP51159 221 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 STK4Q13043 487 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 ITIH5Q86UX2 942 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 C8orf4Q9NR00 106 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 CENPXA8MT69 81 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 VCAM1P19320 739 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 PTPN21Q16825 1174 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 MYO1HQ8N1T3 1032 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 VAT1Q99536 393 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 NUDT12Q9BQG2 462 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 ZCCHC2Q9C0B9 1178 aaKnown RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 RPS6KL1Q9Y6S9 549 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 C17orf102A2RUQ5 167 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 CAND2O75155 1236 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 NPM3O75607 178 aaKnown RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 MYBP10242 640 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 ALOX15P16050 662 aaPredicted RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 HMGCS2P54868 508 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 ITGA1P56199 1179 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 FMR1Q06787 632 aaKnown RBP eCLIP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 BFSP2Q13515 415 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 KIZQ2M2Z5 673 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 PCNX4Q63HM2 1172 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 MICU2Q8IYU8 434 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 OTULINQ96BN8 352 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 HIC2Q96JB3 615 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 KCNH7Q9NS40 1196 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 MYO1GB0I1T2 1018 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 F8W810 466 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF185O15231 689 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 CNOT3O75175 753 aaKnown RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 SUPT20HL2P0C7V6 817 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 ALDH7A1P49419 539 aaKnown RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 EZH2Q15910 746 aaKnown RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF669Q96BR6 464 aaPredicted RBP9.14□□□□□ -0.95
LSAMP-205ENST00000490035 KIDINS220Q9ULH0 1771 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 CEP78Q5JTW2 689 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 SPANXN3Q5MJ09 141 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 SLC26A11Q86WA9 606 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 CROCCP3Q8IVE0 287 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 SETD9Q8NE22 299 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 DLG3Q92796 817 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 FAM192AQ9GZU8 254 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 IQSEC2Q5JU85 1478 aa9.14□□□□□ -0.95
LSAMP-205ENST00000490035 PP2D1A8MPX8 630 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 LRG1P02750 347 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 MMRN1Q13201 1228 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 WASHC2DQ5SRD0 308 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 SCARA3Q6AZY7 606 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 IYDQ6PHW0 289 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 ZFYVE19Q96K21 471 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 CLPBQ9H078 707 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 SAR1AQ9NR31 198 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 SPASTQ9UBP0 616 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 HACL1Q9UJ83 578 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 USP18Q9UMW8 372 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 GTF2A2P52657 109 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 ATXN3P54252 364 aaPredicted RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 ZRANB3Q5FWF4 1079 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 MPZL3Q6UWV2 235 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 BNC2Q6ZN30 1099 aaPredicted RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 CENPLQ8N0S6 344 aaPredicted RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 MAGEC3Q8TD91 643 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 JMJD4Q9H9V9 463 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 PAPOLBQ9NRJ5 636 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms