RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 TDP1Q9NUW8 608 aa3.76□□□□□ -1.81
PRPF4-203ENST00000488937 RIC8BQ9NVN3 520 aa3.76□□□□□ -1.81
PRPF4-203ENST00000488937 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.76□□□□□ -1.81
PRPF4-203ENST00000488937 TBC1D14Q9P2M4 693 aa3.76□□□□□ -1.81
PRPF4-203ENST00000488937 KNSTRNQ9Y448 316 aa3.76□□□□□ -1.81
PRPF4-203ENST00000488937 PCDHB6Q9Y5E3 794 aa3.76□□□□□ -1.81
PRPF4-203ENST00000488937 PCDHGB5Q9Y5G0 923 aa3.76□□□□□ -1.81
PRPF4-203ENST00000488937 PCDHA1Q9Y5I3 950 aa3.76□□□□□ -1.81
PRPF4-203ENST00000488937 ZFP37Q9Y6Q3 630 aaPredicted RBP3.76□□□□□ -1.81
PRPF4-203ENST00000488937 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.75□□□□□ -1.81
PRPF4-203ENST00000488937 CCDC78A2IDD5 438 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 TRIM64CA6NLI5 447 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 H0Y3Z8 333 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 BTN3A1O00481 513 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 ENDOD1O94919 500 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 TGDSO95455 350 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 MPIG6BO95866 241 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 F9P00740 461 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 CLEC3BP05452 202 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 CSH1P0DML2 217 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 CSH2P0DML3 217 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 TXNP10599 105 aaKnown RBP3.75□□□□□ -1.81
PRPF4-203ENST00000488937 KLRC1P26715 233 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 CTGFP29279 349 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 AARSP49588 968 aaKnown RBP eCLIP3.75□□□□□ -1.81
PRPF4-203ENST00000488937 RGS3P49796 1198 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 ATP8B2P98198 1209 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 GRIN1Q05586 938 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 EPS8Q12929 822 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 NOMO1Q15155 1222 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 TMTC4Q5T4D3 741 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 PAPD7Q5XG87 772 aaKnown RBP3.75□□□□□ -1.81
PRPF4-203ENST00000488937 ATG16L1Q676U5 607 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 NAA16Q6N069 864 aaPredicted RBP3.75□□□□□ -1.81
PRPF4-203ENST00000488937 TCTN3Q6NUS6 607 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 TRMT10BQ6PF06 316 aaKnown RBP3.75□□□□□ -1.81
PRPF4-203ENST00000488937 USP49Q70CQ1 688 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 SZRD1Q7Z422 152 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 PXKQ7Z7A4 578 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 EPHX4Q8IUS5 362 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 RTKN2Q8IZC4 609 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 GALNT4Q8N4A0 578 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 DCBLD1Q8N8Z6 715 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 DTX3Q8N9I9 347 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 USP38Q8NB14 1042 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 AVL9Q8NBF6 648 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 SLC22A17Q8WUG5 538 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 FAM120BQ96EK7 910 aaKnown RBP3.75□□□□□ -1.81
PRPF4-203ENST00000488937 LRRC46Q96FV0 321 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 FAM89AQ96GI7 184 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 FEM1CQ96JP0 617 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 CNDP2Q96KP4 475 aaKnown RBP3.75□□□□□ -1.81
PRPF4-203ENST00000488937 SPATA17Q96L03 361 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 MXD3Q9BW11 206 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 KRTAP1-5Q9BYS1 174 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 MTG2Q9H4K7 406 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 SYNCQ9H7C4 482 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 ACAD9Q9H845 621 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 ERVK-5Q9HDB9 667 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 RXFP3Q9NSD7 469 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 PDRG1Q9NUG6 133 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 TRMT1Q9NXH9 659 aaKnown RBP3.75□□□□□ -1.81
PRPF4-203ENST00000488937 RPS6KA6Q9UK32 745 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 CROTQ9UKG9 612 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 CA14Q9ULX7 337 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 CAPN11Q9UMQ6 739 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 PCDHGB4Q9UN71 923 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 CLCA2Q9UQC9 943 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 DTNAQ9Y4J8 743 aa3.75□□□□□ -1.81
PRPF4-203ENST00000488937 PYCARD-AS1I3L0S3 204 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 F2RL2O00254 374 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 RTCAO00442 366 aaKnown RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 FCHO1O14526 889 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 CPLX1O14810 134 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 PCDH17O14917 1159 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 FOXS1O43638 330 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 CSPG5O95196 566 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 GOSR1O95249 250 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 MATN4O95460 622 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 CHGBP05060 677 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 QDPRP09417 244 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 CKBP12277 381 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 HDCP19113 662 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 ATP5DP30049 168 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 KIF5BP33176 963 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 NNMTP40261 264 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 CD86P42081 329 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 MLLT6P55198 1093 aaPredicted RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 SOX8P57073 446 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 TMF1P82094 1093 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 MC1RQ01726 317 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 MEF2AQ02078 507 aaPredicted RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 GALNT2Q10471 571 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 MAP3K12Q12852 859 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 SLC13A2Q13183 592 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 ASIC2Q16515 512 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 KRTCAP3Q53RY4 240 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 TTC22Q5TAA0 569 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 NAA35Q5VZE5 725 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms