RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 MAFO75444 373 aaPredicted RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 FAM155BO75949 473 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 USP1O94782 785 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 PLATP00750 562 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 AHSGP02765 367 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 ADRB2P07550 413 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 ITGA5P08648 1049 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 IDEP14735 1019 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 RPL13P26373 211 aaKnown RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 CARSP49589 748 aaKnown RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 CTCFP49711 727 aaPredicted RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 FLT3LGP49771 235 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 RGS3P49796 1198 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 CCR9P51686 369 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 ZNF131P52739 623 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 PNLIPRP1P54315 467 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 BPIFB3P59826 476 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 IFI35P80217 286 aaPredicted RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 CHRNDQ07001 517 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 TARDBPQ13148 414 aaKnown RBP eCLIP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 RASA2Q15283 850 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 UBE3CQ15386 1083 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 SLFN12LQ6IEE8 588 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 RPUSD3Q6P087 351 aaKnown RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 RNF44Q7L0R7 432 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 RTL10Q7L3V2 364 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 R3HCC1LQ7Z5L2 792 aaKnown RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 RSPH3Q86UC2 560 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 TTLL6Q8N841 843 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 TXNDC5Q8NBS9 432 aaKnown RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 MSANTD4Q8NCY6 345 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 CHST13Q8NET6 341 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 APPL2Q8NEU8 664 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 CEP70Q8NHQ1 597 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 SEC14L1Q92503 715 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 MAML1Q92585 1016 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 SUCLG2Q96I99 432 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 TMX3Q96JJ7 454 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 CNDP2Q96KP4 475 aaKnown RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 RBM15Q96T37 977 aaKnown RBP eCLIP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 GDF15Q99988 308 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 PDCD2LQ9BRP1 358 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 GPATCH1Q9BRR8 931 aaKnown RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 CXorf56Q9H5V9 222 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 ACAD9Q9H845 621 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 ZWILCHQ9H900 591 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 PCDH18Q9HCL0 1135 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 PIH1D1Q9NWS0 290 aaKnown RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 TMOD4Q9NZQ9 345 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 SCOCQ9UIL1 159 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 ZNF711Q9Y462 761 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 ARHGEF28Q8N1W1 1705 aaKnown RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 SOS1Q07889 1333 aaPredicted RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 RGPD5Q99666 1765 aa3.6□□□□□ -1.83
ZNF561-216ENST00000483768 BRD4O60885 1362 aaPredicted RBP3.6□□□□□ -1.83
ZNF561-216ENST00000483768 CCDC196A0A1B0GTZ2 297 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 RTCAO00442 366 aaKnown RBP3.59□□□□□ -1.83
ZNF561-216ENST00000483768 CLGNO14967 610 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 KRT38O76015 456 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 ACTL6BO94805 426 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 TOMM70O94826 608 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 TGDSO95455 350 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 SGPL1O95470 568 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 PRLP01236 227 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 GCP02774 474 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 CYP1A1P04798 512 aaPredicted RBP3.59□□□□□ -1.83
ZNF561-216ENST00000483768 ITGA2BP08514 1039 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 ZNF20P17024 532 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 HDCP19113 662 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 MALP21145 153 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 CHMP24386 653 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 ABCD3P28288 659 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 CST5P28325 142 aaPredicted RBP3.59□□□□□ -1.83
ZNF561-216ENST00000483768 GABRB3P28472 473 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 ADSLP30566 484 aaPredicted RBP3.59□□□□□ -1.83
ZNF561-216ENST00000483768 GJA4P35212 333 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 AARSP49588 968 aaKnown RBP eCLIP3.59□□□□□ -1.83
ZNF561-216ENST00000483768 MMP14P50281 582 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 ITGA1P56199 1179 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 VAMP2P63027 116 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 PPARDQ03181 441 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 GRIN1Q05586 938 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 EXOSC9Q06265 439 aaKnown RBP3.59□□□□□ -1.83
ZNF561-216ENST00000483768 NEXNQ0ZGT2 675 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 MGAT2Q10469 447 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 LRMPQ12912 555 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 SNAPC2Q13487 334 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 NOLC1Q14978 699 aaKnown RBP eCLIP3.59□□□□□ -1.83
ZNF561-216ENST00000483768 WTAPQ15007 396 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 CTXN3Q4LDR2 81 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 SNX30Q5VWJ9 437 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 CASC1Q6TDU7 716 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 GLB1LQ6UWU2 654 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 GADL1Q6ZQY3 521 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 CATSPERGQ6ZRH7 1159 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 LIMS2Q7Z4I7 341 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.59□□□□□ -1.83
ZNF561-216ENST00000483768 MIB1Q86YT6 1006 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 CEP57L1Q8IYX8 460 aa3.59□□□□□ -1.83
ZNF561-216ENST00000483768 Q8N1Y9 231 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms